Literature DB >> 3027382

Organization and nucleotide sequence of a densovirus genome imply a host-dependent evolution of the parvoviruses.

H Bando, J Kusuda, T Gojobori, T Maruyama, S Kawase.   

Abstract

The genome structure of a densovirus from a silkworm was determined by sequencing more than 85% of the complete genome DNA. This is the first report of the genome organization of an insect parvovirus deduced from the DNA sequence. In the viral genome, two large open reading frames designated 1 and 2 and one smaller open reading frame designated 3 were identified. The first two open reading frames shared the same strand, while the third was found in the complementary sequence. Computer analysis suggested that open reading frame 2 may encode all four structural proteins. The genome organization and a part of the nucleotide sequence were conserved among the insect densovirus, rodent parvoviruses, and a human dependovirus. These viruses may have diverged from a common ancestor.

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Year:  1987        PMID: 3027382      PMCID: PMC253980          DOI: 10.1128/JVI.61.2.553-560.1987

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  26 in total

1.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

2.  Promoter sequences of eukaryotic protein-coding genes.

Authors:  J Corden; B Wasylyk; A Buchwalder; P Sassone-Corsi; C Kedinger; P Chambon
Journal:  Science       Date:  1980-09-19       Impact factor: 47.728

3.  Construction of an infectious molecular clone of the autonomous parvovirus minute virus of mice.

Authors:  M J Merchlinsky; P J Tattersall; J J Leary; S F Cotmore; E M Gardiner; D C Ward
Journal:  J Virol       Date:  1983-07       Impact factor: 5.103

4.  A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.

Authors:  J Messing; J Vieira
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

5.  Nucleotide sequence and organization of the adeno-associated virus 2 genome.

Authors:  A Srivastava; E W Lusby; K I Berns
Journal:  J Virol       Date:  1983-02       Impact factor: 5.103

6.  Classification and nomenclature of viruses. Fourth report of the International Committee on Taxonomy of Viruses.

Authors: 
Journal:  Intervirology       Date:  1982       Impact factor: 1.763

7.  A model of evolutionary base substitutions and its application with special reference to rapid change of pseudogenes.

Authors:  N Takahata; M Kimura
Journal:  Genetics       Date:  1981-07       Impact factor: 4.562

8.  Rapid similarity searches of nucleic acid and protein data banks.

Authors:  W J Wilbur; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1983-02       Impact factor: 11.205

9.  The complete DNA sequence of minute virus of mice, an autonomous parvovirus.

Authors:  C R Astell; M Thomson; M Merchlinsky; D C Ward
Journal:  Nucleic Acids Res       Date:  1983-02-25       Impact factor: 16.971

10.  Parvovirus genome: nucleotide sequence of H-1 and mapping of its genes by hybrid-arrested translation.

Authors:  S L Rhode; P R Paradiso
Journal:  J Virol       Date:  1983-01       Impact factor: 5.103

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  14 in total

1.  Cloning of an avian adeno-associated virus (AAAV) and generation of recombinant AAAV particles.

Authors:  Ioannis Bossis; John A Chiorini
Journal:  J Virol       Date:  2003-06       Impact factor: 5.103

Review 2.  Parvovirus replication.

Authors:  K I Berns
Journal:  Microbiol Rev       Date:  1990-09

3.  Structural analysis on the single-stranded genomic DNAs of the virus newly isolated from silkworm: the DNA molecules share a common terminal sequence.

Authors:  H Bando; H Choi; Y Ito; M Nakagaki; S Kawase
Journal:  Arch Virol       Date:  1992       Impact factor: 2.574

4.  Characterization of the genome structure of Bombyx mori densovirus (China isolate).

Authors:  Yong Jie Wang; Qin Yao; Ke Ping Chen; Yong Wang; Jian Lu; Xu Han
Journal:  Virus Genes       Date:  2006-10-18       Impact factor: 2.332

5.  Regulated expression of the feline panleukopenia virus P38 promoter on extrachromosomal FPV/EBV chimeric plasmids.

Authors:  D L Clemens; J O Carlson
Journal:  J Virol       Date:  1989-06       Impact factor: 5.103

6.  Characterization of the structural gene promoter of Aedes aegypti densovirus.

Authors:  T W Ward; M W Kimmick; B N Afanasiev; J O Carlson
Journal:  J Virol       Date:  2001-02       Impact factor: 5.103

7.  Biochemical characterization of Junonia coenia densovirus nonstructural protein NS-1.

Authors:  Chuantian Ding; Masashi Urabe; Max Bergoin; Robert M Kotin
Journal:  J Virol       Date:  2002-01       Impact factor: 5.103

8.  Evolutionary relationships among parvoviruses: virus-host coevolution among autonomous primate parvoviruses and links between adeno-associated and avian parvoviruses.

Authors:  V V Lukashov; J Goudsmit
Journal:  J Virol       Date:  2001-03       Impact factor: 5.103

9.  Coevolution of persistently infecting small DNA viruses and their hosts linked to host-interactive regulatory domains.

Authors:  F F Shadan; L P Villarreal
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

Review 10.  The evolution of small DNA viruses of eukaryotes: past and present considerations.

Authors:  F F Shadan; L P Villarreal
Journal:  Virus Genes       Date:  1995       Impact factor: 2.332

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