| Literature DB >> 30271865 |
Yusuke Nomura1, Chie Fukui1, Yuki Morishita1, Yuji Haishima1.
Abstract
INTRODUCTION: Multipotent mesenchymal stem cells (MSCs) are widespread in adult organisms and are implicated in tissue maintenance and repair, regulation of hematopoiesis, and immunologic responses. Human (h)MSCs have applications in tissue engineering, cell-based therapy, and medical devices but it is unclear how they respond to unfavorable conditions, such as hypoxia or inflammation after transplantation in vivo. Although endotoxin testing is required for evaluating the quality and safety of transplanted MSCs, no reports on their dose response to endotoxins are available to establish the limits for in vitro MSC culture systems. In the present study, we aimed to accurately quantify the risk of endotoxin contamination in cell culture systems to establish an acceptable endotoxin limit for the differentiation of hMSC osteoblasts and adipocytes.Entities:
Keywords: (h)ADSC, (human) adipose-derived stem cell; (h)MSC, (human) mesenchymal stem cell; BMP, Bone morphogenetic protein; Bone differentiation; CD, cluster of differentiation; Endotoxin limit; FGF, Fibroblast growth factor; Human mesenchymal stem cells; LC-MS/MS, liquid chromatograph-tandem mass spectrometry; LPS, Lipopolysaccharide; NOAEL, no-observed-adverse-effect level; Regenerative medicine products; TLR, Toll-like receptor
Year: 2018 PMID: 30271865 PMCID: PMC6149188 DOI: 10.1016/j.reth.2018.01.002
Source DB: PubMed Journal: Regen Ther ISSN: 2352-3204 Impact factor: 3.419
Fig. 1Evaluation of cell differentiation by staining. Nuclei (a), lipid droplets (b), and HAp (c) were stained using Hoechst 33258, BODPY lipid probes, and OsteoImage mineralization assay, respectively.
Fig. 2Effect of endotoxin on hMSC adipocyte differentiation. Adipocyte differentiation scores (AD scores) of hMSC-1 (a), hMSC-2 (b), hMSC-3 (c), and hADSC (d) cells cultured for 7 or 14 d in media containing various endotoxin concentrations. AD score = (lipid droplet area)/(number of cells). Data are presented as the mean ± SD (n = 4); *p < 0.05 vs. the control (0 ng/ml) group.
Fig. 3Effect of endotoxin on hMSC osteoblast differentiation. Osteoblast differentiation scores (OD scores) of hMSC-1 (a), hMSC-2 (b), hMSC-3 (c), and hADSC (d) cells cultured for 14, 21, or 28 d in media containing various endotoxin concentrations. OD score = (HAp area)/(number of cells). Data are presented as the mean ± SD (n = 4); *p < 0.05 vs. the control (0 ng/mL) group.
Abbreviated list of osteogenesis proteins induced in hMSCs by endotoxin.
| Protein ID | Peptide count | Expression ratio [LPS(+)/control] | |||||
|---|---|---|---|---|---|---|---|
| Code | Name | Score | Day 1 | Day 2 | Day 3 | Day 4 | |
| [Growth factor and the related protein] | |||||||
| FGF2 | Heparin-binding growth factor 2 | 32.0 | 1 | 11.3 | – | 1.0 | 0.2 |
