Literature DB >> 30284439

Application of C-Terminal 7-Azabicyclo[2.2.1]heptane to Stabilize β-Strand-like Extended Conformation of a Neighboring α-Amino Acid.

Luhan Zhai1, Siyuan Wang1, Masayuki Nara2, Koh Takeuchi3, Ichio Shimada3,4, Yuko Otani1, Tomohiko Ohwada1.   

Abstract

β-Strands are formed by extended linear peptide chains that are usually paired to form β-sheet structure through interstrand hydrogen bonding. Linking a structured organic molecule with α-amino acid(s) can enforce or stabilize β-strand-like extended structures of the jointed amino acids. Spectroscopic and simulation studies indicated that the presence of a C-terminal 7-azabicyclo[2.2.1]heptane amine (Abh) favors a β-strand-like extended conformation of the adjacent α-amino acid on the N side. The bridgehead substitution of the Abh unit biases the amide cis-trans equilibrium of the adjacent α-amino acid residue to cis conformation. The proximity, specified by the presence of bond paths (such as H-H bond path) between the bridgehead proton of Abh and the α-proton of the α-amino acid provides a driving force favoring the extended conformation, which is independent of solvents. These results provide a basis for de novo design of β-strand-mimicking extended peptides by using β-strand enforcer/stabilizer even in the absence of the interstrand hydrogen bonding.

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Year:  2018        PMID: 30284439     DOI: 10.1021/acs.joc.8b01756

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  4 in total

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Journal:  Chem Rev       Date:  2021-08-18       Impact factor: 72.087

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Authors:  Yuko Otani; Xin Liu; Hisashi Ohno; Siyuan Wang; Luhan Zhai; Aoze Su; Masatoshi Kawahata; Kentaro Yamaguchi; Tomohiko Ohwada
Journal:  Nat Commun       Date:  2019-01-28       Impact factor: 14.919

3.  Uncovering the Networks of Topological Neighborhoods in β-Strand and Amyloid β-Sheet Structures.

Authors:  Luhan Zhai; Yuko Otani; Tomohiko Ohwada
Journal:  Sci Rep       Date:  2019-07-24       Impact factor: 4.379

4.  Unexpected Resistance to Base-Catalyzed Hydrolysis of Nitrogen Pyramidal Amides Based on the 7-Azabicyclic[2.2.1]heptane Scaffold.

Authors:  Diego Antonio Ocampo Gutiérrez de Velasco; Aoze Su; Luhan Zhai; Satowa Kinoshita; Yuko Otani; Tomohiko Ohwada
Journal:  Molecules       Date:  2018-09-15       Impact factor: 4.411

  4 in total

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