Literature DB >> 30286199

Correction: Optimization of the standard genetic code according to three codon positions using an evolutionary algorithm.

Paweł Błażej, Małgorzata Wnętrzak, Dorota Mackiewicz, Paweł Mackiewicz.   

Abstract

[This corrects the article DOI: 10.1371/journal.pone.0201715.].

Entities:  

Year:  2018        PMID: 30286199      PMCID: PMC6171936          DOI: 10.1371/journal.pone.0205450

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


There is an error in the second sentence of the fourteenth paragraph of the Results section. The correct sentence is: The GD values for the first and third codon positions are negative, ranging from −12.8% to −49.1% (Fig 8B).
Fig 8

The GD measure calculated under four models of the genetic code (DEG, BLO, NUM, and GEN) when the polarity costs were minimized for three codon positions individually (A, B, and C) or as the sum of costs over all positions (D).

In Fig 8, the headings are missing. Please see the corrected Fig 8 here. The GD measure calculated under four models of the genetic code (DEG, BLO, NUM, and GEN) when the polarity costs were minimized for three codon positions individually (A, B, and C) or as the sum of costs over all positions (D).
  1 in total

1.  Optimization of the standard genetic code according to three codon positions using an evolutionary algorithm.

Authors:  Paweł Błażej; Małgorzata Wnętrzak; Dorota Mackiewicz; Paweł Mackiewicz
Journal:  PLoS One       Date:  2018-08-09       Impact factor: 3.240

  1 in total
  3 in total

1.  Large-scale in silico mutagenesis experiments reveal optimization of genetic code and codon usage for protein mutational robustness.

Authors:  Martin Schwersensky; Marianne Rooman; Fabrizio Pucci
Journal:  BMC Biol       Date:  2020-10-20       Impact factor: 7.431

2.  Little Evidence the Standard Genetic Code Is Optimized for Resource Conservation.

Authors:  Hana Rozhoňová; Joshua L Payne
Journal:  Mol Biol Evol       Date:  2021-10-27       Impact factor: 16.240

3.  On the Origin of Frameshift-Robustness of the Standard Genetic Code.

Authors:  Haiqing Xu; Jianzhi Zhang
Journal:  Mol Biol Evol       Date:  2021-09-27       Impact factor: 16.240

  3 in total

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