Literature DB >> 30283818

Deoxyguanosine kinase mutation producing juvenile-onset mitochondrial myopathy.

F N U Komal1, Paolo M Moretti1, Aziz I Shaibani1.   

Abstract

Entities:  

Year:  2018        PMID: 30283818      PMCID: PMC6167180          DOI: 10.1212/NXG.0000000000000269

Source DB:  PubMed          Journal:  Neurol Genet        ISSN: 2376-7839


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Mitochondrial myopathies are associated with mutations of both mitochondrial and nuclear DNA. Deoxyguanosine kinase (DGUOK) is a nuclear gene responsible for maintaining the mitochondrial deoxynucleotide pool required for replication and maintenance of mitochondrial DNA (mtDNA). Homozygous or compound heterozygous DGUOK mutations are associated with decreased activity of the mtDNA-encoded respiratory chain complexes, mtDNA depletions[1-4] and deletions.[5] We describe a case of juvenile-onset mitochondrial myopathy associated with DGUOK-related multiple mtDNA deletions.

Case report

A 38-year-old woman presented with painless slowly progressive symmetrical proximal muscle weakness since she was 8 years old. On initial presentation, she reported difficulty climbing, holding her arms upright, running, and competing with her classmates. Her weakness was largely attributed to her being overweight. For 1 year before presentation, she had also developed diplopia in far vision. However, no primary eye disease was found. She denied shortness of breath, exercise-induced muscle cramps, hearing impairment, palpitations, seizures, and speech difficulty. Her medical history was significant for obsessive-compulsive disorder and Raynaud phenomena. Her family history included her mother and a brother with big calf muscles who were positive for proximal muscle weakness. Her neurologic examination was notable for limited eye abduction bilaterally and mild right lid ptosis. Other cranial nerves were intact. She had mild calf hypertrophy and scapular winging. She had mild proximal muscle weakness graded on the Oxford scale as 4/5 in deltoids, 4/5 in supraspinatus muscles, 3/5 in hip flexors, and 5/5 elsewhere. Ankle reflexes were diminished with no gait abnormality. Cardiac and ear examinations were normal. Her creatine kinase was elevated to 503 U/L. MRI of the pelvis and thighs without contrast was performed, which showed symmetric fatty infiltration of pelvic and thigh muscles with reduced muscle bulk. EMG did not reveal a myogenic or neurogenic pattern. Biopsy of the left biceps was consistent with a mitochondrial myopathy, with many ragged red and blue fibers, moderate variation in fiber morphology, and many cytochrome oxidase–negative and succinate dehydrogenase–positive fibers (figure, A).
Figure

COX:succinate dehydrogenase (SHD) stain and deoxyguanosine kinase (DGUOK) primary sequence

(A) Muscle biopsy showing many cytochrome oxidase–negative/SHD-positive (blue stained) fibers (×100 magnification). (B) Primary sequence of DGUOK showing the position of asparagine (N) in different species including humans (Hs), mouse (Mm), zebrafish (Dr), and Drosophila (Dm).

COX:succinate dehydrogenase (SHD) stain and deoxyguanosine kinase (DGUOK) primary sequence

(A) Muscle biopsy showing many cytochrome oxidase–negative/SHD-positive (blue stained) fibers (×100 magnification). (B) Primary sequence of DGUOK showing the position of asparagine (N) in different species including humans (Hs), mouse (Mm), zebrafish (Dr), and Drosophila (Dm). Next-generation sequencing and deletion/duplication analysis of 319 nuclear genes using the blood sample revealed 2 mutations in the DGUOK gene: c.195G>A and c.462T>A in exon 2 and 4, respectively. Parental data were not available to confirm cis or trans configuration. Mitochondrial genome sequencing and deletion analysis was performed using the muscle sample, which identified 3 large deletions of the mitochondrial genome: 10.7, 12.6, and 9.6 kb. The sum total of heteroplasmy of these deletions was estimated to be less than 15 percent as it was confirmed by sequencing and not by array comparative genomic hybridization. The patient was diagnosed with DGUOK-related autosomal recessive multiple mitochondrial deletion syndrome, producing proximal muscle weakness and external ophthalmoparesis. She was counseled about exercise, dietary, and supportive measures.

Discussion

Mitochondrial myopathy is a disease of skeletal muscles, with or without CNS involvement, caused by defective mitochondrial metabolism. It is produced by defects in nuclear or mtDNA. Several nuclear genes are responsible for replication and maintenance of mtDNA including POLG, POLG2, C10ORF2, TYMP, TK2, RR2MB, and DGUOK.[6] Defects in these genes affect mtDNA content (number of copies) or cause mtDNA deletions. Loss-of-function mutations in DGUOK are associated with autosomal recessive inheritance of 3 main phenotypes: mtDNA depletion syndrome-3; noncirrhotic portal hypertension; and autosomal recessive progressive external ophthalmoplegia (PEO) with mtDNA deletions. Mutations in DGUOK have largely been described in mtDNA depletion syndromes, producing a multisystem illness or isolated liver disease.[1,2,4] Myopathy has rarely been observed with early onset of symptoms.[3] Moreover, compared with cases with decreased mtDNA content, only a few cases with mtDNA deletions producing myopathy have been reported. Six such cases were reported in 2012, in which age at onset of limb or extraocular weakness ranged from 20 to 69 years, and the majority (5) were older than 40 years.[5] In contrast, our case presented with proximal muscle weakness at age 8 years and remained free of liver disease. Our participant harbors 2 mutations in the DGUOK gene, which have both been known to occur only in trans to other pathogenic variants, suggesting a trans configuration in our patient. The c.195G>A mutation is predicted to produce a p.Trp65Ter nonsense pathogenic variant. It has a frequency of 8.12 × 10−6 in a control population of normal individuals sequenced by next-generation sequencing (NGS).[7] It has been reported with neonatal hepatocerebral disease in trans to another truncating mutation.[4]. The second variant, c.462T>A, is predicted to result in the Asn154Lys substitution, with a significantly higher frequency of 1.34 × 10−4 in normal controls.[7] It has been reported in cases of adult-onset PEO in trans with other pathogenic variants.[5] The asparagine at position 154 (figure, B) is highly conserved in evolution from Drosophila melanogaster to humans, suggesting an important role in maintaining protein structure or function. Our case expands the phenotypic spectrum of DGUOK mutations and highlights the importance of NGS in children and adults to timely diagnose mitochondrial myopathy. The markedly slow progression of symptoms observed in our case may have contributed to the delay in diagnosis. Longitudinal studies are needed to further investigate the course and predict the outcomes in patients harboring DGUOK mutations.
  7 in total

