| Literature DB >> 30271127 |
Xin Yi Wong1, Catharina Gm Groothuis-Oudshoorn2, Chuen Seng Tan3, Janine A van Til2, Mikael Hartman3,4, Kok Joon Chong5, Maarten J IJzerman2,6,7, Hwee-Lin Wee1,3.
Abstract
BACKGROUND: Single-nucleotide polymorphism (SNP) gene test is a potential tool for improving the accuracy of breast cancer risk prediction. We seek to measure women's preferences and marginal willingness-to-pay (mWTP) for this new technology.Entities:
Keywords: discrete choice experiment; gene testing; personalized breast cancer screening; precision medicine; predicted uptake; single-nucleotide polymorphisms; willingness-to-pay; women’s preferences
Year: 2018 PMID: 30271127 PMCID: PMC6154732 DOI: 10.2147/PPA.S171348
Source DB: PubMed Journal: Patient Prefer Adherence ISSN: 1177-889X Impact factor: 2.711
Attributes and levels of SNPs gene testing
| Attribute | Levels |
|---|---|
| 1 Sample type | 1 Buccal swab |
| 2 Dried blood spot | |
| 2 Person conducting pretest discussion | 1 Specialist doctor |
| 2 Nurse educator trained in genetic counseling | |
| 3 Non-specialist doctor | |
| 3 Test location | 1 Private family clinic |
| 2 Hospital | |
| 3 Public primary-care clinic | |
| 4 Out-of-pocket cost | 1 S$50 (US$38) |
| 2 S$175 (US$134) | |
| 3 S$300 (US$229) |
Note:
US$1 is approximately S$1.31.
Abbreviations: SNP, single-nucleotide polymorphism; S$, Singapore dollars.
Figure 1Example of a random choice task.
Abbreviations: SNP, single-nucleotide polymorphism; S$, Singapore dollars.
Self-reported respondent characteristics (n=300)
| Total number | Chinese | Malay | Indian | ||
|---|---|---|---|---|---|
| Total number of respondents | 300 (100.0) | 100 (33.3) | 100 (33.3) | 100 (33.3) | |
| Age in years (mean, SD) | 52.6 (7.6) | 53.2 (8.0) | 52.8 (7.2) | 51.9 (7.5) | 0.583 |
| Age in years (median, IQR) | 52 (13.0) | 54 (14.0) | 52 (11.0) | 50.5 (11.3) | |
| Marital status | 0.001 | ||||
| Married with children | 246 (82.0) | 72 (72.0) | 86 (86.0) | 88 (88.0) | |
| Married without children | 14 (4.7) | 8 (8.0) | 2 (2.0) | 4 (4.0) | |
| Single | 23 (7.7) | 16 (16.0) | 5 (5.0) | 2 (2.0) | |
| Divorced or separated | 11 (3.7) | 4 (4.0) | 3 (3.0) | 4 (4.0) | |
| Widowed | 6 (2.0) | – | 4 (4.0) | 2 (2.0) | |
| Highest education completed | <0.001 | ||||
| Elementary school and below | 48 (16.0) | 8 (8.0) | 23 (23.0) | 17 (17.0) | |
| High school sophomore or technical school | 178 (59.3) | 47 (47.0) | 66 (66.0) | 65 (65.0) | |
| High school senior | 46 (15.3) | 29 (29.0) | 10 (10.0) | 7 (7.0) | |
| College and above | 28 (9.3) | 16 (16.0) | 1 (1.0) | 11 (11.0) | |
| Housing type | 0.007 | ||||
| Small public housing | 22 (7.3) | 1 (1.0) | 10 (10.0) | 11 (11.0) | |
| Medium public housing | 188 (62.7) | 62 (62.0) | 68 (68.0) | 58 (58.0) | |
| Large public housing | 82 (27.3) | 33 (33.0) | 19 (19.0) | 30 (30.0) | |
| Private apartment or landed property | 8 (2.7) | 4 (4.0) | 3 (3.0) | 1 (1.0) | |
| Monthly household income | 0.031 | ||||
| Below S$3,000 | 88 (29.3) | 25 (25.0) | 36 (36.0) | 27 (27.0) | |
| S$3,000–S$6,999 | 163 (54.3) | 51 (51.0) | 49 (49.0) | 63 (63.0) | |
| S$7,000 and above | 49 (16.3) | 24 (24.0) | 15 (15.0) | 10 (10.0) | |
| Occupation | <0.001 | ||||
| Self-employed/PME | 50 (16.7) | 28 (28.0) | 9 (9.0) | 13 (13.0) | |
| Other white-collar | 73 (24.3) | 32 (32.0) | 15 (15.0) | 26 (26.0) | |
| Blue-collar | 40 (13.3) | 5 (5.0) | 16 (16.0) | 19 (19.0) | |
