| Literature DB >> 30286208 |
Min-Jeong Lee1,2, Joo-Han Park3, Yeo Rae Moon4, Soo-Yeon Jo5, Dukyong Yoon5, Rae Woong Park5, Jong Cheol Jeong1, Inwhee Park1, Gyu-Tae Shin1, Heungsoo Kim1.
Abstract
PURPOSE: We aimed to develop a model of chronic kidney disease (CKD) progression for predicting the probability and time to progression from various CKD stages to renal replacement therapy (RRT), using 6 months of clinical data variables routinely measured at healthcare centers.Entities:
Mesh:
Year: 2018 PMID: 30286208 PMCID: PMC6171856 DOI: 10.1371/journal.pone.0204586
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Flow diagram for patient’s selection.
Baseline characteristics of the patients.
| Characteristics | No. (%) of patients | ||||
|---|---|---|---|---|---|
| Training set | Test set | ||||
| Demographics | |||||
| Age (years) | 60 (19–90) | 59 (19–97) | NS | ||
| Sex (male) | 728 (44.8) | 739 (45.7) | NS | ||
| Comorbidities | |||||
| DM | 640 (39.4) | 626 (38.7) | NS | ||
| HTN | 610 (37.5) | 562 (34.7) | .096 | ||
| GN | 299 (18.4) | 325 (20.1) | NS | ||
| SLE | 8 (0.5) | 12 (0.7) | NS | ||
| PKD | 28 (1.7) | 33 (2.0) | NS | ||
| Laboratory values | |||||
| Serum albumin | 4.00 (1.44–5.33) | 4.00 (1.49–5.10) | NS | ||
| Serum creatinine | 1.59 (0.63–13.50) | 1.55 (0.76–14.25) | NS | ||
| Serum hemoglobin | 11.75 (5.30–20.28) | 11.78 (5.44–17.60) | NS | ||
| Serum bicarbonate | 24.00 (11.50–33.57) | 23.97 (11.56–32.00) | NS | ||
| Serum BUN | 23.40 (6.60–145.85) | 23.19 (6.25–142.67) | NS | ||
| Serum calcium | 8.93 (5.95–12.03) | 8.90 (4.90–12.50) | NS | ||
| Serum phosphorus | 3.63 (1.00–8.99) | 3.64 (1.33–9.40) | NS | ||
| Serum potassium | 4.50 (2.41–6.73) | 4.50 (2.81–7.60) | NS | ||
| eGFR (MDRD) | 39.89 (15.32) | 41.07 (15.19) | .027 | ||
| eGFR (CKD-EPI) | 39.41 (15.65) | 40.60 (15.55) | .031 | ||
| Urine protein | NS | ||||
| Trace | 151 (9.3) | 162 (10.0) | |||
| 1 positive | 243 (15.0) | 236 (14.6) | |||
| 2 positive | 438 (27.0) | 402 (24.8) | |||
| 3 positive | 336 (20.7) | 317 (19.6) | |||
| 4 positive | 57 (3.5) | 58 (3.6) | |||
| Outcome | |||||
| Observation time | 1096 (182–5089) | 1306 (1003) | NS | ||
| Renal replacement therapy events | 530 (32.6) | 473 (29.2) | .037 | ||
Note. χ-test or Mann-Whitney U-test was used. Data are presented as number (%) or median (range)
*Integral means
†initial value.
‡p<0.05, p value above 0.10 replaced with “NS”(not significant).
Outcomes of model development using different modified values of variables.
| Modified values | R2 | Patients (n) |
|---|---|---|
| Baseline value | 0.342 | 1,508 |
| End value | 0.546 | 685 |
| Maximum | 0.395 | 1,612 |
| Minimum | 0.373 | 1,612 |
| Ratio of minimum to maximum | 0.260 | 1,612 |
| Integral mean | 0.404 | 1,612 |
| Slope of the minimum to maximum | 0.244 | 1,168 |
| Slope of initial to integral mean | 0.298 | 1,508 |
Regression coefficients and hazard ratios for variables in the risk prediction model at CKD stage 3 patients.