1.  Recessive deoxyguanosine kinase deficiency causes juvenile onset mitochondrial myopathy.

Authors:  Adam H Buchaklian; Daniel Helbling; Stephanie M Ware; David P Dimmock
Journal:  Mol Genet Metab       Date:  2012-04-26       Impact factor: 4.797

2.  Hepatocerebral mitochondrial DNA depletion syndrome caused by deoxyguanosine kinase (DGUOK) mutations.

Authors:  Peter Freisinger; Nancy Fütterer; Erwin Lankes; Klaus Gempel; Thomas M Berger; Johannes Spalinger; Alexandra Hoerbe; Claudia Schwantes; Martin Lindner; René Santer; Martin Burdelski; Hansjörg Schaefer; Bernhard Setzer; Ulrich A Walker; Rita Horváth
Journal:  Arch Neurol       Date:  2006-08

Review 3.  Defects in mitochondrial DNA replication and human disease.

Authors:  William C Copeland
Journal:  Crit Rev Biochem Mol Biol       Date:  2012 Jan-Feb       Impact factor: 8.250

Review 4.  Mitochondrial DNA depletion syndromes: review and updates of genetic basis, manifestations, and therapeutic options.

Authors:  Ayman W El-Hattab; Fernando Scaglia
Journal:  Neurotherapeutics       Date:  2013-04       Impact factor: 7.620

5.  Clinical and molecular features of mitochondrial DNA depletion due to mutations in deoxyguanosine kinase.

Authors:  D P Dimmock; Q Zhang; C Dionisi-Vici; R Carrozzo; J Shieh; L-Y Tang; C Truong; E Schmitt; M Sifry-Platt; S Lucioli; F M Santorelli; C H Ficicioglu; M Rodriguez; K Wierenga; G M Enns; N Longo; M H Lipson; H Vallance; W J Craigen; F Scaglia; L-J Wong
Journal:  Hum Mutat       Date:  2008-02       Impact factor: 4.878

6.  Analysis of protein-coding genetic variation in 60,706 humans.

Authors:  Monkol Lek; Konrad J Karczewski; Eric V Minikel; Kaitlin E Samocha; Eric Banks; Timothy Fennell; Anne H O'Donnell-Luria; James S Ware; Andrew J Hill; Beryl B Cummings; Taru Tukiainen; Daniel P Birnbaum; Jack A Kosmicki; Laramie E Duncan; Karol Estrada; Fengmei Zhao; James Zou; Emma Pierce-Hoffman; Joanne Berghout; David N Cooper; Nicole Deflaux; Mark DePristo; Ron Do; Jason Flannick; Menachem Fromer; Laura Gauthier; Jackie Goldstein; Namrata Gupta; Daniel Howrigan; Adam Kiezun; Mitja I Kurki; Ami Levy Moonshine; Pradeep Natarajan; Lorena Orozco; Gina M Peloso; Ryan Poplin; Manuel A Rivas; Valentin Ruano-Rubio; Samuel A Rose; Douglas M Ruderfer; Khalid Shakir; Peter D Stenson; Christine Stevens; Brett P Thomas; Grace Tiao; Maria T Tusie-Luna; Ben Weisburd; Hong-Hee Won; Dongmei Yu; David M Altshuler; Diego Ardissino; Michael Boehnke; John Danesh; Stacey Donnelly; Roberto Elosua; Jose C Florez; Stacey B Gabriel; Gad Getz; Stephen J Glatt; Christina M Hultman; Sekar Kathiresan; Markku Laakso; Steven McCarroll; Mark I McCarthy; Dermot McGovern; Ruth McPherson; Benjamin M Neale; Aarno Palotie; Shaun M Purcell; Danish Saleheen; Jeremiah M Scharf; Pamela Sklar; Patrick F Sullivan; Jaakko Tuomilehto; Ming T Tsuang; Hugh C Watkins; James G Wilson; Mark J Daly; Daniel G MacArthur
Journal:  Nature       Date:  2016-08-18       Impact factor: 49.962

7.  Next-generation sequencing reveals DGUOK mutations in adult patients with mitochondrial DNA multiple deletions.

Authors:  Dario Ronchi; Caterina Garone; Andreina Bordoni; Purificacion Gutierrez Rios; Sarah E Calvo; Michela Ripolone; Michela Ranieri; Mafalda Rizzuti; Luisa Villa; Francesca Magri; Stefania Corti; Nereo Bresolin; Vamsi K Mootha; Maurizio Moggio; Salvatore DiMauro; Giacomo P Comi; Monica Sciacco
Journal:  Brain       Date:  2012-10-04       Impact factor: 13.501

  7 in total

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