| Literature DB >> 30288111 |
Yuqian Liao1, Yulu Liao2, Jun Li2, Junyu Li2, Ying Fan3, Binghe Xu3.
Abstract
PURPOSE: Triple-negative breast cancer (TNBC) is more than a single disease. Identifying biomarkers to further subdivide TNBC patients with distinct outcome is of great importance. It has been reported that single-nucleotide polymorphisms (SNPs) in Aurora kinase A (AURKA) or Aurora kinase B (AURKB) are associated with the risk and survival of several cancers. But till now, there is no research about these polymorphisms in TNBC patients.Entities:
Keywords: Aurora kinase; TNBC; polymorphism; prognosis
Year: 2018 PMID: 30288111 PMCID: PMC6159783 DOI: 10.2147/CMAR.S174735
Source DB: PubMed Journal: Cancer Manag Res ISSN: 1179-1322 Impact factor: 3.989
Information for the SNPs genotyped in this study
| SNPs | Position | Location | Alleles | Gene | MAF in CHB |
|---|---|---|---|---|---|
| rs10485805 | 20:56370727 | Intron variant | A/G | 0.302 | |
| rs1468056 | 20:56390932 | Intron variant | C/G | 0.128 | |
| rs2236207 | 20:56392509 | utr variant 5 prime | A/G | 0.093 | |
| rs2298016 | 20:56384240 | Intron variant | C/G | 0.367 | |
| rs6099128 | 20:56390288 | Intron variant | G/T | 0.167 | |
| rs8173 | 20:56369735 | utr variant 3 prime | C/G | 0.395 | |
| rs7503353 | 17:8204661 | Downstream variant 500B | G/T | 0.163 | |
| rs11651993 | 17:8212456 | Upstream variant 2 KB | C/T | 0.105 | |
| rs11869914 | 17:8211831 | Upstream variant 2 KB | G/T | 0.386 | |
| rs2289590 | 17:8207446 | Intron variant | A/C | 0.267 | |
| rs3027257 | 17:8208935 | Intron variant | C/T | 0.267 |
Abbreviations: CHB, Han Chinese in Beijing; MAF, minor allele frequency; SNP, single-nucleotide polymorphism.
Clinicopathological characteristics and survival of TNBC
| Variables | Patients (%) | 5-year DFS (%) | HR (95% CI) | 5-year OS (%) | HR (95% CI) | ||
|---|---|---|---|---|---|---|---|
| Age (years) | |||||||
| ≤50 | 166 (60.8) | 68.9 | 1 (Ref) | 87.2 | 1 (Ref) | ||
| >50 | 107 (39.2) | 79.5 | 0.586 (0.339–1.011) | 0.055 | 86.8 | 0.876 (0.403–1.901) | 0.737 |
| Menopause | |||||||
| Pre | 142 (52.0) | 72.1 | 1 (Ref) | 90.1 | 1 (Ref) | ||
| Post | 131 (48.0) | 72.9 | 1.320 (0.806–2.160) | 0.270 | 83.8 | 1.271 (0.605–2.673) | 0.526 |
| Grade | |||||||
| 1–2 | 70 (25.6) | 68.9 | 1 (Ref) | 96.8 | 1 (Ref) | ||
| 3 | 152 (55.7) | 76.9 | 1.101 (0.609–1.992) | 0.750 | 79.5 | 3.640 (1.071–12.373) | 0.039 |
| UK | 51 (18.7) | 71.9 | 0.977 (0.469–2.034) | 0.950 | 91.1 | 2.219 (0.554–8.891) | 0.260 |
| Vascular invasion | |||||||
| Negative | 255 (93.4) | 73.5 | 1 (Ref) | 87.1 | 1 (Ref) | ||
| Positive | 18 (6.6) | 64.2 | 1.477 (0.636–3.427) | 0.364 | 82.6 | 2.108 (0.729–6.097) | 0.169 |
| Tumor size | |||||||
| ≤2 cm | 127 (46.5) | 83.5 | 1 (Ref) | 95.6 | 1 (Ref) | ||
| >2 cm | 146 (53.5) | 63.9 | 2.376 (1.377–4.098) | 0.002 | 80.3 | 3.983 (1.514–10.478) | 0.005 |
| Lymph node | |||||||
| Negative | 162 (59.3) | 81.0 | 1 (Ref) | 98.1 | 1 (Ref) | ||
| Positive | 111 (40.7) | 61.0 | 3.039 (1.822–5.068) | <0.001 | 72.1 | 13.219 (3.990–43.797) | <0.001 |
| TNM | |||||||
| I | 84 (30.8) | 85.4 | 1 (Ref) | 100.0 | 1 (Ref) | ||
| II | 137 (50.2) | 75.6 | 1.814 (0.852–3.860) | 0.122 | 92.9 | 5.801 (0.742–45.350) | 0.094 |
| III | 52 (19.0) | 45.5 | 7.272 (3.419–15.468) | <0.001 | 52.3 | 36.227 (4.811–272.806) | <0.001 |
Abbreviations: DFS, disease-free survival; OS, overall survival; Ref, reference; TNBC, triple-negative breast cancer; UK, unknown.