| Training set | ||||||
|---|---|---|---|---|---|---|
| Regression coefficient | SE | HR | 95% CI for HR | |||
| Lower | Higher | |||||
| –0.024 | 0.06 | 0.98 | 0.97 | 0.99 | <0.001 | |
| –0.424 | 0.14 | 0.65 | 0.50 | 0.86 | 0.002 | |
| 0.527 | 0.14 | 1.69 | 1.28 | 2.24 | <0.001 | |
| 1.068 | 0.62 | 2.91 | 0.89 | 9.56 | 0.079 | |
| –0.976 | 0.14 | 0.38 | 0.29 | 0.50 | <0.001 | |
| –0.078 | 0.05 | 0.93 | 0.85 | 1.01 | 0.093 | |
| 0.422 | 0.10 | 1.53 | 1.24 | 1.87 | <0.001 | |
| 0.217 | 0.15 | 1.24 | 0.93 | 1.65 | NS | |
| –0.050 | 0.01 | 0.95 | 0.94 | 0.96 | <0.001 | |
| 1.085 | 0.27 | 2.96 | 1.73 | 5.07 | <0.001 | |
| 1.253 | 0.24 | 3.50 | 2.18 | 5.62 | <0.001 | |
| 1.289 | 0.26 | 3.63 | 2.19 | 6.02 | <0.001 | |
| 1.520 | 0.36 | 4.57 | 2.27 | 9.22 | <0.001 | |
Note. R2 = 0.330, p <0.001.
HR = hazard ratio, CI = confidence interval.
*p<0.05
**p<0.01
***p<0.001, p value above 0.10 replaced with “NS”(not significant).
Regression coefficients and hazard ratios for variables in the risk prediction model at CKD stage 4 patients.
| Training set | ||||||
|---|---|---|---|---|---|---|
| Regression coefficient | SE | HR | 95% CI for HR | |||
| Lower | Higher | |||||
| –0.010 | 0.01 | 0.99 | 0.98 | 1.00 | NS | |
| –0.433 | 0.50 | 0.65 | 0.44 | 0.95 | 0.027 | |
| 0.397 | 0.21 | 1.49 | 0.98 | 2.25 | 0.059 | |
| -0.318 | 0.22 | 0.73 | 0.47 | 1.12 | NS | |
| 1.786 | 0.56 | 5.60 | 2.00 | 17.81 | 0.001 | |
| –0.109 | 0.07 | 0.90 | 0.78 | 1.03 | NS | |
| –0.016 | 0.01 | 0.98 | 0.97 | 1.00 | NS | |
| –0.318 | 0.19 | 0.73 | 0.50 | 1.06 | NS | |
| –0.107 | 0.02 | 0.90 | 0.87 | 0.93 | <0.001 | |
| 1.211 | 0.42 | 3.36 | 1.46 | 7.70 | 0.004 | |
| 1.279 | 0.39 | 3.59 | 1.67 | 7.72 | 0.001 | |
| 1.853 | 0.41 | 6.38 | 2.88 | 14.16 | <0.001 | |
| 2.539 | 0.56 | 12.67 | 4.23 | 37.89 | <0.001 | |
Note. R2 = 0.386, p<0.001.
HR = hazard ratio, CI = confidence interval.
*p<0.05
**p<0.01
***p<0.001, p value above 0.10 replaced with “NS”(not significant).
Regression coefficients and hazard ratios for variables in the risk prediction model at CKD stage 5 patients.
| Training set | ||||||
|---|---|---|---|---|---|---|
| Regression coefficient | SE | HR | 95% CI for HR | |||
| Lower | Higher | |||||
| –0.100 | 0.06 | 0.91 | 0.81 | 1.02 | 0.097 | |
| 0.015 | 0.01 | 1.02 | 1.00 | 1.03 | 0.013 | |
| –0.070 | 0.02 | 0.93 | 0.89 | 0.98 | 0.002 | |
| 0.669 | 0.29 | 1.95 | 1.11 | 3.43 | 0.019 | |
| 0.916 | 0.41 | 2.50 | 1.40 | 4.47 | 0.002 | |
| 0.988 | 0.56 | 2.69 | 0.90 | 8.06 | 0.078 | |
Note. R2 = 0.321, p<0.001.
HR = hazard ratio, CI = confidence interval.
*p<0.05
**p<0.01
***p<0.001.
Fig 2Predicted probability of starting renal replacement therapy.
A) Patient with RRT after 5 years of follow-up (age = 56 years, sex = female, DM = no, PKD = yes, albumin = 4.06g/dla, hemoglobin = 8.01g/dla, calcium = 8.31mg/dla, phosphorus = 3.16mg/dla, potassium = 4.95mmol/La, eGFR = 18.36, protein = 2+). B) Patient without RRT censored after 5 years of follow-up (age = 58 years, sex = male, DM = yes, PKD = no, albumin = 4.65g/dla, hemoglobin = 12.11g/dla, calcium = 9.70mg/dla, phosphorus = 3.10mg/dla, potassium = 4.02mmol/La, eGFR = 54.81, protein = negative). (aintegral mean value) Side lines are 95% confidence interval (CI).