| FGFR2 | Fibroblast growth factor receptor 2 | 25.8 | 1 | 103.4 | 1.4 | – | – |
| NED4L | E3 ubiquitin-protein ligase NEDD4-like | 25.5 | 1 | 36.2 | – | – | – |
| PHF7 | PHD finger protein 7 | 32.0 | 1 | 14.0 | – | – | 0.0 |
| SH3G2 | Endophilin-A1 | 54.5 | 2 | 3.0 | 0.6 | 1.4 | 52.9 |
| STA5A | Signal transducer and activator of transcription 5A | 29.4 | 1 | 55.7 | 19.9 | 0.7 | – |
| STA5B | Signal transducer and activator of transcription 5B | 29.4 | 1 | 55.7 | 19.9 | 0.7 | – |
| TSC1 | Hamartin | 35.6 | 2 | 2.1 | 8.7 | 0.5 | 11.0 |
| AKT3 | RAC-gamma serine/threonine-protein kinase | 23.8 | 2 | 1.3 | 2.1 | 1.6 | 1.7 |
| BMR1A | Bone morphogenetic protein receptor type-1A | 25.7 | 1 | – | ∞ | – | – |
| CORL2 | Ladybird homeobox corepressor 1-like protein | 22.3 | 1 | – | 7.5 | – | – |
| IRS4 | Insulin receptor substrate 4 | 24.9 | 1 | – | 30.1 | – | – |
| UCHL3 | Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 43.0 | 2 | – | 2.1 | – | 116.1 |
| AKT1 | RAC-alpha serine/threonine-protein kinase | 30.2 | 3 | 1.2 | 1.4 | 4.3 | 4.0 |
| ASTE1 | Protein asteroid homolog 1 | 24.5 | 2 | 0.9 | – | 2.4 | – |
| CD109 | CD109 antigen | 34.7 | 1 | 1.2 | – | 8.1 | – |
| FGF12 | Fibroblast growth factor 12 | 26.5 | 1 | – | – | ∞ | – |
| NCK2 | Cytoplasmic protein NCK2 | 19.7 | 1 | – | – | 14.5 | – |
| P55G | Phosphatidylinositol 3-kinase regulatory subunit gamma | 28.5 | 1 | – | – | 17.6 | – |
| P85A | Phosphatidylinositol 3-kinase regulatory subunit alpha | 28.5 | 2 | – | – | 17.6 | 0.4 |
| STAT2 | Signal transducer and activator of transcription 2 | 49.0 | 3 | – | 1.5 | ∞ | – |
| TWST1 | Twist-related protein 1 | 20.9 | 1 | – | – | 3.0 | – |
| BMP3B | Bone morphogenetic protein 3b | 19.6 | 1 | – | – | – | 2.6 |
| ESRP1 | Epithelial splicing regulatory protein 1 | 34.8 | 1 | 1.4 | 0.9 | 0.2 | ∞ |
| ESRP2 | Epithelial splicing regulatory protein 2 | 34.8 | 1 | 1.4 | 0.9 | 0.2 | ∞ |
| IF2B2 | Insulin-like growth factor 2 mRNA-binding protein 2 | 66.7 | 4 | – | 1.2 | 1.1 | 2.2 |
| IF2B3 | Insulin-like growth factor 2 mRNA-binding protein 3 | 31.2 | 2 | – | 0.8 | 1.1 | 3.2 |
| MINT | Msx2-interacting protein | 42.6 | 4 | 1.1 | 0.6 | 1.3 | 2.0 |
| TISB | Butyrate response factor 1 | 27.2 | 1 | – | – | – | 26.1 |
| WWP1 | NEDD4-like E3 ubiquitin-protein ligase WWP1 | 22.9 | 1 | – | – | – | 18.0 |
| [Hormonal steroid] | |||||||
| AK1C3 | Aldo-keto reductase family 1 member C3 | 88.9 | 4 | 2.7 | 1.1 | 41.8 | 3.2 |
| AK1C4 | Aldo-keto reductase family 1 member C4 | 50.6 | 2 | 22.9 | 1.1 | 177.9 | 1.3 |
| ARIP4 | Helicase ARIP4 | 23.2 | 1 | ∞ | – | 0.0 | 1.8 |
| CSN6 | COP9 signalosome complex subunit 6 | 42.1 | 2 | 3.5 | 0.7 | – | ∞ |
| FKBP4 | FK506-binding protein 4 | 61.1 | 2 | 3.1 | 0.3 | – | 2.8 |
| MCR | Mineralocorticoid receptor | 27.4 | 1 | ∞ | – | – | – |
| PGM5 | Phosphoglucomutase-like protein 5 | 52.9 | 1 | ∞ | 0.7 | 2.8 | 1.3 |
| PRP6 | Pre-mRNA-processing factor 6 | 27.1 | 2 | 11.3 | 0.7 | – | – |
