Literature DB >> 30307510

TBX6 compound inheritance leads to congenital vertebral malformations in humans and mice.

Nan Yang1,2,3, Nan Wu4,5,6,7, Ling Zhang1, Yanxue Zhao4,5, Jiaqi Liu4,5, Xiangyu Liang8, Xiaojun Ren1, Weiyu Li1, Weisheng Chen4,5, Shuangshuang Dong1, Sen Zhao4,5, Jiachen Lin4,5, Hang Xiang1, Huadan Xue9, Lu Chen1, Hao Sun9, Jianguo Zhang4,5,6, Jiangang Shi10, Shuyang Zhang5,11, Daru Lu1, Xiaohui Wu12, Li Jin1, Jiandong Ding8, Guixing Qiu4,5,6, Zhihong Wu4,5,13, James R Lupski7,14,15, Feng Zhang1,2,3.   

Abstract

Congenital vertebral malformations (CVMs) are associated with human TBX6 compound inheritance that combines a rare null allele and a common hypomorphic allele at the TBX6 locus. Our previous in vitro evidence suggested that this compound inheritance resulted in a TBX6 gene dosage of less than haploinsufficiency (i.e. <50%) as a potential mechanism of TBX6-associated CVMs. To further investigate this pathogenetic model, we ascertained and collected 108 Chinese CVM cases and found that 10 (9.3%) of them carried TBX6 null mutations in combination with common hypomorphic variants at the second TBX6 allele. For in vivo functional verification and genetic analysis of TBX6 compound inheritance, we generated both null and hypomorphic mutations in mouse Tbx6 using the CRISPR-Cas9 method. These Tbx6 mutants are not identical to the patient variants at the DNA sequence level, but instead functionally mimic disease-associated TBX6 variants. Intriguingly, as anticipated by the compound inheritance model, a high penetrance of CVM phenotype was only observed in the mice with combined null and hypomorphic alleles of Tbx6. These findings are consistent with our experimental observations in humans and supported the dosage effect of TBX6 in CVM etiology. In conclusion, our findings in the newly collected human CVM subjects and Tbx6 mouse models consistently support the contention that TBX6 compound inheritance causes CVMs, potentially via a gene dosage-dependent mechanism. Furthermore, mouse Tbx6 mutants mimicking human CVM-associated variants will be useful models for further mechanistic investigations of CVM pathogenesis in the cases associated with TBX6.

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Year:  2019        PMID: 30307510      PMCID: PMC6489408          DOI: 10.1093/hmg/ddy358

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  25 in total

1.  2018 Victor A. McKusick Leadership Award: Molecular Mechanisms for Genomic and Chromosomal Rearrangements.

Authors:  James R Lupski
Journal:  Am J Hum Genet       Date:  2019-03-07       Impact factor: 11.025

2.  Perturbations of genes essential for Müllerian duct and Wölffian duct development in Mayer-Rokitansky-Küster-Hauser syndrome.

Authors:  Na Chen; Sen Zhao; Angad Jolly; Lianlei Wang; Hongxin Pan; Jian Yuan; Shaoke Chen; André Koch; Congcong Ma; Weijie Tian; Ziqi Jia; Jia Kang; Lina Zhao; Chenglu Qin; Xin Fan; Katharina Rall; Zeynep Coban-Akdemir; Zefu Chen; Shalini Jhangiani; Ze Liang; Yuchen Niu; Xiaoxin Li; Zihui Yan; Yong Wu; Shuangshuang Dong; Chengcheng Song; Guixing Qiu; Shuyang Zhang; Pengfei Liu; Jennifer E Posey; Feng Zhang; Guangnan Luo; Zhihong Wu; Jianzhong Su; Jianguo Zhang; Eugenia Y Chen; Konstantinos Rouskas; Stavros Glentis; Flora Bacopoulou; Efthymios Deligeoroglou; George Chrousos; Stanislas Lyonnet; Michel Polak; Carla Rosenberg; Irene Dingeldein; Ximena Bonilla; Christelle Borel; Richard A Gibbs; Jennifer E Dietrich; Antigone S Dimas; Stylianos E Antonarakis; Sara Y Brucker; James R Lupski; Nan Wu; Lan Zhu
Journal:  Am J Hum Genet       Date:  2021-02-04       Impact factor: 11.025

3.  Human and mouse studies establish TBX6 in Mendelian CAKUT and as a potential driver of kidney defects associated with the 16p11.2 microdeletion syndrome.

