Literature DB >> 30315457

High-Throughput Measure of Bioactive Lipids Using Non-targeted Mass Spectrometry.

Kim A Lagerborg1,2, Jeramie D Watrous1,2, Susan Cheng3,4, Mohit Jain5,6.   

Abstract

Bioactive lipids represent critical intra- and intercellular signaling molecules, and have been implicated in both physiologic homeostasis and disease pathology. Measurement of bioactive lipids is vital toward understanding the role of these signaling intermediates in human biology. Current analytical methods for assessment of bioactive lipids in human biosamples are limited, however, in breath of analytes assayed as well as robustness and time required for measures across thousands of samples. Herein, we describe in comprehensive detail a rapid and robust analytical method using liquid chromatography-mass spectrometry (LC-MS) for non-targeted measurement of over 7000 bioactive lipids, including eicosanoids and eicosanoid-related metabolites, in human biosamples. These methods may be applied to the study of population scale cohorts to uncover previously unrecognized roles for bioactive lipid species in human biology.

Entities:  

Keywords:  Bioactive lipids; Eicosanoids; LC-MS; Lipidomics; Mass spectrometry

Mesh:

Substances:

Year:  2019        PMID: 30315457     DOI: 10.1007/978-1-4939-8769-6_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  12 in total

1.  Enhancing fatty acid oxidation negatively regulates PPARs signaling in the heart.

Authors:  ZhengLong Liu; Jeffrey Ding; Timothy S McMillen; Outi Villet; Rong Tian; Dan Shao
Journal:  J Mol Cell Cardiol       Date:  2020-06-24       Impact factor: 5.000

2.  Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows.

Authors:  Kim A Lagerborg; Erica Normandin; Matthew R Bauer; Gordon Adams; Katherine Figueroa; Christine Loreth; Adrianne Gladden-Young; Bennett M Shaw; Leah R Pearlman; Daniel Berenzy; Hannah B Dewey; Susan Kales; Sabrina T Dobbins; Erica S Shenoy; David Hooper; Virginia M Pierce; Kimon C Zachary; Daniel J Park; Bronwyn L MacInnis; Ryan Tewhey; Jacob E Lemieux; Pardis C Sabeti; Steven K Reilly; Katherine J Siddle
Journal:  Nat Microbiol       Date:  2021-12-14       Impact factor: 30.964

3.  Biliopancreatic Diversion Induces Greater Metabolic Improvement Than Roux-en-Y Gastric Bypass.

Authors:  Lydia-Ann Harris; Brandon D Kayser; Consuelo Cefalo; Luca Marini; Jeramie D Watrous; Jeffrey Ding; Mohit Jain; Jeffrey G McDonald; Bonne M Thompson; Elisa Fabbrini; J Christopher Eagon; Bruce W Patterson; Bettina Mittendorfer; Geltrude Mingrone; Samuel Klein
Journal:  Cell Metab       Date:  2019-10-03       Impact factor: 27.287

4.  Nontargeted mass spectrometry of dried blood spots for interrogation of the human circulating metabolome.

Authors:  Casey Ward; Shriram Nallamshetty; Jeramie D Watrous; Eowyn Acres; Tao Long; Ian T Mathews; Sonia Sharma; Susan Cheng; Farhad Imam; Mohit Jain
Journal:  J Mass Spectrom       Date:  2021-05-27       Impact factor: 2.394

5.  DNA spike-ins enable confident interpretation of SARS-CoV-2 genomic data from amplicon-based sequencing.

Authors:  Kim A Lagerborg; Erica Normandin; Matthew R Bauer; Gordon Adams; Katherine Figueroa; Christine Loreth; Adrianne Gladden-Young; Bennett Shaw; Leah Pearlman; Erica S Shenoy; David Hooper; Virginia M Pierce; Kimon C Zachary; Daniel J Park; Bronwyn L MacInnis; Jacob E Lemieux; Pardis C Sabeti; Steven K Reilly; Katherine J Siddle
Journal:  bioRxiv       Date:  2021-03-16

Review 6.  Diverse Roles of TRPV4 in Macrophages: A Need for Unbiased Profiling.

Authors:  Thanh-Nhan Nguyen; Ghizal Siddiqui; Nicholas A Veldhuis; Daniel P Poole
Journal:  Front Immunol       Date:  2022-01-20       Impact factor: 7.561

Review 7.  The Molecular Basis of Predicting Atherosclerotic Cardiovascular Disease Risk.

Authors:  Matthew Nayor; Kemar J Brown; Ramachandran S Vasan
Journal:  Circ Res       Date:  2021-01-21       Impact factor: 17.367

8.  Regioisomer-independent quantification of fatty acid oxidation products by HPLC-ESI-MS/MS analysis of sodium adducts.

Authors:  Katelyn W Ahern; Vlad Serbulea; Catherine L Wingrove; Zachary T Palas; Norbert Leitinger; Thurl E Harris
Journal:  Sci Rep       Date:  2019-08-01       Impact factor: 4.379

Review 9.  Recent advances in analytical strategies for mass spectrometry-based lipidomics.

Authors:  Tianrun Xu; Chunxiu Hu; Qiuhui Xuan; Guowang Xu
Journal:  Anal Chim Acta       Date:  2020-09-30       Impact factor: 6.558

10.  Metabolomic profiles associated with a mouse model of antipsychotic-induced food intake and weight gain.

Authors:  Rizaldy C Zapata; Sara Brin Rosenthal; Kathleen Fisch; Khoi Dao; Mohit Jain; Olivia Osborn
Journal:  Sci Rep       Date:  2020-10-29       Impact factor: 4.379

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