| SRCAP | Helicase SRCAP | 32.0 | 1 | ∞ | – | 0.7 | – |
| GREB1 | Protein GREB1 | 39.2 | 2 | 1.3 | 172.9 | 0.7 | – |
| MAGAB | Melanoma-associated antigen 11 | 24.8 | 1 | – | 4.9 | – | – |
| PGRC1 | Membrane-associated progesterone receptor component 1 | 60.8 | 3 | 1.1 | 2.0 | 3.6 | 0.4 |
| AK1C1 | Aldo-keto reductase family 1 member C1 | 122.3 | 7 | 1.6 | 1.1 | 3.1 | 1.9 |
| AK1C2 | Aldo-keto reductase family 1 member C2 | 110.2 | 5 | 2.0 | 1.1 | 2.2 | 1.2 |
| ANM1 | Protein arginine N-methyltransferase 1 | 113.3 | 11 | 0.6 | 1.0 | 2.4 | 1.5 |
| DHB11 | Estradiol 17-beta-dehydrogenase 11 | 18.1 | 1 | – | – | 6.7 | – |
| NCOA2 | Nuclear receptor coactivator 2 | 27.1 | 1 | – | – | – | ∞ |
| STAM2 | Signal transducing adapter molecule 2 | 36.0 | 1 | 0.8 | 1.3 | – | 3.5 |
| [Glutamate] | |||||||
| CMC1 | Calcium-binding mitochondrial carrier protein Aralar1 | 29.1 | 2 | 3.4 | 1.1 | 71.4 | 0.3 |
| GRIK3 | Glutamate receptor, ionotropic kainate 3 | 21.2 | 1 | ∞ | – | – | – |
| GRM3 | Metabotropic glutamate receptor 3 | 29.5 | 1 | ∞ | – | – | – |
| RIC8A | Synembryn-A | 82.2 | 6 | 2.0 | 1.7 | 1.2 | 1.2 |
| NARG1 | NMDA receptor-regulated protein 1 | 86.3 | 4 | 1.6 | 3.0 | 1.8 | 1.1 |
| PRAF2 | PRA1 family protein 2 | 65.2 | 2 | 1.2 | 2.5 | 0.9 | 0.9 |
| SHAN1 | SH3 and multiple ankyrin repeat domains protein 1 | 40.5 | 3 | 1.0 | ∞ | 0.0 | 1.1 |
| CMC2 | Calcium-binding mitochondrial carrier protein Aralar2 | 71.8 | 2 | 1.5 | 0.7 | 3.6 | 1.1 |
| NMDE3 | Glutamate [NMDA] receptor subunit epsilon-3 | 26.5 | 1 | – | – | 51.6 | – |
| GRIK5 | Glutamate receptor, ionotropic kainate 5 | 23.1 | 1 | – | – | – | 37.3 |
| [Vitamin D] | |||||||
| ARI1A | AT-rich interactive domain-containing protein 1A | 26.7 | 2 | – | 74.4 | – | ∞ |
| NR2C2 | Nuclear receptor subfamily 2 group C member 2 | 29.8 | 1 | – | – | – | 6.9 |
| SMRC1 | SWI/SNF complex subunit SMARCC1 | 115.1 | 3 | 1.0 | 1.1 | 0.9 | 3.9 |
| SP100 | Nuclear autoantigen Sp-100 | 40.4 | 2 | 0.1 | 1.1 | 1.1 | 56.8 |
| [GABA] | |||||||
| ACBP | Acyl-CoA-binding protein | 66.6 | 3 | 2.5 | 0.5 | 1.2 | 0.7 |
| ARMET | Protein ARMET | 90.5 | 7 | 2.6 | 0.5 | 0.5 | 0.7 |
| KCTD8 | BTB/POZ domain-containing protein KCTD8 | 47.6 | 3 | 48.1 | 1.7 | 0.9 | 1.3 |
| [Ephrin] | |||||||
| EPHA7 | Ephrin type-A receptor 7 | 23.2 | 1 | – | – | – | 7.9 |
| [Hedgehog] | |||||||
| CF170 | Uncharacterized protein C6orf170 | 24.0 | 1 | 5.4 | – | – | 0.0 |
| DISP1 | Protein dispatched homolog 1 | 35.4 | 1 | – | 54.3 | – | – |
| PTBP2 | Polypyrimidine tract-binding protein 2 | 60.3 | 3 | 1.3 | 2.4 | 1.0 | 1.3 |
| [Homeobox] | |||||||
| HXA6 | Homeobox protein Hox-A6 | 31.6 | 2 | 20.4 | – | – | – |
| ZHX3 | Zinc fingers and homeoboxes protein 3 | 35.7 | 1 | 25.5 | – | – | – |
| [ECM] | |||||||
| ATS5 | A disintegrin and metalloproteinase with thrombospondin motifs 5 | 33.5 | 1 | 20.8 | – | – | – |
