| Literature DB >> 30312339 |
Miguel Ángel Matus-Hernández1, Norma Yolanda Hernández-Saavedra1, Raúl Octavio Martínez-Rincón2.
Abstract
Chlorophyll-a (Chl-a) concentration is a key parameter to describe water quality in marine and freshwater environments. Nowadays, several products with Chl-a have derived from satellite imagery, but they are not available or reliable sometimes for coastal and/or small water bodies. Thus, in the last decade several methods have been described to estimate Chl-a with high-resolution (30 m) satellite imagery, such as Landsat, but a standardized method to estimate Chl-a from Landsat imagery has not been accepted yet. Therefore, this study evaluated the predictive performance of regression models (Simple Linear Regression [SLR], Multiple Linear Regression [MLR] and Generalized Additive Models [GAMs]) to estimate Chl-a based on Landsat imagery, using in situ Chl-a data collected (synchronized with the overpass of Landsat 8 satellite) and spectral reflectance in the visible light portion (bands 1-4) and near infrared (band 5). These bands were selected because of Chl-a absorbance/reflectance properties in these wavelengths. According to goodness of fit, GAM outperformed SLR and MLR. However, the model validation showed that MLR performed better in predicting log-transformed Chl-a. Thus, MLR, constructed by using four spectral bands (1, 2, 3, and 5), was considered the best method to predict Chl-a. The coefficients of this model suggested that log-transformed Chl-a concentration had a positive linear relationship with bands 1 (coastal/aerosol), 3 (green), and 5 (NIR). On the other hand, band 2 (blue) suggested a negative relationship, which implied high coherence with Chl-a absorbance/reflectance properties measured in the laboratory, indicating that Landsat 8 images could be applied effectively to estimate Chl-a concentrations in coastal environments.Entities:
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Year: 2018 PMID: 30312339 PMCID: PMC6185857 DOI: 10.1371/journal.pone.0205682
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Map of the geographical location of the study area.
Distribution of the sampling sites (green triangles) and arbitrary areas (polygons) used for time series analysis. Map generated in programming language R using Landsat 8 image from 2016-09-09.
Descriptive statistics of in situ-measured Chlorophyll-a concentrations (μg*l-1).
| Date | A1 | A2 | A3 | ||||||
| Min | Mean | Max | Min | Mean | Max | Min | Mean | Max | |
| 2016-08-24 | 0.33 | 0.44 | 0.55 | 0.18 | 0.19 | 0.20 | |||
| 2016-09-09 | 1.37 | 1.37 | 1.37 | 0.43 | 0.72 | 1.34 | 0.37 | 0.51 | 0.61 |
| 2016-09-25 | 0.95 | 1.14 | 1.41 | 0.61 | 0.79 | 1.05 | |||
| 2016-10-27 | 0.41 | 0.58 | 0.79 | 0.30 | 0.33 | 0.38 | |||
| 2016-11-28 | 0.58 | 0.58 | 0.58 | 0.51 | 0.54 | 0.56 | |||
| 2017-01-31 | 0.42 | 0.47 | 0.52 | 0.39 | 0.39 | 0.39 | 0.52 | 0.52 | 0.52 |
| 2017-02-16 | 0.37 | 0.37 | 0.37 | 0.38 | 0.38 | 0.38 | 0.36 | 0.36 | 0.36 |
| 2017-03-20 | 0.51 | 0.85 | 1.04 | 0.59 | 0.75 | 0.99 | 0.33 | 0.33 | 0.34 |
| 2017-04-05 | 0.33 | 0.33 | 0.33 | 0.39 | 0.44 | 0.47 | 0.19 | 0.19 | 0.19 |
| 2017-04-21 | 0.50 | 0.59 | 0.68 | 0.52 | 0.52 | 0.53 | |||
| 2017-05-23 | 0.35 | 0.47 | 0.59 | 0.26 | 0.31 | 0.37 | 0.33 | 0.33 | 0.33 |
| 2017-06-08 | 2.12 | 2.12 | 2.12 | 2.11 | 2.23 | 2.37 | 1.42 | 2.10 | 2.71 |
| Date | A4 | A5 | A6 | ||||||
| Min | Mean | Max | Min | Mean | Max | Min | Mean | Max | |
| 2016-08-24 | 0.16 | 0.28 | 0.66 | 0.25 | 0.25 | 0.25 | |||
| 2016-09-09 | 0.61 | 0.61 | 0.61 | ||||||
| 2016-09-25 | 0.17 | 0.24 | 0.41 | ||||||
| 2016-10-27 | 0.18 | 0.18 | 0.18 | 0.20 | 0.23 | 0.27 | |||
| 2016-11-28 | 0.40 | 0.41 | 0.41 | 0.38 | 0.42 | 0.45 | 0.34 | 0.36 | 0.37 |
| 2017-01-31 | 0.42 | 0.42 | 0.42 | 0.33 | 0.36 | 0.41 | 0.43 | 0.43 | 0.43 |
| 2017-02-16 | 0.49 | 0.60 | 0.71 | 0.64 | 0.66 | 0.68 | 0.25 | 0.25 | 0.25 |
| 2017-03-20 | 0.49 | 0.51 | 0.53 | 0.43 | 0.50 | 0.58 | |||
| 2017-04-05 | 0.24 | 0.28 | 0.33 | 0.36 | 0.36 | 0.36 | 0.22 | 0.22 | 0.22 |
| 2017-04-21 | 0.16 | 0.16 | 0.17 | 0.15 | 0.17 | 0.20 | 0.18 | 0.25 | 0.40 |
| 2017-05-23 | 0.14 | 0.17 | 0.24 | 0.14 | 0.17 | 0.23 | 0.22 | 0.22 | 0.22 |
| 2017-06-08 | 0.46 | 0.94 | 1.52 | ||||||
Min, Minimum; Max, maximum; SD. A1 to A6 arbitrary areas (see Fig 1 for details).
