Literature DB >> 30292113

Defunct gold mine tailings are natural reservoir for unique bacterial communities revealed by high-throughput sequencing analysis.

Timothy Sibanda1, Ramganesh Selvarajan2, Titus Msagati3, Siddarthan Venkatachalam4, Stephen Meddows-Taylor5.   

Abstract

Mine tailing dumps are arguably one of the leading sources of environmental degradation with often both public health and ecologically consequences. The present study investigated the concentration of heavy metals in gold mine tailings, and used high throughput sequencing techniques to determine the microbial community diversity of these tailings using 16S rRNA gene based amplicon sequence analysis. The concentration of detected metals and metalloids followed the order Si > Al > Fe > K > Ca > Mg. The 16S rRNA gene based sequence analysis resulted in a total of 273,398 reads across the five samples, represented among 7 major phyla, 41 classes, 77 orders, 142 families and 247 major genera. Phylum Actinobacteria was the most dominant, followed by Proteobacteria, Firmicutes, Chloroflexi, Cyanobacteria, Bacteroidetes, Acidobacteria and Planctomycetes. Redundancy analysis (RDA) and pairwise correlation analysis positively correlated the distribution of Alphaproteobacteria and Gammaproteobacteria to Al and K; Actinobacteria to Cr and Chloroflexi to Si. Negative correlations were observed in the distribution of Bacteroidetes with respect to As concentrations, Actinobacteria to Al, and Alphaproteobacteria and Gammaproteobacteria to high As and Te content of the soils. Predictive functional analysis showed the presence of putative biosynthetic and degradative pathways across the five sample sites. The study concludes that mine tailing sites harbour diverse and unique microbial assemblages with potentially biotechnologically important genes for biosynthesis and biodegradation.
Copyright © 2018. Published by Elsevier B.V.

Entities:  

Keywords:  Environment; Functional genes; High-throughput sequence analysis; Microbial diversity; Tailings

Mesh:

Substances:

Year:  2018        PMID: 30292113     DOI: 10.1016/j.scitotenv.2018.09.380

Source DB:  PubMed          Journal:  Sci Total Environ        ISSN: 0048-9697            Impact factor:   7.963


  11 in total

1.  A critical review on environmental implications, recycling strategies, and ecological remediation for mine tailings.

Authors:  Da-Mao Xu; Chang-Lin Zhan; Hong-Xia Liu; Han-Zhi Lin
Journal:  Environ Sci Pollut Res Int       Date:  2019-11-15       Impact factor: 4.223

2.  Diversity and functional profile of bacterial communities at Lancaster acid mine drainage dam, South Africa as revealed by 16S rRNA gene high-throughput sequencing analysis.

Authors:  Thabile Lukhele; Ramganesh Selvarajan; Hlengilizwe Nyoni; Bheki Brilliance Mamba; Titus Alfred Makudali Msagati
Journal:  Extremophiles       Date:  2019-09-13       Impact factor: 2.395

3.  Bio-Matrix Pot Addition Enhanced the Vegetation Process of Iron Tailings by Pennisetum giganteum.

Authors:  Yihao Liu; Jinyang Yu; Zuyu Wang; Petri Penttinen; Xiumei Yu; Ke Zhao; Menggen Ma; Quanju Xiang; Yunfu Gu; Hanjun Liu; Xiaoping Zhang; Qiang Chen
Journal:  Front Microbiol       Date:  2022-04-07       Impact factor: 6.064

4.  Changes in diversity and composition of rhizosphere bacterial community during natural restoration stages in antimony mine.

Authors:  Renyan Duan; Yuxiang Lin; Jianing Zhang; Minyi Huang; Yihuan Du; Li Yang; Jing Bai; Guohong Xiang; Zhigao Wang; Yaqi Zhang
Journal:  PeerJ       Date:  2021-10-14       Impact factor: 2.984

5.  Unravelling the genetic and functional diversity of dominant bacterial communities involved in manure co-composting bioremediation of complex crude oil waste sludge.

Authors:  Onyedikachi Ubani; Harrison I Atagana; Ramganesh Selvarajan; Henry Jo Ogola
Journal:  Heliyon       Date:  2022-02-11

6.  Potential of tellurite resistance in heterotrophic bacteria from mining environments.

Authors:  Pedro Farias; Romeu Francisco; Paula V Morais
Journal:  iScience       Date:  2022-06-09

7.  Tailings microbial community profile and prediction of its functionality in basins of tungsten mine.

Authors:  Ana Paula Chung; Carina Coimbra; Pedro Farias; Romeu Francisco; Rita Branco; Francisco V Simão; Elsa Gomes; Alcides Pereira; Maria C Vila; António Fiúza; Martin S Mortensen; Søren J Sørensen; Paula V Morais
Journal:  Sci Rep       Date:  2019-12-20       Impact factor: 4.379

8.  Profiling Bacterial Diversity and Potential Pathogens in Wastewater Treatment Plants Using High-Throughput Sequencing Analysis.

Authors:  Cecilia Oluseyi Osunmakinde; Ramganesh Selvarajan; Bhekie B Mamba; Titus A M Msagati
Journal:  Microorganisms       Date:  2019-10-29

9.  Taxonomic and functional analyses reveal existence of virulence and antibiotic resistance genes in beach sand bacterial populations.

Authors:  Timothy Sibanda; Selvarajan Ramganesh
Journal:  Arch Microbiol       Date:  2021-01-20       Impact factor: 2.552

10.  Community diversity metrics, interactions, and metabolic functions of bacteria associated with municipal solid waste landfills at different maturation stages.

Authors:  Lerato Sekhohola-Dlamini; Ramganesh Selvarajan; Henry Joseph Odour Ogola; Memory Tekere
Journal:  Microbiologyopen       Date:  2020-12-12       Impact factor: 3.904

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