| ITIH2 | Inter-alpha-trypsin inhibitor heavy chain H2 | 33.0 | 1 | 22.8 | 0.0 | 0.7 | 1.8 |
| CO1A1 | Collagen alpha-1(I) chain | 177.3 | 14 | 2.0 | 0.7 | 0.7 | 1.4 |
| CO7A1 | Collagen alpha-1(VII) chain | 42.2 | 1 | 58.6 | 0.8 | – | – |
| PDLI1 | PDZ and LIM domain protein 1 | 133.9 | 9 | 2.2 | 0.8 | 0.7 | 2.5 |
| COKA1 | Collagen alpha-1(XX) chain | 30.4 | 2 | 1.3 | 8.8 | 0.0 | – |
| COOA1 | Collagen alpha-1(XXIV) chain | 27.7 | 1 | – | ∞ | 0.0 | 1.2 |
| LAMB2 | Laminin subunit beta-2 | 34.0 | 1 | 1.3 | ∞ | 0.8 | 1.4 |
| TENR | Tenascin-R | 32.2 | 1 | – | 0.5 | 3.9 | – |
| CHST9 | Carbohydrate sulfotransferase 9 | 24.4 | 1 | – | – | 2.3 | – |
| CO4A4 | Collagen alpha-4(IV) chain | 37.9 | 2 | 1.3 | 1.2 | 2.4 | 1.2 |
| CO6A2 | Collagen alpha-2(VI) chain | 149.2 | 8 | 0.5 | 1.3 | 2.1 | 0.9 |
| CO9A3 | Collagen alpha-3(IX) chain | 21.3 | 1 | – | – | 2.1 | – |
| COFA1 | Collagen alpha-1(XV) chain | 28.6 | 2 | 1.3 | 0.6 | 2.5 | 1.7 |
| ITAV | Integrin alpha-V | 118.0 | 10 | 1.5 | 0.8 | 2.2 | 1.4 |
| TSP2 | Thrombospondin-2 | 46.1 | 1 | 1.0 | 0.8 | 3.0 | 1.2 |
| PCOC2 | Procollagen C-endopeptidase enhancer 2 | 30.6 | 2 | 0.9 | 0.9 | 1.3 | 9.1 |
| HPSE2 | Heparanase-2 | 28.4 | 1 | – | 0.0 | 0.7 | 104.5 |
| LAMA5 | Laminin subunit alpha-5 | 27.0 | 1 | – | – | – | 3.6 |
| [Wnt signaling] | |||||||
| LRP6 | Low-density lipoprotein receptor-related protein 6 | 33.5 | 2 | ∞ | 0.9 | 0.0 | 0.0 |
| SEM7A | Semaphorin-7A | 44.4 | 2 | 2.4 | – | – | – |
| APC | Adenomatous polyposis coli protein | 30.5 | 1 | 1.2 | 3.5 | – | 151.9 |
| CYBP | Calcyclin-binding protein | 67.0 | 3 | 1.0 | 4.2 | 1.2 | 1.3 |
| MESD2 | Mesoderm development candidate 2 | 23.1 | 1 | 0.8 | 67.9 | – | 1.4 |
| PFTK1 | Serine/threonine-protein kinase PFTAIRE-1 | 28.3 | 1 | 1.0 | 3.1 | – | – |
| MACF1 | Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 | 35.9 | 2 | 0.0 | 1.0 | 2.1 | 1.0 |
| PYGO2 | Pygopus homolog 2 | 20.4 | 1 | – | – | 4.3 | – |
| WNT7A | Protein Wnt-7a | 29.3 | 1 | – | – | 12.1 | – |
| GLIS2 | Zinc finger protein GLIS2 | 21.4 | 1 | 0.0 | – | – | 3.9 |
| TFR1 | Transferrin receptor protein 1 | 77.9 | 7 | 0.7 | 1.4 | 1.1 | 2.0 |
| [Other] | |||||||
| ATS4 | A disintegrin and metalloproteinase with thrombospondin motifs 4 | 18.2 | 1 | ∞ | – | – | – |
| CHD9 | Chromodomain-helicase-DNA-binding protein 9 | 32.5 | 1 | ∞ | – | – | – |
| NLP | Ninein-like protein | 30.3 | 1 | 168.8 | ∞ | 50.1 | – |
| NO66 | Nucleolar protein 66 | 26.8 | 1 | ∞ | – | – | – |
| PCNA | Proliferating cell nuclear antigen | 229.7 | 10 | 2.5 | 1.8 | 1.0 | 0.9 |
| LBN | Limbin | 49.1 | 1 | – | 10.1 | 0.5 | 1.2 |
| OMD | Osteomodulin | 31.6 | 1 | – | 6.6 | – | – |
| TENC1 | Tensin-like C1 domain-containing phosphatase | 27.4 | 1 | 0.5 | 10.8 | 0.7 | – |
| ARSE | Arylsulfatase E | 26.0 | 1 | – | – | – | ∞ |
| ZNRF2 | E3 ubiquitin-protein ligase ZNRF2 | 26.3 | 2 | 0.0 | – | 1.2 | 9.2 |
Over 2-fold changes in expression levels are displayed in shadowed boxes.
