| Literature DB >> 30302956 |
Joo Hee Lee1, Kyung Wook Jo1, Tae Sun Shim2.
Abstract
BACKGROUND: The purpose of this study was to analyze the relationship between the gene mutation patterns by the GenoType MTBDRplus (MTBDRplus) assay and the phenotypic drug susceptibility test (pDST) results of isoniazid (INH) and prothionamide (Pto).Entities:
Keywords: Biological Assay; Disease Susceptibility; Genotype; InhA Protein; Isoniazid; Mycobacterium; Mycobacterium tuberculosis; Prothionamide; Research Design; katG Protein
Year: 2018 PMID: 30302956 PMCID: PMC6435929 DOI: 10.4046/trd.2018.0027
Source DB: PubMed Journal: Tuberc Respir Dis (Seoul) ISSN: 1738-3536
The baseline characteristics of 206 patients with a genotypic resistance to isoniazid, stratified by the genotypic rifampin resistance
| Variable | INH mono-resistance | MDR-TB | Total | p-value |
|---|---|---|---|---|
| No. of subjects | 93 (45.1) | 113 (54.9) | 206 (100) | |
| Age, yr | 50.9±16.9 | 43.0±16.1 | 46.6±17.0 | 0.001 |
| Male sex | 62 (66.7) | 70 (61.9) | 132 (64.1) | 0.482 |
| BMI, kg/m2 | 21.3±3.4 | 21.1±3.0 | 21.2±3.2 | 0.745 |
| Previous TB history | 19 (20.4) | 60 (53.1) | 79 (38.3) | <0.001 |
| Concomitant disease | ||||
| Diabetes mellitus | 12 (12.9) | 19 (16.8) | 31 (15.0) | 0.435 |
| Chronic liver disease* | 10 (10.8) | 3 (2.7) | 13 (6.3) | 0.017 |
| Chronic kidney disease | 4 (4.3) | 1 (0.9) | 5 (2.4) | 0.177 |
| Respiratory disease† | 7 (7.5) | 5 (4.4) | 12 (5.8) | 0.344 |
| Transplantation | 5 (5.4) | 2 (1.8) | 7 (3.4) | 0.248 |
| Others‡ | 7 (7.5) | 5 (4.4) | 12 (5.8) | 0.344 |
| Positive HIV test | 1 (1.1) | 0 (0) | 1 (0.5) | 0.451 |
| Phenotypic DST results | ||||
| INH-mono resistance | 75 (80.6) | 6 (5.3) | 81 (39.3) | |
| High-level resistance | 54 (58.1) | 4 (3.5) | 58 (28.2) | |
| Low-level resistance | 21 (22.6) | 2 (1.8) | 23 (11.2) | |
| MDR-TB | 2 (2.2) | 105 (92.9) | 107 (51.9) | |
| RIF-mono resistance | 0 (0) | 2 (1.8) | 2 (1.0) | |
| Susceptible to INH/RIF | 16 (17.2) | 0 (0) | 16 (7.8) |
Values are presented as number (%).
*Chronic liver disease included alcoholic LC and chronic hepatitis B and C. †Respiratory disease included lung/tracheal cancer (n=4), COPD (n=2), and pneumoconiosis (n=1) in INH-mono resistance, and lung cancer (n=3), COPD (n=1), and IPF (n=1) in MDR-TB. ‡Other comorbidities in INH-mono resistant TB patients included Crohn's disease (n=2; one with anti-TNF-α therapy and one without), hematologic malignancy without bone marrow transplantation (n=2; one with myelodysplastic syndrome and one with lymphoma), adrenal insufficiency (n=1), c-ANCA associated vasculitis (n=1), and IgA nephropathy with normal kidney function (n=1). MDR-TB patients had rheumatoid arthritis on anti-TNFα therapy (n=1), hematologic malignancy without bone marrow transplantation (n=2; one with acute myeloid leukemia and one with lymphoma), and adrenal insufficiency (n=2).
INH: isoniazid; MDR-TB: multidrug resistant tuberculosis; BMI: body mass index; TB: tuberculosis; HIV: human immunodeficiency virus; DST: drug sensitivity test; RIF: rifampin; LC: liver cirrhosis; COPD: chronic obstructive pulmonary disease; IPF: idiopathic pulmonary fibrosis; TNF-α: tumor necrosis factor α.
