Literature DB >> 30300974

Gene Discovery in Gelsemium Highlights Conserved Gene Clusters in Monoterpene Indole Alkaloid Biosynthesis.

Jakob Franke1, Jeongwoon Kim2, John P Hamilton2, Dongyan Zhao2, Gina M Pham2, Krystle Wiegert-Rininger2, Emily Crisovan2, Linsey Newton2, Brieanne Vaillancourt2, Evangelos Tatsis1, C Robin Buell2, Sarah E O'Connor1.   

Abstract

Genome mining is a routine technique in microbes for discovering biosynthetic pathways. In plants, however, genomic information is not commonly used to identify novel biosynthesis genes. Here, we present the genome of the medicinal plant and oxindole monoterpene indole alkaloid (MIA) producer Gelsemium sempervirens (Gelsemiaceae). A gene cluster from Catharanthus roseus, which is utilized at least six enzymatic steps downstream from the last common intermediate shared between the two plant alkaloid types, is found in G. sempervirens, although the corresponding enzymes act on entirely different substrates. This study provides insights into the common genomic context of MIA pathways and is an important milestone in the further elucidation of the Gelsemium oxindole alkaloid pathway.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Gelsemium sempervirens; biosynthesis; monoterpene indole alkaloid; strictosidine; synteny

Mesh:

Substances:

Year:  2018        PMID: 30300974     DOI: 10.1002/cbic.201800592

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  18 in total

1.  Ancestral Sequence Reconstruction for Exploring Alkaloid Evolution.

Authors:  Benjamin R Lichman
Journal:  Methods Mol Biol       Date:  2022

2.  Discovery and Characterization of Oxidative Enzymes Involved in Monoterpenoid Indole Alkaloid Biosynthesis.

Authors:  Tuan-Anh Minh Nguyen; Matthew McConnachie; Trinh-Don Nguyen; Thu-Thuy T Dang
Journal:  Methods Mol Biol       Date:  2022

3.  RNA-seq Analysis of Monoterpene Indole Alkaloid Biosynthetic Pathway Elucidation in Catharanthus roseus.

Authors:  Emily Amor Stander; Thomas Dugé de Bernonville; Vincent Courdavault
Journal:  Methods Mol Biol       Date:  2022

4.  Identification of a second 16-hydroxytabersonine-O-methyltransferase suggests an evolutionary relationship between alkaloid and flavonoid metabolisms in Catharanthus roseus.

Authors:  Pamela Lemos Cruz; Ines Carqueijeiro; Konstantinos Koudounas; Dikki Pedenla Bomzan; Emily Amor Stander; Cécile Abdallah; Natalja Kulagina; Audrey Oudin; Arnaud Lanoue; Nathalie Giglioli-Guivarc'h; Dinesh A Nagegowda; Nicolas Papon; Sébastien Besseau; Marc Clastre; Vincent Courdavault
Journal:  Protoplasma       Date:  2022-08-10       Impact factor: 3.186

5.  Developmental Methylome of the Medicinal Plant Catharanthus roseus Unravels the Tissue-Specific Control of the Monoterpene Indole Alkaloid Pathway by DNA Methylation.

Authors:  Thomas Dugé de Bernonville; Stéphane Maury; Alain Delaunay; Christian Daviaud; Cristian Chaparro; Jörg Tost; Sarah Ellen O'Connor; Vincent Courdavault
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6.  Identifying Genes Involved in alkaloid Biosynthesis in Vinca minor Through Transcriptomics and Gene Co-Expression Analysis.

Authors:  Emily Amor Stander; Liuda Johana Sepúlveda; Thomas Dugé de Bernonville; Inês Carqueijeiro; Konstantinos Koudounas; Pamela Lemos Cruz; Sébastien Besseau; Arnaud Lanoue; Nicolas Papon; Nathalie Giglioli-Guivarc'h; Ron Dirks; Sarah Ellen O'Connor; Lucia Atehortùa; Audrey Oudin; Vincent Courdavault
Journal:  Biomolecules       Date:  2020-11-24

7.  A high-quality genome assembly of Morinda officinalis, a famous native southern herb in the Lingnan region of southern China.

Authors:  Jihua Wang; Shiqiang Xu; Yu Mei; Shike Cai; Yan Gu; Minyang Sun; Zhan Liang; Yong Xiao; Muqing Zhang; Shaohai Yang
Journal:  Hortic Res       Date:  2021-06-01       Impact factor: 6.793

8.  Computational biotechnology guides elucidation of the biosynthesis of the plant anticancer drug camptothecin.

Authors:  Emily Amor Stander; Thomas Dugé de Bernonville; Nicolas Papon; Vincent Courdavault
Journal:  Comput Struct Biotechnol J       Date:  2021-06-22       Impact factor: 7.271

9.  Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans.

Authors:  Yisong Liu; Qi Tang; Pi Cheng; Mingfei Zhu; Hui Zhang; Jiazhe Liu; Mengting Zuo; Chongyin Huang; Changqiao Wu; Zhiliang Sun; Zhaoying Liu
Journal:  Acta Pharm Sin B       Date:  2019-08-16       Impact factor: 11.413

10.  The regulation of ZCT1, a transcriptional repressor of monoterpenoid indole alkaloid biosynthetic genes in Catharanthus roseus.

Authors:  Samuel Mortensen; Jessica D Weaver; Suphinya Sathitloetsakun; Lauren F Cole; Noreen F Rizvi; Erin J Cram; Carolyn W T Lee-Parsons
Journal:  Plant Direct       Date:  2019-12-31
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