Abbreviated list of immune system proteins induced in hMSCs by endotoxin.
| Protein ID | Peptide count | Expression ratio [LPS(+)/control] | |||||
|---|---|---|---|---|---|---|---|
| Code | Name | Score | Day 1 | Day 2 | Day 3 | Day 4 | |
| [Cytokine] | |||||||
| HNRPQ | Heterogeneous nuclear ribonucleoprotein Q | 147.6 | 12 | 2.4 | 0.9 | 1.5 | 1.0 |
| I17RB | Interleukin-17 receptor B | 38.9 | 1 | 2.7 | 1.0 | 0.9 | 1.6 |
| IL16 | Pro-interleukin-16 | 21.3 | 1 | 7.5 | – | – | – |
| IL1R1 | Interleukin-1 receptor type I | 27.0 | 1 | ∞ | – | – | – |
| LKHA4 | Leukotriene A-4 hydrolase | 109.3 | 5 | 79.4 | 0.6 | 1.1 | 0.6 |
| NALP4 | NACHT, LRR and PYD domains-containing protein 4 | 22.7 | 1 | 6.5 | – | – | – |
| NLF1 | Nuclear-localized factor 1 | 24.5 | 1 | ∞ | – | – | – |
| CCR9 | C—C chemokine receptor type 9 | 24.6 | 1 | – | ∞ | 0.0 | – |
| GBP2 | Interferon-induced guanylate-binding protein 2 | 33.8 | 2 | – | ∞ | – | 1.5 |
| KS6A5 | Ribosomal protein S6 kinase alpha-5 | 28.8 | 1 | 1.5 | 6.5 | – | – |
| MAST2 | Microtubule-associated serine/threonine-protein kinase 2 | 28.4 | 1 | – | 12.7 | – | – |
| SENP5 | Sentrin-specific protease 5 | 29.4 | 1 | – | 3.0 | 0.4 | – |
| UCRP | Interferon-induced 17 kDa protein | 171.1 | 5 | – | 69.9 | 14.9 | 25.6 |
| CEBPG | CCAAT/enhancer-binding protein gamma | 28.0 | 1 | – | – | 44.6 | – |
| IL6RB | Interleukin-6 receptor subunit beta | 32.0 | 1 | – | – | 89.2 | 1.3 |
| NALP7 | NACHT, LRR and PYD domains-containing protein 7 | 15.0 | 1 | – | – | 12.9 | – |
| PAI1 | Plasminogen activator inhibitor 1 | 69.6 | 5 | 1.0 | 0.5 | 2.7 | 3.1 |
| TYK2 | Non-receptor tyrosine-protein kinase TYK2 | 24.9 | 1 | 1.0 | – | 29.1 | ∞ |
| CSDE1 | Cold shock domain-containing protein E1 | 119.5 | 5 | 0.8 | 1.0 | 0.9 | 2.5 |
| ELAV1 | ELAV-like protein 1 | 84.0 | 4 | 0.8 | 1.0 | 0.4 | 27.2 |
| NAL11 | NACHT, LRR and PYD domains-containing protein 11 | 32.5 | 1 | – | – | – | 8.0 |
| SRCA | Sarcalumenin | 28.0 | 1 | 0.9 | 0.1 | 0.0 | 16.5 |
| ZCH11 | Zinc finger CCHC domain-containing protein 11 | 29.1 | 2 | – | 0.8 | – | 43.6 |
| [TLRs] | |||||||
| SIAS | Sialic acid synthase | 48.1 | 2 | 3.3 | 1.2 | 1.8 | 1.1 |
| TLR1 | Toll-like receptor 1 | 26.5 | 1 | – | 0.8 | – | – |
| TLR3 | Toll-like receptor 3 | 25.1 | 1 | – | 0.8 | – | – |
| TLR4 | Toll-like receptor 4 | 24.7 | 1 | 3.9 | – | 0.1 | – |
| WDR34 | WD repeat-containing protein 34 | 20.4 | 1 | – | 38.3 | – | – |
| CNPY4 | Protein canopy homolog 4 | 51.9 | 1 | – | – | 52.9 | 3.7 |
