Literature DB >> 30314916

Environmental DNA Time Series in Ecology.

Miklós Bálint1, Markus Pfenninger2, Hans-Peter Grossart3, Pierre Taberlet4, Mark Vellend5, Mathew A Leibold6, Göran Englund7, Diana Bowler8.   

Abstract

Ecological communities change in time and space, but long-term dynamics at the century-to-millennia scale are poorly documented due to lack of relevant data sets. Nevertheless, understanding long-term dynamics is important for explaining present-day biodiversity patterns and placing conservation goals in a historical context. Here, we use recent examples and new perspectives to highlight how environmental DNA (eDNA) is starting to provide a powerful new source of temporal data for research questions that have so far been overlooked, by helping to resolve the ecological dynamics of populations, communities, and ecosystems over hundreds to thousands of years. We give examples of hypotheses that may be addressed by temporal eDNA biodiversity data, discuss possible research directions, and outline related challenges. Crown
Copyright © 2018. Published by Elsevier Ltd. All rights reserved.

Keywords:  biodiversity dynamics; eDNA metabarcoding; global change; historic data; human impact; temporal ecology

Mesh:

Substances:

Year:  2018        PMID: 30314916     DOI: 10.1016/j.tree.2018.09.003

Source DB:  PubMed          Journal:  Trends Ecol Evol        ISSN: 0169-5347            Impact factor:   17.712


  21 in total

1.  Long-term abundance trends of insect taxa are only weakly correlated.

Authors:  Roel van Klink; Diana E Bowler; Konstantin B Gongalsky; Jonathan M Chase
Journal:  Biol Lett       Date:  2022-02-23       Impact factor: 3.703

2.  Decomposing predictability to identify dominant causal drivers in complex ecosystems.

Authors:  Kenta Suzuki; Shin-Ichiro S Matsuzaki; Hiroshi Masuya
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-10       Impact factor: 12.779

3.  Animals, protists and bacteria share marine biogeographic patterns.

Authors:  Luke E Holman; Mark de Bruyn; Simon Creer; Gary Carvalho; Julie Robidart; Marc Rius
Journal:  Nat Ecol Evol       Date:  2021-04-15       Impact factor: 15.460

4.  Environmental DNA allows upscaling spatial patterns of biodiversity in freshwater ecosystems.

Authors:  Luca Carraro; Elvira Mächler; Remo Wüthrich; Florian Altermatt
Journal:  Nat Commun       Date:  2020-07-17       Impact factor: 14.919

Review 5.  Beyond Biodiversity: Can Environmental DNA (eDNA) Cut It as a Population Genetics Tool?

Authors:  Clare I M Adams; Michael Knapp; Neil J Gemmell; Gert-Jan Jeunen; Michael Bunce; Miles D Lamare; Helen R Taylor
Journal:  Genes (Basel)       Date:  2019-03-01       Impact factor: 4.096

6.  New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality.

Authors:  C Giguet-Covex; G F Ficetola; K Walsh; J Poulenard; M Bajard; L Fouinat; P Sabatier; L Gielly; E Messager; A L Develle; F David; P Taberlet; E Brisset; F Guiter; R Sinet; F Arnaud
Journal:  Sci Rep       Date:  2019-10-11       Impact factor: 4.379

7.  Evolutionary genomics can improve prediction of species' responses to climate change.

Authors:  Ann-Marie Waldvogel; Barbara Feldmeyer; Gregor Rolshausen; Moises Exposito-Alonso; Christian Rellstab; Robert Kofler; Thomas Mock; Karl Schmid; Imke Schmitt; Thomas Bataillon; Outi Savolainen; Alan Bergland; Thomas Flatt; Frederic Guillaume; Markus Pfenninger
Journal:  Evol Lett       Date:  2020-01-14

8.  Oscillayers: A dataset for the study of climatic oscillations over Plio-Pleistocene time-scales at high spatial-temporal resolution.

Authors:  Alexander Gamisch
Journal:  Glob Ecol Biogeogr       Date:  2019-07-22       Impact factor: 7.144

9.  Droplet digital PCR assays for the quantification of brown trout (Salmo trutta) and Arctic char (Salvelinus alpinus) from environmental DNA collected in the water of mountain lakes.

Authors:  Eric Capo; Göran Spong; Sven Norman; Helena Königsson; Pia Bartels; Pär Byström
Journal:  PLoS One       Date:  2019-12-18       Impact factor: 3.240

Review 10.  Dead or alive: sediment DNA archives as tools for tracking aquatic evolution and adaptation.

Authors:  Marianne Ellegaard; Martha R J Clokie; Till Czypionka; Dagmar Frisch; Anna Godhe; Anke Kremp; Andrey Letarov; Terry J McGenity; Sofia Ribeiro; N John Anderson
Journal:  Commun Biol       Date:  2020-04-07
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