Literature DB >> 30284205

Sequence Ion Structures and Dissociation Chemistry of Deprotonated Sucrose Anions.

Benjamin J Bythell1, Jordan M Rabus2, Ashley R Wagoner2, Maha T Abutokaikah2, Philippe Maître3.   

Abstract

We investigate the tandem mass spectrometry of regiospecifically labeled, deprotonated sucrose analytes. We utilize density functional theory calculations to model the pertinent gas-phase fragmentation chemistry of the prevalent glycosidic bond cleavages (B1-Y1 and C1-Z1 reactions) and compare these predictions to infrared spectroscopy experiments on the resulting B1 and C1 product anions. For the C1 anions, barriers to interconversion of the pyranose [α-glucose-H]-, C1 anions to entropically favorable ring-open aldehyde-terminated forms were modest (41 kJ mol-1) consistent with the observation of a band assigned to a carbonyl stretch at ~ 1680-1720 cm-1. For the B1 anions, our transition structure calculations predict the presence of both deprotonated 1,6-anhydroglucose and carbon 2-ketone ((4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)dihydro-2H-pyran-3(4H)-one) anion structures, with the latter predominating. This hypothesis is supported by our spectroscopic data which show diagnostic bands at 1600, 1674, and 1699 cm-1 (deprotonated carbon 2-ketone structures), and at ~ 1541 cm-1 (both types of structure) and RRKM rate calculations. The deprotonated carbon 2-ketone structures are also the lowest energy product B1 anions. Graphical Abstract ᅟ.

Entities:  

Keywords:  Carbohydrates; Collision-induced dissociation; Density functional theory; IRMPD

Year:  2018        PMID: 30284205     DOI: 10.1007/s13361-018-2065-0

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  56 in total

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Authors:  Anja Pfenninger; Michael Karas; Berndt Finke; Bernd Stahl
Journal:  J Am Soc Mass Spectrom       Date:  2002-11       Impact factor: 3.109

2.  Gas phase infrared spectroscopy of selectively prepared ions.

Authors:  J Lemaire; P Boissel; M Heninger; G Mauclaire; G Bellec; H Mestdagh; A Simon; S Le Caer; J M Ortega; F Glotin; P Maitre
Journal:  Phys Rev Lett       Date:  2002-12-18       Impact factor: 9.161

3.  Cationized Carbohydrate Gas-Phase Fragmentation Chemistry.

Authors:  Benjamin J Bythell; Maha T Abutokaikah; Ashley R Wagoner; Shanshan Guan; Jordan M Rabus
Journal:  J Am Soc Mass Spectrom       Date:  2016-11-28       Impact factor: 3.109

4.  Structural documentation of glycan epitopes: sequential mass spectrometry and spectral matching.

Authors:  David J Ashline; Andrew J S Hanneman; Hailong Zhang; Vernon N Reinhold
Journal:  J Am Soc Mass Spectrom       Date:  2014-01-03       Impact factor: 3.109

5.  Fragmentation of negative ions from carbohydrates: part 1. Use of nitrate and other anionic adducts for the production of negative ion electrospray spectra from N-linked carbohydrates.

Authors:  David J Harvey
Journal:  J Am Soc Mass Spectrom       Date:  2005-05       Impact factor: 3.109

6.  Assignment of the stereochemistry and anomeric configuration of structurally informative product ions derived from disaccharides: infrared photodissociation of glycosyl-glycolaldehydes in the negative ion mode.

Authors:  Brad Bendiak; Tammy T Fang
Journal:  Carbohydr Res       Date:  2010-09-07       Impact factor: 2.104

7.  Cryogenic Vibrational Spectroscopy Provides Unique Fingerprints for Glycan Identification.

Authors:  Chiara Masellis; Neelam Khanal; Michael Z Kamrath; David E Clemmer; Thomas R Rizzo
Journal:  J Am Soc Mass Spectrom       Date:  2017-06-22       Impact factor: 3.109

8.  Glycan Fingerprinting via Cold-Ion Infrared Spectroscopy.

Authors:  Eike Mucha; Ana Isabel González Flórez; Mateusz Marianski; Daniel A Thomas; Waldemar Hoffmann; Weston B Struwe; Heung S Hahm; Sandy Gewinner; Wieland Schöllkopf; Peter H Seeberger; Gert von Helden; Kevin Pagel
Journal:  Angew Chem Int Ed Engl       Date:  2017-06-08       Impact factor: 15.336

9.  Travelling-wave ion mobility and negative ion fragmentation of high-mannose N-glycans.

Authors:  David J Harvey; Charlotte A Scarff; Matthew Edgeworth; Weston B Struwe; Kevin Pagel; Konstantinos Thalassinos; Max Crispin; Jim Scrivens
Journal:  J Mass Spectrom       Date:  2016-03       Impact factor: 1.982

10.  Detailed glycan structural characterization by electronic excitation dissociation.

Authors:  Xiang Yu; Yan Jiang; Yajie Chen; Yiqun Huang; Catherine E Costello; Cheng Lin
Journal:  Anal Chem       Date:  2013-10-09       Impact factor: 6.986

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