| CD14 | Monocyte differentiation antigen CD14 | 22.2 | 1 | – | – | – | 35.7 |
| ARD1 | GTP-binding protein ARD-1 | 75.3 | 2 | 1.2 | 1.1 | 0.9 | 2.8 |
| [NF-κB] | |||||||
| FGD2 | FYVE, RhoGEF and PH domain-containing protein 2 | 22.9 | 1 | 101.4 | – | – | 1.1 |
| NLRX1 | NLR family member X1 | 28.5 | 3 | 24.8 | 0.0 | 0.7 | 1.0 |
| COMD5 | COMM domain-containing protein 5 | 38.5 | 1 | – | 3.4 | – | – |
| HBZ | HTLV-1 basic zipper factor | 33.3 | 1 | – | 4.9 | – | 1.6 |
| JIP3 | C-jun-amino-terminal kinase-interacting protein 3 | 31.1 | 2 | 0.0 | 2.0 | 0.9 | 0.9 |
| JIP4 | C-jun-amino-terminal kinase-interacting protein 4 | 39.1 | 2 | 1.1 | 2.0 | – | 2.8 |
| UB2R2 | Ubiquitin-conjugating enzyme E2 R2 | 31.3 | 1 | – | ∞ | – | 0.0 |
| IKBL2 | NF-kappa-B inhibitor-like protein 2 | 27.5 | 1 | – | – | 8.1 | – |
| FER | Proto-oncogene tyrosine-protein kinase FER | 23.8 | 1 | – | – | 3.4 | – |
| LYRIC | Protein LYRIC | 32.0 | 1 | 0.5 | 1.2 | 3.3 | – |
| NFKB2 | Nuclear factor NF-kappa-B p100 subunit | 16.6 | 1 | – | – | 130.9 | – |
| SPSY | Spermine synthase | 95.5 | 4 | 1.0 | 0.5 | 2.9 | 0.6 |
| TNIP1 | TNFAIP3-interacting protein 1 | 37.7 | 2 | – | – | ∞ | ∞ |
| TRA2B | Transformer-2 protein homolog beta | 127.8 | 3 | 1.2 | 0.8 | 2.1 | 1.6 |
| PAIRB | Plasminogen activator inhibitor 1 RNA-binding protein | 142.7 | 5 | 0.9 | 0.4 | 1.3 | 2.1 |
| NCOA3 | Nuclear receptor coactivator 3 | 31.0 | 2 | – | 1.3 | 1.4 | ∞ |
| NLRC3 | Protein NLRC3 | 29.8 | 2 | – | 1.0 | – | 19.9 |
| NLRC5 | Protein NLRC5 | 38.8 | 3 | 0.8 | 0.7 | 0.6 | 2.1 |
| [Other] | |||||||
| IFIT3 | Interferon-induced protein with tetratricopeptide repeats 3 | 49.5 | 4 | 42.4 | 2.6 | 21.2 | – |
| M4K2 | Mitogen-activated protein kinase kinase kinase kinase 2 | 19.1 | 1 | 56.5 | – | – | – |
| NF2IP | NFATC2-interacting protein | 24.0 | 1 | 5.4 | – | – | 0.0 |
| PO210 | Nuclear pore membrane glycoprotein 210 | 25.3 | 1 | ∞ | 0.1 | – | – |
| PSME1 | Proteasome activator complex subunit 1 | 119.6 | 7 | 2.8 | 1.2 | 2.1 | 2.7 |
| SIN3A | Paired amphipathic helix protein Sin3a | 30.8 | 1 | ∞ | – | – | – |
| SODM | Superoxide dismutase [Mn], mitochondrial | 301.4 | 15 | 2.7 | 14.1 | 5.7 | 9.6 |
| TRRAP | Transformation/transcription domain-associated protein | 25.3 | 1 | ∞ | – | – | – |
| ZBT32 | Zinc finger and BTB domain-containing protein 32 | 25.6 | 1 | 44.6 | – | – | – |
| IFIT1 | Interferon-induced protein with tetratricopeptide repeats 1 | 43.7 | 1 | – | 20.0 | 57.4 | – |
| IKZF3 | Zinc finger protein Aiolos | 26.9 | 1 | – | 21.8 | – | – |