AURKA or AURKB genotypes and DFS
| Variables | Patients (%) | 5-year DFS (%) | Crude
| Adjusted
| ||
|---|---|---|---|---|---|---|
| HR (95% CI) | HR (95% CI) | |||||
| AURKB rs11651993 | ||||||
| TT | 207 (75.8) | 76.2 | 1 (Ref) | 1 (Ref) | ||
| TC | 58 (21.3) | 64.0 | 1.876 (1.087–3.237) | 0.024 | 1.838 (1.064–3.173) | 0.029 |
| CC | 8 (2.9) | 56.3 | 2.417 (0.745–7.841) | 0.142 | 2.162 (0.652–7.168) | 0.208 |
| TT vs TC + CC | 1.934 (1.149–3.254) | 0.013 | 1.876 (1.116–3.154) | 0.018 | ||
| TT + TC vs CC | 2.045 (0.639–6.543) | 0.228 | 1.868 (0.570–6.127) | 0.302 | ||
| AURKB rs2289590 | ||||||
| CC | 152 (55.7) | 68.1 | 1 (Ref) | 1 (Ref) | ||
| CA | 105 (38.5) | 77.0 | 0.562 (0.325–0.972) | 0.039 | 0.533 (0.307–0.927) | 0.026 |
| AA | 16 (5.8) | 87.5 | 0.357 (0.086–1.475) | 0.155 | 0.559 (0.130–2.400) | 0.434 |
| CC vs CA + AA | 0.531 (0.313–0.902) | 0.019 | 0.536 (0.315–0.912) | 0.021 | ||
| CC + CA vs AA | 0.438 (0.107–1.796) | 0.252 | 0.685 (0.161–2.922) | 0.609 | ||
Abbreviations: DFS, disease-free survival; OS, overall survival; Ref, reference.
AURKA or AURKB genotypes and overall survival
| Variables | 5-year OS (%) | Crude
| Adjusted
| ||
|---|---|---|---|---|---|
| HR (95% CI) | HR (95% CI) | ||||
| AURKA rs10485805 | |||||
| GG | 91.2 | 1 (Ref) | 1 (Ref) | ||
| GA | 78.9 | 2.177 (1.024–4.628) | 0.043 | 1.987 (0.912–4.328) | 0.084 |
| AA | 100.0 | – | – | ||
| GG vs GA + AA | 1.757 (0.830–3.719) | 0.141 | 1.605 (0.746–3.451) | 0.226 | |
| GG + GA vs AA | 0.043 (0.000–19.180) | 0.312 | – | ||
| AURKA rs6099128 | |||||
| TT | 88.4 | 1 (Ref) | 1 (Ref) | ||
| TG | 85.5 | 1.081 (0.434–2.693) | 0.868 | 1.128 (0.448–2.841) | 0.799 |
| GG | 45.0 | 3.248 (0.749–14.091) | 0.116 | 12.889 (2.386–69.627) | 0.003 |
| TT vs TG + GG | 1.296 (0.570–2.945) | 0.536 | 1.440 (0.627–3.308) | 0.391 | |
| TT + TG vs GG | 0.313 (0.073–1.339) | 0.117 | 12.499 (2.357–66.298) | 0.003 | |
Abbreviations: OS, overall survival; Ref, reference.