Fig 2Observed chlorophyll-a values during the survey period.
Solid lines represent medians; boxes the interquartile ranges; whiskers minimum and maximum or 1.5 times the interquartile range (when outliers were present); points represent the outliers. A1-A6 arbitrary areas (see Fig 1 for details).
Goodness of fit of the three best fitted SLR, MLR, and GAM, respectively, for log-transformed Chl-a estimation.
| Model | R2 | adj.R2 |
|---|---|---|
| y = 1.84–6.54*(B12/B4) | 0.506 | 0.502 |
| y = -3.06 + 5.55*(B4/B2) | 0.477 | 0.473 |
| y = 0.94 + 88.45*B1–194.77*B2 + 97.55*B3 + 10.79*B4 | 0.735 | 0.725 |
| y = 1.54 + 79.56*B1–191.62*B2 + 102.22*B3 + 13.17*B5 | 0.757 | 0.748 |
| y = f(B1) + f(B2) + f(B3) + f(B5) | 0.848 | |
| y = f(B1) + f(B2) + f(B3) + f(B4) + f(B5) | 0.847 |
R2, Coefficient of determination; adj. R2, adjusted coefficient of determination. In bold the best fitted SLR, MLR, and GAM, respectively.
Predictive performance of the three best fitted SLR, MLR, and GAM, respectively, applied for log-transformed Chl-a estimation.
| Model | R | MSRE |
|---|---|---|
| y = 1.84–6.54*(B12/B4) | 0.791 | 0.288 |
| y = -3.06 + 5.55*(B4/B2) | 0.849 | 0.303 |
| y = 1.48 + 81.53*B1–187.8*B2 + 98.22*B3 | 0.856 | 0.209 |
| y = 1.39 + 95.99*B1–211.35*B2 + 117.22*B3–22.85*B4 + 13.2*B5 | 0.866 | 0.194 |
| y = f(B2) + f(B3) + f(B4) | 0.821 | 0.286 |
| y = f(B1) + f(B2) + f(B3) + f(B4) | 0.798 | 0.274 |
R, Pearson coefficient of correlation; RMSE, root-mean-square error. In bold SLR, MLR, and GAM, respectively, with the highest predictive performance.
Fig 3Residual analysis of the best fitted SLR (top), MLR (center), and GAM (bottom), respectively.
Descriptive statistics of coefficients of the best-fitted model.
| Coefficient | Standard error | T value | P | |
|---|---|---|---|---|
| Intercept | 1.54 | 0.77 | 2.13 | 0.036 |
| B1 (c/a) | 79.56 | 14.96 | 5.32 | <0.001 |
| B2 (blue) | -191.62 | 15.55 | -11.58 | <0.001 |
| B3 (green) | 102.22 | 6.65 | 15.36 | <0.001 |
| B5 (NIR) | 13.17 | 3.70 | 3.56 | <0.001 |
Fig 4Predictions of Chl-a (μg*l-1) obtained from the best-fitted model and the Landsat imagery set for the period 2013–2017.
Points represent the means; whiskers represent the interquartile ranges. A1-A6 arbitrary areas (see Fig 1 for details).
Fig 5Predicted Chlorophyll-a (μg*l-1) in the study area, corresponding to June 2013 to 2017.
Maps generated in programming language R.