Authors:  Nan Yang; Nan Wu; Shuangshuang Dong; Ling Zhang; Yanxue Zhao; Weisheng Chen; Renqian Du; Chengcheng Song; Xiaojun Ren; Jiaqi Liu; Davut Pehlivan; Zhenlei Liu; Jia Rao; Chunyan Wang; Sen Zhao; Amy M Breman; Huadan Xue; Hao Sun; Jianxiong Shen; Shuyang Zhang; Jennifer E Posey; Hong Xu; Li Jin; Jianguo Zhang; Pengfei Liu; Simone Sanna-Cherchi; Guixing Qiu; Zhihong Wu; James R Lupski; Feng Zhang
Journal:  Kidney Int       Date:  2020-05-22       Impact factor: 10.612

4.  Complex Compound Inheritance of Lethal Lung Developmental Disorders Due to Disruption of the TBX-FGF Pathway.

Authors:  Justyna A Karolak; Marie Vincent; Gail Deutsch; Tomasz Gambin; Benjamin Cogné; Olivier Pichon; Francesco Vetrini; Heather C Mefford; Jennifer N Dines; Katie Golden-Grant; Katrina Dipple; Amanda S Freed; Kathleen A Leppig; Megan Dishop; David Mowat; Bruce Bennetts; Andrew J Gifford; Martin A Weber; Anna F Lee; Cornelius F Boerkoel; Tina M Bartell; Catherine Ward-Melver; Thomas Besnard; Florence Petit; Iben Bache; Zeynep Tümer; Marie Denis-Musquer; Madeleine Joubert; Jelena Martinovic; Claire Bénéteau; Arnaud Molin; Dominique Carles; Gwenaelle André; Eric Bieth; Nicolas Chassaing; Louise Devisme; Lara Chalabreysse; Laurent Pasquier; Véronique Secq; Massimiliano Don; Maria Orsaria; Chantal Missirian; Jérémie Mortreux; Damien Sanlaville; Linda Pons; Sébastien Küry; Stéphane Bézieau; Jean-Michel Liet; Nicolas Joram; Tiphaine Bihouée; Daryl A Scott; Chester W Brown; Fernando Scaglia; Anne Chun-Hui Tsai; Dorothy K Grange; John A Phillips; Jean P Pfotenhauer; Shalini N Jhangiani; Claudia G Gonzaga-Jauregui; Wendy K Chung; Galen M Schauer; Mark H Lipson; Catherine L Mercer; Arie van Haeringen; Qian Liu; Edwina Popek; Zeynep H Coban Akdemir; James R Lupski; Przemyslaw Szafranski; Bertrand Isidor; Cedric Le Caignec; Paweł Stankiewicz
Journal:  Am J Hum Genet       Date:  2019-01-10       Impact factor: 11.025

5.  Clan genomics: From OMIM phenotypic traits to genes and biology.

Authors:  James R Lupski
Journal:  Am J Med Genet A       Date:  2021-08-18       Impact factor: 2.802

6.  A Genocentric Approach to Discovery of Mendelian Disorders.

Authors:  Adam W Hansen; Mullai Murugan; He Li; Michael M Khayat; Liwen Wang; Jill Rosenfeld; B Kim Andrews; Shalini N Jhangiani; Zeynep H Coban Akdemir; Fritz J Sedlazeck; Allison E Ashley-Koch; Pengfei Liu; Donna M Muzny; Erica E Davis; Nicholas Katsanis; Aniko Sabo; Jennifer E Posey; Yaping Yang; Michael F Wangler; Christine M Eng; V Reid Sutton; James R Lupski; Eric Boerwinkle; Richard A Gibbs
Journal:  Am J Hum Genet       Date:  2019-10-24       Impact factor: 11.025

7.  TBX6 missense variants expand the mutational spectrum in a non-Mendelian inheritance disease.

Authors:  Weisheng Chen; Jiachen Lin; Lianlei Wang; Xiaoxin Li; Sen Zhao; Jiaqi Liu; Zeynep C Akdemir; Yanxue Zhao; Renqian Du; Yongyu Ye; Xiaofei Song; Yuanqiang Zhang; Zihui Yan; Xinzhuang Yang; Mao Lin; Jianxiong Shen; Shengru Wang; Na Gao; Ying Yang; Ying Liu; Wenli Li; Jia Liu; Na Zhang; Xu Yang; Yuan Xu; Jianguo Zhang; Mauricio R Delgado; Jennifer E Posey; Guixing Qiu; Jonathan J Rios; Pengfei Liu; Carol A Wise; Feng Zhang; Zhihong Wu; James R Lupski; Nan Wu
Journal:  Hum Mutat       Date:  2019-09-26       Impact factor: 4.878

8.  TBX6-associated congenital scoliosis (TACS) as a clinically distinguishable subtype of congenital scoliosis: further evidence supporting the compound inheritance and TBX6 gene dosage model.

