Literature DB >> 30292349

Mutation Signatures Depend on Epigenomic Contexts.

Neil Coleman1, Subhajyoti De2.   

Abstract

Mutation signatures - the patterns of acquired genetic changes in somatic genomes - provide critical insights into DNA repair defects and exposure to mutagenic processes during development, aging, and cancer progression. Efforts to decipher the etiology of the emerging computationally predicted mutation signatures in cancer genomes are currently underway. Since chromatin and epigenomic contexts influence DNA damage and repair pathway choices, taking both epigenomic and sequence contexts of the mutations into consideration is likely to benefit interpretation of mutation signatures.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DNA repair; epigenome; mutagenesis; mutation signature; somatic mutation

Mesh:

Substances:

Year:  2018        PMID: 30292349     DOI: 10.1016/j.trecan.2018.08.001

Source DB:  PubMed          Journal:  Trends Cancer        ISSN: 2405-8025


  5 in total

1.  Clustered 8-Oxo-Guanine Mutations and Oncogenic Gene Fusions in Microsatellite-Unstable Colorectal Cancer.

Authors:  Russell W Madison; Xiaoju Hu; Vivek Ramanan; Zhuxuan Xu; Richard S P Huang; Ethan S Sokol; Garrett M Frampton; Alexa B Schrock; Siraj M Ali; Shridar Ganesan; Subhajyoti De
Journal:  JCO Precis Oncol       Date:  2022-05

2.  Mutational signatures associated with exposure to carcinogenic microplastic compounds bisphenol A and styrene oxide.

Authors:  Xiaoju Hu; Antara Biswas; Anchal Sharma; Halle Sarkodie; Ivy Tran; Indrani Pal; Subhajyoti De
Journal:  NAR Cancer       Date:  2021-03-01

3.  FERMI: A Novel Method for Sensitive Detection of Rare Mutations in Somatic Tissue.

Authors:  L Alexander Liggett; Anchal Sharma; Subhajyoti De; James DeGregori
Journal:  G3 (Bethesda)       Date:  2019-09-04       Impact factor: 3.154

4.  Mutational signature SBS8 predominantly arises due to late replication errors in cancer.

Authors:  Vinod Kumar Singh; Arnav Rastogi; Xiaoju Hu; Yaqun Wang; Subhajyoti De
Journal:  Commun Biol       Date:  2020-08-03

5.  Characteristics of mutational signatures of unknown etiology.

Authors:  Xiaoju Hu; Zhuxuan Xu; Subhajyoti De
Journal:  NAR Cancer       Date:  2020-09-25
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.