| Housewife | 121 (40.3) | 28 (28.0) | 53 (53.0) | 40 (40.0) | |
| Others, including retiree | 16 (5.3) | 7 (7.0) | 7 (7.0) | 2 (2.0) | |
| Had a first-degree relative (biological mother, sister, or daughter) diagnosed with breast cancer before | 13 (4.3) | 7 (7.0) | 1 (1.0) | 5 (5.0) | 0.092 |
| Attended mammogram screening before | 185 (61.7) | 77 (77.0) | 50 (50.0) | 58 (58.0) | <0.001 |
| Time since last mammogram screening | 0.233 | ||||
| <1 year | 47 (15.7) | 22 (22.0) | 9 (9.0) | 16 (16.0) | |
| 1–2 years | 57 (19.0) | 24 (24.0) | 13 (13.0) | 20 (20.0) | |
| 2–3 years | 29 (9.7) | 8 (8.0) | 9 (9.0) | 12 (12.0) | |
| 3–5 years | 13 (4.3) | 4 (4.0) | 6 (6.0) | 3 (3.0) | |
| >5 years ago | 39 (13.0) | 19 (19.0) | 13 (13.0) | 7 (7.0) |
Note: One-way ANOVA was used to test for significant differences in age between groups while chi-squared test was used to test for significant differences in categorical variables between groups.
Abbreviations: IQR, interquartile range; PME, professional, managerial, or executive; S$, Singapore dollars.
Respondent preferences (measured in PWUs) for attribute levels of SNP gene testing and interactions between respondent characteristics and attribute levels
| Attribute level | Mean PWU (95% CI) | SD of mean PWU (95% CI) | |
|---|---|---|---|
| Sample type | |||
| Buccal swab | 0.122 (0.002, 0.242) | 0.046 | 0.290 (0.099, 0.481) |
| Dried blood spot | −0.122 (−0.242, −0.002) | 0.046 | – |
| Person conducting pretest discussion | |||
| Specialist doctor | 1.032 (0.831, 1.233) | <0.001 | 0.332 (0.099, 0.565) |
| Nurse educator | −0.443 (−0.620, −0.265) | <0.001 | – |
| Non-specialist doctor | −0.590 (−0.774, −0.406) | <0.001 | −0.336 (−0.553, −0.118) |
| Test location | |||
| Private family clinic | 0.158 (−0.019, 0.335) | 0.080 | 0.273 (−0.019, 0.565) |
| Hospital | −0.025 (−0.203, 0.152) | 0.780 | – |
| Public primary-care clinic | −0.133 (−0.304, 0.039) | 0.130 | −0.036 (−0.338, 0.266) |
| Out-of-pocket cost, per S$100 | −4.140 (−4.621, −3.660) | <0.001 | NA because coded as fixed |
| Alternative-specific constants | |||
| Choose left | 2.843 (2.532, 3.153) | <0.001 | −0.318 (−0.545, −0.091) |
| Choose none | −5.437 (−6.113, −4.762) | <0.001 | 2.645 (2.183, 3.106) |
| Significant interactions in the main effects + interactions model | |||
| Age 60–69 × choose left | −0.384 (−0.623, −0.145) | 0.002 | −0.303 (−0.596, −0.010) |
| Income S$3,000–S$6,999 × choose left | −0.251 (−0.453, −0.050) | 0.015 | 0.573 (0.344, 0.803) |
| Income >S$7,000 × cost per S$100 | 0.586 (0.178, 0.995) | 0.005 | 1.382 (0.987, 1.777) |
| High school senior education × cost per S$100 | 0.917 (0.469, 1.366) | <0.001 | −0.181 (−0.799, 0.438) |
| Blue-collar occupation × cost per S$100 | −0.694 (−1.384, −0.004) | 0.049 | 0.846 (0.457, 1.236) |
Notes: Other variables in the model include (not significant): Indian ethnicity × cost per S$100, age 50–59 × choose left, age 50–59 × cost per S$100, age 60–69 × cost per S$100, white-collar occupation × cost per S$100, and other occupation × cost per S$100. Reference levels for respondent characteristics are: age 40–49 years, household income
All parameter estimates were derived from the mixed logit model with main effects plus interactions estimated in the preference space, as it was a better fit for the data as compared to main effects model (likelihood ratio test, P<0.001).