The mutation patterns of the katG and inhA genes in 206 patients with a genotypic INH resistance
| Group | INH mono-resistance | MDR-TB | Total | p-value |
|---|---|---|---|---|
| No. of subjects | 93 (45.1) | 113 (54.9) | 206 (100) | |
| 55 (59.1) | 79 (69.9) | 134 (65.0) | 0.107 | |
| Mutant probe (+) | 50 (53.8) | 77 (68.1) | 127 (61.7) | 0.035 |
| Wild-type band loss alone | 5 (5.4) | 2 (1.8) | 7 (3.4) | 0.248 |
| 37 (39.8) | 29 (25.7) | 66 (32.0) | 0.031 | |
| Mutant probe (+) | 33 (35.5) | 29 (25.7) | 62 (30.1) | 0.126 |
| Wild-type band loss alone | 4 (4.3) | 0 (0) | 4 (1.9) | 0.040 |
| Both gene mutation | 1 (1.1) | 5 (4.4) | 6 (2.9) | 0.225 |
| | 0 (0) | 2 (1.8) | 2 (1.0) | |
| | 1 (1.1) | 0 (0) | 1 (0.5) | |
| | 0 (0) | 1 (0.9) | 1 (0.5) | |
| | 0 (0) | 1 (0.9) | 1 (0.5) | |
| | 0 (0) | 1 (0.9) | 1 (0.5) |
Values are presented as number (%).
INH: isoniazid; MDR-TB: multidrug-resistant tuberculosis; katG WT: S315 region; katG MUT1: S315T[AGC315ACC]; inhA WT1: positions −15 to −16; inhA WT2: positions −8; inhA MUT1: C15T.
The phenotypic susceptibility to INH and Pto based on the specific mutation patterns of katG and inhA
| Mutation | Total | Phenotypic INH resistance | Phenotypic Pto resistance | ||
|---|---|---|---|---|---|
| High-level | Low-level | Total | |||
| No. of subjects | 206 (100) | 149 (72.3) | 39 (18.9) | 188 (91.3) | 34 (16.5) |
| 134 (65.0) | 127 (94.8) | 3 (2.2) | 130 (97.0) | 11 (8.2) | |
| MUT1 (+) | 119 (57.8) | 112 (94.1) | 3 (2.5) | 115 (96.6) | 9 (7.6) |
| MUT2 (+) | 8 (3.9) | 8 (100) | 0 (0) | 8 (100) | 2 (25) |
| WT (–)/MUT1 (–)/MUT2 (–) | 7 (3.4) | 7 (100) | 0 (0) | 7 (100) | 0 (0) |
| 66 (32.0) | 18 (27.3) | 34 (51.5) | 52 (78.8) | 21 (31.8) | |
| MUT1 (+) | 60 (29.1) | 17 (28.3) | 34 (56.7) | 51 (85) | 21 (35) |
| MUT2 (+) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) |
| MUT3A (+) | 1 (0.5) | 0 (0) | 0 (0) | 0 (0) | 0 (0) |
| MUT3B (+) | 1 (0.5) | 0 (0) | 0 (0) | 0 (0) | 0 (0) |
| WT1 (–) and all MUT (–) | 4 (1.9) | 1 (25) | 0 (0) | 1 (25) | 0 (0) |
| WT2 (–) and all MUT (–) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) |
| Both gene mutation | 6 (2.9) | 4 (66.7) | 2 (33.3) | 6 (100) | 2 (33.3) |
| | 2 (1.0) | 2 (100) | 0 (0) | 2 (100) | 0 (0) |
| | 1 (0.5) | 0 (0) | 1 (100) | 1 (100) | 0 (0) |
| | 1 (0.5) | 0 (0) | 1 (100) | 1 (100) | 0 (0) |
| | 1 (0.5) | 1 (100) | 0 (0) | 1 (100) | 1 (100) |
| | 1 (0.5) | 1 (100) | 0 (0) | 1 (100) | 1 (100) |
Values are presented as number (%).
INH: isoniazid; Pto: prothionamide; katG WT: S315 region; katG MUT1, S315T[AGC315ACC]; katG MUT2, S315T[AGC315ACA]); inhA WT1: positions −15 to −16; inhA WT2: positions −8; inhA MUT1: C15T; inhA MUT2, A16G; inhA MUT3A: T8C; inhA MUT3B: T8A.