Literature DB >> 30307179

Predicting structural properties of fluids by thermodynamic extrapolation.

Nathan A Mahynski1, Sally Jiao2, Harold W Hatch1, Marco A Blanco1, Vincent K Shen1.   

Abstract

We describe a methodology for extrapolating the structural properties of multicomponent fluids from one thermodynamic state to another. These properties generally include features of a system that may be computed from an individual configuration such as radial distribution functions, cluster size distributions, or a polymer's radius of gyration. This approach is based on the principle of using fluctuations in a system's extensive thermodynamic variables, such as energy, to construct an appropriate Taylor series expansion for these structural properties in terms of intensive conjugate variables, such as temperature. Thus, one may extrapolate these properties from one state to another when the series is truncated to some finite order. We demonstrate this extrapolation for simple and coarse-grained fluids in both the canonical and grand canonical ensembles, in terms of both temperatures and the chemical potentials of different components. The results show that this method is able to reasonably approximate structural properties of such fluids over a broad range of conditions. Consequently, this methodology may be employed to increase the computational efficiency of molecular simulations used to measure the structural properties of certain fluid systems, especially those used in high-throughput or data-driven investigations.

Entities:  

Year:  2018        PMID: 30307179      PMCID: PMC6183068          DOI: 10.1063/1.5026493

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  37 in total

1.  Integral-equation theory of the structure of polymer melts.

Authors: 
Journal:  Phys Rev Lett       Date:  1987-01-19       Impact factor: 9.161

2.  New Monte Carlo technique for studying phase transitions.

Authors: 
Journal:  Phys Rev Lett       Date:  1988-12-05       Impact factor: 9.161

3.  Determination of fluid-phase behavior using transition-matrix Monte Carlo: binary Lennard-Jones mixtures.

Authors:  Vincent K Shen; Jeffrey R Errington
Journal:  J Chem Phys       Date:  2005-02-08       Impact factor: 3.488

4.  Phase-space overlap measures. I. Fail-safe bias detection in free energies calculated by molecular simulation.

Authors:  Di Wu; David A Kofke
Journal:  J Chem Phys       Date:  2005-08-01       Impact factor: 3.488

5.  Statistically optimal analysis of samples from multiple equilibrium states.

Authors:  Michael R Shirts; John D Chodera
Journal:  J Chem Phys       Date:  2008-09-28       Impact factor: 3.488

6.  Predicting Protein Interactions of Concentrated Globular Protein Solutions Using Colloidal Models.

Authors:  Mahlet A Woldeyes; Cesar Calero-Rubio; Eric M Furst; Christopher J Roberts
Journal:  J Phys Chem B       Date:  2017-04-27       Impact factor: 2.991

7.  Explicit- and implicit-solvent simulations of micellization in surfactant solutions.

Authors:  Arben Jusufi; Athanassios Z Panagiotopoulos
Journal:  Langmuir       Date:  2014-10-05       Impact factor: 3.882

8.  Mapping coexistence lines via free-energy extrapolation: application to order-disorder phase transitions of hard-core mixtures.

Authors:  Fernando A Escobedo
Journal:  J Chem Phys       Date:  2014-03-07       Impact factor: 3.488

Review 9.  Pharmaceutical Perspective on Opalescence and Liquid-Liquid Phase Separation in Protein Solutions.

Authors:  Ashlesha S Raut; Devendra S Kalonia
Journal:  Mol Pharm       Date:  2016-04-05       Impact factor: 4.939

10.  Effect of the surface charge distribution on the fluid phase behavior of charged colloids and proteins.

Authors:  Marco A Blanco; Vincent K Shen
Journal:  J Chem Phys       Date:  2016-10-21       Impact factor: 3.488

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  1 in total

1.  Extrapolation and interpolation strategies for efficiently estimating structural observables as a function of temperature and density.

Authors:  Jacob I Monroe; Harold W Hatch; Nathan A Mahynski; M Scott Shell; Vincent K Shen
Journal:  J Chem Phys       Date:  2020-10-14       Impact factor: 3.488

  1 in total

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