The sign of the estimated standard deviations is irrelevant and should be interpreted as being positive. The likelihood ratio test for the joint significance of all standard deviations has a P-value of <0.001, implying that the null hypothesis that all standard deviations are equal to zero is rejected, that is, there is significant preference heterogeneity.
Signifies the reference level of each attribute. Parameter estimates of reference levels were obtained using the lincom command in Stata.
P<0.05.
P<0.01.
P<0.001.
Abbreviations: NA, not applicable; PWU, part-worth utility; SNP, single-nucleotide polymorphism; S$, Singapore dollars.
Figure 2Probability density and cumulative density functions of mWTP in the overall study population.
Abbreviation: mWTP, marginal willingness-to-pay.
Overall respondent mWTP for attribute levels of SNP gene testing (n=300)
| Attribute level | Mean mWTP, | SD of mean mWTP, | |
|---|---|---|---|
| Sample type | |||
| Buccal swab | 2.65 (0.79, 4.51) | 0.005 | 1.48 (−0.69, 3.65) |
| Dried blood spot | – | – | – |
| Person conducting pre-test discussion | |||
| Specialist doctor | 28.39 (25.35, 31.42) | ,0.001 | 10.87 (7.93, 13.78) |
| Nurse educator | – | – | – |
| Non-specialist doctor | −16.53 (−19.18, −13.88) | ,0.001 | −2.91 (−5.05, −0.77) |
| Test location | |||
| Private family clinic | 7.70 (4.22, 11.17) | ,0.001 | 15.39 (11.94, 18.84) |
| Hospital | – | – | – |
| Public primary-care clinic | −5.86 (−8.94, −2.79) | ,0.001 | −1.43 (−5.43, 2.57) |
Notes:
mWTP figures were obtained from the same mixed logit model in Table 3 but estimated in WTP space (main effects plus interactions).
The sign of the estimated standard deviations is irrelevant and should be interpreted as being positive. The likelihood ratio test for the joint significance of all standard deviations has a P-value of <0.001, implying that the null hypothesis that all standard deviations are equal to zero is rejected, that is, there is significant preference heterogeneity.
Signifies the reference level of each attribute.
(P<0.01),
(P<0.001).
Abbreviations: mWTP, marginal willingness-to-pay; SNP, single-nucleotide polymorphism; S$, Singapore dollars.
Figure 3Probability density and cumulative density functions of mWTP across three ethnic groups.
Abbreviation: mWTP, marginal willingness-to-pay.