| ITLN2 | Intelectin-2 | 29.4 | 1 | – | 3.0 | 0.4 | – |
| M3K7 | Mitogen-activated protein kinase kinase kinase 7 | 27.3 | 1 | – | 9.1 | – | – |
| NFAC1 | Nuclear factor of activated T-cells, cytoplasmic 1 | 25.4 | 1 | – | 25.6 | – | – |
| PAWR | PRKC apoptosis WT1 regulator protein | 61.3 | 2 | – | 2.3 | 1.6 | 1.2 |
| SEM3B | Semaphorin-3B | 26.3 | 1 | – | 3.1 | – | – |
| TACT | T-cell surface protein tactile | 38.0 | 1 | – | 98.4 | – | – |
| TNAP2 | Tumor necrosis factor, alpha-induced protein 2 | 21.1 | 1 | 1.9 | 3.5 | – | – |
| TRI56 | Tripartite motif-containing protein 56 | 33.1 | 1 | – | 3.7 | – | – |
| ZBT43 | Zinc finger and BTB domain-containing protein 43 | 30.9 | 1 | – | 6.1 | – | – |
| HLAG | HLA class I histocompatibility antigen, alpha chain G | 51.2 | 1 | – | 1.1 | 8.4 | 2.6 |
| LIRB2 | Leukocyte immunoglobulin-like receptor subfamily B member 2 | 33.6 | 1 | – | – | 3.9 | – |
| NFAC3 | Nuclear factor of activated T-cells, cytoplasmic 3 | 22.4 | 1 | – | – | 19.6 | – |
| REG3G | Regenerating islet-derived protein 3 gamma | 34.8 | 1 | – | 0.8 | 93.3 | – |
| TBG2 | Tubulin gamma-2 chain | 61.7 | 1 | 1.0 | 1.1 | 26.3 | 89.3 |
| MABP1 | Mitogen-activated protein kinase-binding protein 1 | 39.3 | 1 | – | – | – | 14.3 |
Over 2-fold changes in expression levels are displayed in shadowed boxes.
Abbreviated list of ion homeostasis proteins induced in hMSCs by endotoxin.
| Protein ID | Peptide count | Expression ratio [LPS(+)/control] | |||||
|---|---|---|---|---|---|---|---|
| Code | Name | Score | Day 1 | Day 2 | Day 3 | Day 4 | |
| AT1B3 | Sodium/potassium-transporting ATPase subunit beta-3 | 40.2 | 2 | 4.7 | 2.6 | 0.8 | 1.3 |
| DPP6 | Dipeptidyl aminopeptidase-like protein 6 | 30.9 | 2 | 2.2 | 0.0 | – | – |
| GP143 | G-protein coupled receptor 143 | 34.4 | 1 | 4.5 | – | – | – |
| KCAB3 | Voltage-gated potassium channel subunit beta-3 | 24.0 | 1 | 9.8 | – | – | – |
| KCNA7 | Potassium voltage-gated channel subfamily A member 7 | 43.5 | 1 | 25.1 | 1.0 | 1.2 | 1.3 |
| KCNC2 | Potassium voltage-gated channel subfamily C member 2 | 25.2 | 1 | 6.8 | 0.9 | 2.6 | 1.4 |
| NALCN | Sodium leak channel non-selective protein | 39.8 | 1 | ∞ | 119.3 | – | 0.0 |
| SCLT1 | Sodium channel and clathrin linker 1 | 32.2 | 1 | ∞ | – | – | – |
| SCN1A | Sodium channel protein type 1 subunit alpha | 26.8 | 1 | ∞ | – | ∞ | – |
| SCN2A | Sodium channel protein type 2 subunit alpha | 25.3 | 1 | ∞ | – | ∞ | – |