Authors:  Jiaqi Liu; Nan Wu; Nan Yang; Kazuki Takeda; Weisheng Chen; Weiyu Li; Renqian Du; Sen Liu; Yangzhong Zhou; Ling Zhang; Zhenlei Liu; Yuzhi Zuo; Sen Zhao; Robert Blank; Davut Pehlivan; Shuangshuang Dong; Jianguo Zhang; Jianxiong Shen; Nuo Si; Yipeng Wang; Gang Liu; Shugang Li; Yanxue Zhao; Hong Zhao; Yixin Chen; Yu Zhao; Xiaofei Song; Jianhua Hu; Mao Lin; Ye Tian; Bo Yuan; Keyi Yu; Yuchen Niu; Bin Yu; Xiaoxin Li; Jia Chen; Zihui Yan; Qiankun Zhu; Xiaolu Meng; Xiaoli Chen; Jianzhong Su; Xiuli Zhao; Xiaoyue Wang; Yue Ming; Xiao Li; Cathleen L Raggio; Baozhong Zhang; Xisheng Weng; Shuyang Zhang; Xue Zhang; Kota Watanabe; Morio Matsumoto; Li Jin; Yiping Shen; Nara L Sobreira; Jennifer E Posey; Philip F Giampietro; David Valle; Pengfei Liu; Zhihong Wu; Shiro Ikegawa; James R Lupski; Feng Zhang; Guixing Qiu
Journal:  Genet Med       Date:  2019-01-14       Impact factor: 8.822

Review 9.  Insights into genetics, human biology and disease gleaned from family based genomic studies.

Authors:  Jennifer E Posey; Anne H O'Donnell-Luria; Jessica X Chong; Tamar Harel; Shalini N Jhangiani; Zeynep H Coban Akdemir; Steven Buyske; Davut Pehlivan; Claudia M B Carvalho; Samantha Baxter; Nara Sobreira; Pengfei Liu; Nan Wu; Jill A Rosenfeld; Sushant Kumar; Dimitri Avramopoulos; Janson J White; Kimberly F Doheny; P Dane Witmer; Corinne Boehm; V Reid Sutton; Donna M Muzny; Eric Boerwinkle; Murat Günel; Deborah A Nickerson; Shrikant Mane; Daniel G MacArthur; Richard A Gibbs; Ada Hamosh; Richard P Lifton; Tara C Matise; Heidi L Rehm; Mark Gerstein; Michael J Bamshad; David Valle; James R Lupski
Journal:  Genet Med       Date:  2019-01-18       Impact factor: 8.822

10.  Diagnostic yield and clinical impact of exome sequencing in early-onset scoliosis (EOS).

Authors:  Sen Zhao; Yuanqiang Zhang; Weisheng Chen; Weiyu Li; Shengru Wang; Lianlei Wang; Yanxue Zhao; Mao Lin; Yongyu Ye; Jiachen Lin; Yu Zheng; Jiaqi Liu; Hengqiang Zhao; Zihui Yan; Yongxin Yang; Yingzhao Huang; Guanfeng Lin; Zefu Chen; Zhen Zhang; Sen Liu; Lichao Jin; Zhaoyang Wang; Jingdan Chen; Yuchen Niu; Xiaoxin Li; Yong Wu; Yipeng Wang; Renqian Du; Na Gao; Hong Zhao; Ying Yang; Ying Liu; Ye Tian; Wenli Li; Yu Zhao; Jia Liu; Bin Yu; Na Zhang; Keyi Yu; Xu Yang; Shugang Li; Yuan Xu; Jianhua Hu; Zhe Liu; Jianxiong Shen; Shuyang Zhang; Jianzhong Su; Anas M Khanshour; Yared H Kidane; Brandon Ramo; Jonathan J Rios; Pengfei Liu; V Reid Sutton; Jennifer E Posey; Zhihong Wu; Guixing Qiu; Carol A Wise; Feng Zhang; James R Lupski; Jianguo Zhang; Nan Wu
Journal:  J Med Genet       Date:  2020-05-07       Impact factor: 6.318

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