Literature DB >> 30275593

Fast and accurate data collection for macromolecular crystallography using the JUNGFRAU detector.

Filip Leonarski1, Sophie Redford1, Aldo Mozzanica1, Carlos Lopez-Cuenca1, Ezequiel Panepucci1, Karol Nass1, Dmitry Ozerov1, Laura Vera1, Vincent Olieric1, Dominik Buntschu1, Roman Schneider1, Gemma Tinti1, Erik Froejdh1, Kay Diederichs2, Oliver Bunk1, Bernd Schmitt3, Meitian Wang4.   

Abstract

The accuracy of X-ray diffraction data is directly related to how the X-ray detector records photons. Here we describe the application of a direct-detection charge-integrating pixel-array detector (JUNGFRAU) in macromolecular crystallography (MX). JUNGFRAU features a uniform response on the subpixel level, linear behavior toward high photon rates, and low-noise performance across the whole dynamic range. We demonstrate that these features allow accurate MX data to be recorded at unprecedented speed. We also demonstrate improvements over previous-generation detectors in terms of data quality, using native single-wavelength anomalous diffraction (SAD) phasing, for thaumatin, lysozyme, and aminopeptidase N. Our results suggest that the JUNGFRAU detector will substantially improve the performance of synchrotron MX beamlines and equip them for future synchrotron light sources.

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Year:  2018        PMID: 30275593     DOI: 10.1038/s41592-018-0143-7

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  8 in total

1.  Nucleobase carbonyl groups are poor Mg2+ inner-sphere binders but excellent monovalent ion binders-a critical PDB survey.

Authors:  Filip Leonarski; Luigi D'Ascenzo; Pascal Auffinger
Journal:  RNA       Date:  2018-11-08       Impact factor: 4.942

2.  1 kHz fixed-target serial crystallography using a multilayer monochromator and an integrating pixel detector.

Authors:  A Tolstikova; M Levantino; O Yefanov; V Hennicke; P Fischer; J Meyer; A Mozzanica; S Redford; E Crosas; N L Opara; M Barthelmess; J Lieske; D Oberthuer; E Wator; I Mohacsi; M Wulff; B Schmitt; H N Chapman; A Meents
Journal:  IUCrJ       Date:  2019-08-17       Impact factor: 4.769

3.  JUNGFRAU detector for brighter x-ray sources: Solutions for IT and data science challenges in macromolecular crystallography.

Authors:  Filip Leonarski; Aldo Mozzanica; Martin Brückner; Carlos Lopez-Cuenca; Sophie Redford; Leonardo Sala; Andrej Babic; Heinrich Billich; Oliver Bunk; Bernd Schmitt; Meitian Wang
Journal:  Struct Dyn       Date:  2020-02-26       Impact factor: 2.920

4.  Towards the spatial resolution of metalloprotein charge states by detailed modeling of XFEL crystallographic diffraction.

Authors:  Nicholas K Sauter; Jan Kern; Junko Yano; James M Holton
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-02-04       Impact factor: 7.652

5.  Probing ligand binding of endothiapepsin by `temperature-resolved' macromolecular crystallography.

Authors:  Chia Ying Huang; Sylvain Aumonier; Sylvain Engilberge; Deniz Eris; Kate Mary Louise Smith; Filip Leonarski; Justyna Aleksandra Wojdyla; John H Beale; Dominik Buntschu; Anuschka Pauluhn; May Elizabeth Sharpe; Alexander Metz; Vincent Olieric; Meitian Wang
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-07-27       Impact factor: 5.699

6.  Beyond integration: modeling every pixel to obtain better structure factors from stills.

Authors:  Derek Mendez; Robert Bolotovsky; Asmit Bhowmick; Aaron S Brewster; Jan Kern; Junko Yano; James M Holton; Nicholas K Sauter
Journal:  IUCrJ       Date:  2020-10-24       Impact factor: 4.769

7.  Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase.

Authors:  Ming-Yue Lee; James Geiger; Andrii Ishchenko; Gye Won Han; Anton Barty; Thomas A White; Cornelius Gati; Alexander Batyuk; Mark S Hunter; Andrew Aquila; Sébastien Boutet; Uwe Weierstall; Vadim Cherezov; Wei Liu
Journal:  IUCrJ       Date:  2020-10-15       Impact factor: 4.769

8.  Chemical crystallography by serial femtosecond X-ray diffraction.

Authors:  Elyse A Schriber; Daniel W Paley; Robert Bolotovsky; Daniel J Rosenberg; Raymond G Sierra; Andrew Aquila; Derek Mendez; Frédéric Poitevin; Johannes P Blaschke; Asmit Bhowmick; Ryan P Kelly; Mark Hunter; Brandon Hayes; Derek C Popple; Matthew Yeung; Carina Pareja-Rivera; Stella Lisova; Kensuke Tono; Michihiro Sugahara; Shigeki Owada; Tevye Kuykendall; Kaiyuan Yao; P James Schuck; Diego Solis-Ibarra; Nicholas K Sauter; Aaron S Brewster; J Nathan Hohman
Journal:  Nature       Date:  2022-01-19       Impact factor: 69.504

  8 in total

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