Literature DB >> 30271230

Generation of Ribozymes by Rolling Circle Transcription of Promoterless Single-Stranded DNA Circles in Mammalian Cells.

Attila A Seyhan1.   

Abstract

Self-processing hairpin ribozymes have been synthesized from promoterless single-stranded DNA circles (73 nt) within mammalian cells. Following lipid-mediated transient transfection, DNA circles were efficiently internalized by mouse L cells (OST7-1) that stably express T7 RNA polymerase confining it to the cytoplasm. Cellular uptake of circular DNA templates and intracellular accumulation of ribozyme RNA transcripts from these DNA circles were progressive, both peaking at 24 h after transfection. Intracellular transcription generated RNA concatemers accumulating to a level of ~100 copies per cell. Transcription appears to be independent of specific promoter sequences but depends on T7 RNA polymerase. The data presented here may support the hypothesis that single stranded bubble regions within duplex DNA can serve as de novo initiation sites for RNA transcription not only in vitro but also in the cytoplasm of mammalian cells. These results may provide a model for the rolling circle transcription of small circular nucleic acids in mammalian cells.

Entities:  

Keywords:  RNA polymerase II; T7 RNA polymerase; circular DNA; multimeric RNAs; rTth DNA polymerase; ribozyme catalysis; rolling circle transcription

Year:  2006        PMID: 30271230      PMCID: PMC6159908     

Source DB:  PubMed          Journal:  Turk Biyokim Derg        ISSN: 1303-829X


  34 in total

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Authors:  T Ohmichi; E T Kool
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

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Journal:  J Mol Biol       Date:  1999-03-26       Impact factor: 5.469

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Journal:  Biochemistry       Date:  1991-08-06       Impact factor: 3.162

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Journal:  Nucleic Acids Symp Ser       Date:  1995

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Journal:  Yi Chuan Xue Bao       Date:  1996

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Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

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Journal:  J Cell Sci Suppl       Date:  1987

8.  A predictable modification of enzyme specificity. Selective alteration of DNA bases by metal ions to promote cleavage specificity by deoxyribonuclease.

Authors:  P Clark; G L Eichhorn
Journal:  Biochemistry       Date:  1974-12-03       Impact factor: 3.162

9.  Recent developments in methods for RNA sequencing using in vitro 32P-labeling.

Authors:  U L Rajbhandary
Journal:  Fed Proc       Date:  1980-08

10.  Catalytically active geometry in the reversible circularization of 'mini-monomer' RNAs derived from the complementary strand of tobacco ringspot virus satellite RNA.

Authors:  P A Feldstein; G Bruening
Journal:  Nucleic Acids Res       Date:  1993-04-25       Impact factor: 16.971

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