Summary statistics of respondent mWTP estimates by ethnicity
| Attribute level | Statistic | mWTP | ||||
|---|---|---|---|---|---|---|
| Overall | Chinese | Malay | Indian | |||
| Buccal swab (reference level: dried blood spot) | Q1 | 2.32 | 2.21 | 2.26 | 2.45 | 0.306 |
| Median | 2.61 | 2.54 | 2.63 | 2.66 | ||
| Q3 | 2.88 | 2.81 | 2.90 | 2.90 | ||
| Mean | 2.58 | 2.51 | 2.57 | 2.66 | ||
| SD | 0.71 | 0.72 | 0.75 | 0.66 | ||
| Specialist doctor (reference level: nurse educator) | Q1 | 25.68 | 25.93 | 24.76 | 25.64 | 0.930 |
| Median | 28.40 | 28.71 | 28.17 | 27.99 | ||
| Q3 | 31.23 | 31.76 | 31.30 | 30.63 | ||
| Mean | 28.09 | 28.26 | 28.09 | 27.91 | ||
| SD | 6.47 | 7.50 | 5.95 | 5.90 | ||
| Non-specialist doctor (reference level: nurse educator) | Q1 | −17.12 | −17.07 | −17.20 | −17.10 | 0.291 |
| Median | −16.50 | −16.60 | −16.47 | −16.48 | ||
| Q3 | −15.73 | −15.61 | −15.86 | −15.74 | ||
| Mean | −16.44 | −16.31 | −16.62 | −16.40 | ||
| SD | 1.47 | 1.70 | 1.29 | 1.39 | ||
| Private family clinic (reference level: hospital) | Q1 | 3.29 | 4.42 | 2.59 | 3.25 | 0.174 |
| Median | 7.73 | 8.31 | 6.99 | 7.63 | ||
| Q3 | 11.95 | 12.92 | 10.54 | 11.64 | ||
| Mean | 7.71 | 8.91 | 6.72 | 7.51 | ||
| SD | 8.39 | 8.09 | 8.13 | 8.86 | ||
| Public primary-care clinic (reference level: hospital) | Q1 | −6.16 | −6.27 | −6.14 | −6.10 | 0.915 |
| Median | −5.82 | −5.85 | −5.82 | −5.78 | ||
| Q3 | −5.52 | −5.60 | −5.46 | −5.50 | ||
| Mean | −5.85 | −5.86 | −5.82 | −5.85 | ||
| SD | 0.66 | 0.80 | 0.60 | 0.54 | ||
Notes: One-way ANOVA was used to test for significant differences in mWTP estimates between ethnic groups.
mWTP figures were derived from the individual-level parameters obtained using the Stata post-estimation command mixlbeta. The results are slightly different from that in Table 4.
Abbreviations: mWTP, marginal willingness-to-pay; Q1, first quartile; Q3, third quartile; S$, Singapore dollars.
Predicted test uptake rates in various scenarios
| Attribute levels in each scenario | Realistic base case | Feasible alternative | Cheaper alternative | Pricier alternative | Most preferred alternative |
|---|---|---|---|---|---|
| Sample type | Buccal swab | Buccal swab | Buccal swab | Buccal swab | Buccal swab |
| Person conducting pretest discussion | Specialist doctor | Nurse educator | Specialist doctor | Specialist doctor | Specialist doctor |
| Test location | Hospital | Hospital | Hospital | Hospital | Private family clinic |
| Cost | S$175 | S$50 | S$50 | S$300 | S$50 |
| Test uptake rate (%) | |||||
| All (n=300) | 3.7 | 60.5 | 87.0 | 0.0 | 88.9 |
Abbreviation: S$, Singapore dollars.
Comparison between PWUs of attribute levels of SNP gene testing including and excluding alternative-specific constant “Choose left” (main effects only)
| Attribute level | Mean PWU (95% CI)
| |
|---|---|---|
| Including “Choose left” | Excluding “Choose left” | |
| Buccal swab | 0.087 (−0.017, 0.190) | 0.070 (−0.014, 0.154) |
| Dried blood spot | −0.087 (−0.190, 0.017) | −0.070 (−0.154, 0.014) |
| Specialist doctor | 0.776 (0.617, 0.936) | 0.522 (0.398, 0.646) |
| Nurse educator | −0.327 (−0.474, −0.180) | −0.251 (−0.377, −0.125) |
| Non-specialist doctor | −0.449 (−0.602, −0.297) | −0.271 (−0.387, −0.156) |
| Private family clinic | 0.091 (−0.056, 0.238) | 0.084 (−0.037, 0.205) |
| Hospital | 0.029 (−0.124, 0.183) | −0.074 (−0.205, 0.057) |
| Public primary-care clinic | −0.120 (−0.271, 0.031) | −0.010 (−0.133, 0.112) |
| Out-of-pocket cost, per S$100 | −2.848 (−3.082, −2.613) | −1.840 (−1.972, −1.709) |
| Alternative-specific constant(s) | ||
| Choose left | 2.092 (1.887, 2.296) | NA |
| Choose none | −3.801 (−4.163, −3.439) | −1.770 (−1.917, −1.623) |
Notes: Negative PWU represents disutility. Grand mean has an expected utility of zero.
Signifies the reference level of each attribute. Parameter estimates were obtained using the lincom command in Stata.
(P<0.001).
Abbreviations: NA, not applicable; PWU, part-worth utility; SNP, single-nucleotide polymorphism.