Figure 1Kaplan–Meier curve of OS for patients with different AURKA rs6099128 genotypes.
Abbreviation: OS, overall survival.
Figure 2Kaplan–Meier curve of DFS for patients with different AURKB rs11651993 genotypes.
Abbreviation: DFS, disease-free survival.
Figure 3Kaplan–Meier curve of DFS for patients with different AURKB rs2289590 genotypes.
Abbreviation: DFS, disease-free survival.
Subgroup analysis of polymorphisms and survival
| Variants | Subgroup | DFS
| OS
| ||
|---|---|---|---|---|---|
| HR (95% CI) | HR (95% CI) | ||||
| RS11651993 | Age ≤ 50 years | 1.942 (1.046–3.606) | 0.036 | 1.093 (0.358–3.333) | 0.876 |
| Age > 50 years | 1.913 (0.738–4.956) | 0.182 | 7.309 (1.817–29.402) | 0.005 | |
| Pre-menopausal | 1.314 (0.581–2.975) | 0.512 | 2.598 (0.842–8.015) | 0.097 | |
| Post-menopausal | 2.613 (1.309–5.218) | 0.006 | 1.806 (0.612–5.328) | 0.284 | |
| Grade 1–2 | 1.274 (0.442–3.671) | 0.654 | 0.033 (0.000–4,638.821) | 0.572 | |
| Grade 3 | 1.769 (0.864–3.623) | 0.119 | 2.801 (1.086–7.224) | 0.033 | |
| Grade UK | 3.480 (1.110–10.914) | 0.032 | 4.420 (0.810–24.130) | 0.086 | |
| Tumor size ≤2 cm | 1.844 (0.681–4.991) | 0.228 | 1.149 (0.119–11.093) | 0.904 | |
| Tumor size >2 cm | 1.990 (1.080–3.668) | 0.027 | 2.236 (0.966–5.178) | 0.060 | |
| LN negative | 3.520 (1.526–8.122) | 0.003 | 2.525 (0.210–30.414) | 0.466 | |
| LN positive | 1.377 (0.689–2.751) | 0.365 | 2.198 (0.965–5.006) | 0.061 | |
| RS2289590 | Age ≤ 50 years | 0.618 (0.337–1.135) | 0.121 | 1.228 (0.487–3.095) | 0.663 |
| Age > 50 years | 0.343 (0.113–1.042) | 0.059 | 1.229 (0.354–4.273) | 0.745 | |
| Pre-menopausal | 0.377 (0.161–0.884) | 0.025 | 0.978 (0.325–2.944) | 0.968 | |
| Post-menopausal | 0.676 (0.341–1.343) | 0.264 | 1.405 (0.509–3.878) | 0.512 | |
| Grade 1–2 | 0.528 (0.183–1.521) | 0.237 | 1.730 (0.144–20.752) | 0.665 | |
| Grade 3 | 0.358 (0.162–0.789) | 0.011 | 0.780 (0.306–1.989) | 0.602 | |
| Grade UK | 1.437 (0.481–4.293) | 0.516 | 5.701 (0.661–49.170) | 0.113 | |
| Tumor size ≤2 cm | 0.471 (0.168–1.322) | 0.153 | 2.041 (0.340–12.239) | 0.435 | |
| Tumor size >2 cm | 0.543 (0.293–1.006) | 0.052 | 1.084 (0.478–2.461) | 0.847 | |
| LN negative | 0.549 (0.226–1.334) | 0.185 | 95.034 (0.007–1280606) | 0.348 | |
| LN positive | 0.507 (0.262–0.983) | 0.044 | 0.858 (0.388–1.896) | 0.705 | |
Abbreviations: DFS, disease-free survival; OS, overall survival; Ref, reference; UK, unknown.