| SCN3A | Sodium channel protein type 3 subunit alpha | 26.9 | 2 | ∞ | – | 68.4 | – |
| SCN3B | Sodium channel subunit beta-3 | 28.5 | 1 | 24.8 | 0.1 | 0.7 | 1.2 |
| SCN4A | Sodium channel protein type 4 subunit alpha | 25.3 | 1 | ∞ | 1.4 | ∞ | – |
| SCN5A | Sodium channel protein type 5 subunit alpha | 28.0 | 1 | ∞ | 1.2 | ∞ | – |
| SCN8A | Sodium channel protein type 8 subunit alpha | 25.3 | 1 | ∞ | – | ∞ | – |
| SCN9A | Sodium channel protein type 9 subunit alpha | 25.9 | 2 | ∞ | – | ∞ | – |
| SCNAA | Sodium channel protein type 10 subunit alpha | 25.6 | 2 | ∞ | 0.5 | ∞ | – |
| SCNBA | Sodium channel protein type 11 subunit alpha | 33.4 | 2 | 50.6 | 0.1 | 2.3 | 1.2 |
| SCNNG | Amiloride-sensitive sodium channel subunit gamma | 25.7 | 2 | 416.5 | 0.0 | 1.8 | – |
| SL9A4 | Sodium/hydrogen exchanger 4 | 27.6 | 1 | 67.8 | – | – | – |
| UNC79 | Protein unc-79 homolog | 26.4 | 1 | ∞ | – | – | – |
| WEE2 | Wee1-like protein kinase 2 | 35.8 | 1 | 2.9 | – | – | – |
| AT2C1 | Calcium-transporting ATPase type 2C member 1 | 32.5 | 2 | – | ∞ | 20.5 | – |
| MX1 | Interferon-induced GTP-binding protein Mx1 | 90.9 | 7 | 1.0 | 8.6 | – | – |
| RYR3 | Ryanodine receptor 3 | 25.1 | 1 | 1.2 | 96.3 | – | – |
| S39AD | Zinc transporter ZIP13 | 33.6 | 1 | – | 33.1 | – | – |
| WNK3 | Serine/threonine-protein kinase WNK3 | 44.3 | 2 | – | 32.4 | 0.2 | – |
| ACOC | Cytoplasmic aconitate hydratase | 241.2 | 13 | 1.0 | 1.7 | 4.0 | 2.4 |
| AT2B1 | Plasma membrane calcium-transporting ATPase 1 | 114.1 | 2 | 1.1 | 1.0 | 73.6 | 0.5 |
| AT2B3 | Plasma membrane calcium-transporting ATPase 3 | 92.8 | 1 | 1.1 | 1.0 | 73.6 | 0.9 |
| AT2B4 | Plasma membrane calcium-transporting ATPase 4 | 118.8 | 5 | 0.8 | 1.0 | 3.2 | 1.0 |
| CACB3 | Voltage-dependent L-type calcium channel subunit beta-3 | 26.0 | 2 | – | 0.1 | 247.1 | – |
| DYSF | Dysferlin | 40.2 | 2 | 1.8 | 1.0 | 2.9 | 1.4 |
| TRPC1 | Short transient receptor potential channel 1 | 29.2 | 1 | – | – | 103.7 | – |
| TRPM5 | Transient receptor potential cation channel subfamily M member 5 | 31.0 | 1 | – | 0.7 | ∞ | 1.3 |
| CA2D2 | Voltage-dependent calcium channel subunit alpha-2/delta-2 | 31.3 | 1 | – | – | – | 2.6 |
| CAC1D | Voltage-dependent L-type calcium channel subunit alpha-1D | 35.2 | 1 | 1.4 | 0.0 | – | 79.7 |
| SCN2B | Sodium channel subunit beta-2 | 28.0 | 1 | 0.9 | 0.1 | 0.0 | 16.5 |
Over 2-fold changes in expression levels are displayed in shadowed boxes.
Fig. 4List of protein functions. Molecular function (a), cellular components (b), and biological processes (c).