Literature DB >> 30296088

Flat-Histogram Monte Carlo as an Efficient Tool To Evaluate Adsorption Processes Involving Rigid and Deformable Molecules.

Matthew Witman1,2, Nathan A Mahynski3, Berend Smit1,2.   

Abstract

Monte Carlo simulations are the foundational technique for predicting thermodynamic properties of open systems where the process of interest involves the exchange of particles. Thus, they have been used extensively to computationally evaluate the adsorption properties of nanoporous materials and are critical for the in silico identification of promising materials for a variety of gas storage and chemical separation applications. In this work we demonstrate that a well-known biasing technique, known as "flat-histogram" sampling, can be combined with temperature extrapolation of the free energy landscape to efficiently provide significantly more useful thermodynamic information than standard open ensemble MC simulations. Namely, we can accurately compute the isosteric heat of adsorption and number of particles adsorbed for various adsorbates over an extremely wide range of temperatures and pressures from a set of simulations at just one temperature. We extend this derivation of the temperature extrapolation to adsorbates with intramolecular degrees of freedom when Rosenbluth sampling is employed. Consequently, the working capacity and isosteric heat can be computed for any given combined temperature/pressure swing adsorption process for a large range of operating conditions with both rigid and deformable adsorbates. Continuous thermodynamic properties can be computed with this technique at very moderate computational cost, thereby providing a strong case for its application to the in silico identification of promising nanoporous adsorbents.

Entities:  

Year:  2018        PMID: 30296088      PMCID: PMC7489491          DOI: 10.1021/acs.jctc.8b00534

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  18 in total

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Authors:  F Wang; D P Landau
Journal:  Phys Rev Lett       Date:  2001-03-05       Impact factor: 9.161

2.  Determining the density of states for classical statistical models: a random walk algorithm to produce a flat histogram.

Authors:  F Wang; D P Landau
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2001-10-17

3.  Evaluating surface tension using grand-canonical transition-matrix Monte Carlo simulation and finite-size scaling.

Authors:  Jeffrey R Errington
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-01-28

4.  Monte Carlo Simulation Methods for Computing Liquid-Vapor Saturation Properties of Model Systems.

Authors:  Kaustubh S Rane; Sabharish Murali; Jeffrey R Errington
Journal:  J Chem Theory Comput       Date:  2013-05-30       Impact factor: 6.006

5.  Continuous Fractional Component Monte Carlo:  An Adaptive Biasing Method for Open System Atomistic Simulations.

Authors:  Wei Shi; Edward J Maginn
Journal:  J Chem Theory Comput       Date:  2007-07       Impact factor: 6.006

6.  Determination of fluid-phase behavior using transition-matrix Monte Carlo: binary Lennard-Jones mixtures.

Authors:  Vincent K Shen; Jeffrey R Errington
Journal:  J Chem Phys       Date:  2005-02-08       Impact factor: 3.488

7.  Optimization of expanded ensemble methods.

Authors:  Fernando A Escobedo; Francisco J Martinez-Veracoechea
Journal:  J Chem Phys       Date:  2008-10-21       Impact factor: 3.488

8.  Multicomponent adsorption in mesoporous flexible materials with flat-histogram Monte Carlo methods.

Authors:  Nathan A Mahynski; Vincent K Shen
Journal:  J Chem Phys       Date:  2016-11-07       Impact factor: 3.488

9.  In silico screening of carbon-capture materials.

Authors:  Li-Chiang Lin; Adam H Berger; Richard L Martin; Jihan Kim; Joseph A Swisher; Kuldeep Jariwala; Chris H Rycroft; Abhoyjit S Bhown; Michael W Deem; Maciej Haranczyk; Berend Smit
Journal:  Nat Mater       Date:  2012-05-27       Impact factor: 43.841

10.  Computing the Heat of Adsorption using Molecular Simulations: The Effect of Strong Coulombic Interactions.

Authors:  T J H Vlugt; E García-Pérez; D Dubbeldam; S Ban; S Calero
Journal:  J Chem Theory Comput       Date:  2008-07       Impact factor: 6.006

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  4 in total

1.  Extrapolation and interpolation strategies for efficiently estimating structural observables as a function of temperature and density.

Authors:  Jacob I Monroe; Harold W Hatch; Nathan A Mahynski; M Scott Shell; Vincent K Shen
Journal:  J Chem Phys       Date:  2020-10-14       Impact factor: 3.488

2.  Parallel Prefetching for Canonical Ensemble Monte Carlo Simulations.

Authors:  Harold W Hatch
Journal:  J Phys Chem A       Date:  2020-08-25       Impact factor: 2.781

3.  Quasicontinuous Cooperative Adsorption Mechanism in Crystalline Nanoporous Materials.

Authors:  Bartosz Mazur; Filip Formalik; Kornel Roztocki; Volodymyr Bon; Stefan Kaskel; Alexander V Neimark; Lucyna Firlej; Bogdan Kuchta
Journal:  J Phys Chem Lett       Date:  2022-07-25       Impact factor: 6.888

4.  Deep neural network learning of complex binary sorption equilibria from molecular simulation data.

Authors:  Yangzesheng Sun; Robert F DeJaco; J Ilja Siepmann
Journal:  Chem Sci       Date:  2019-03-18       Impact factor: 9.825

  4 in total

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