Literature DB >> 30269981

Emerging Roles of Ubiquitin-like Proteins in Pre-mRNA Splicing.

Sittinan Chanarat1, Shravan Kumar Mishra2.   

Abstract

Ubiquitin-like proteins (UBLs) belong to the protein family whose members share a globular beta-grasp fold structure. The archetypal member, ubiquitin, is known for its function in proteasome-mediated protein degradation. UBLs have been shown to play several crucial roles besides protein turnover, including DNA damage response, cell cycle control, cellular signaling, protein trafficking, and innate immunity activation. In the past few years, accumulating evidence illustrates that four UBLs, namely, ubiquitin, SUMO, Hub1, and Sde2, are involved in eukaryotic pre-mRNA splicing. They modify the spliceosomes and promote splicing by adding new surfaces for intermolecular interactions, thereby refining the outcome of gene expression. In this review article, we highlight recent discoveries with an emphasis on the emerging roles of UBLs in splicing regulation.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Hub1; SUMO; Sde2; splicing regulation; ubiquitin; ubiquitin-like protein family

Mesh:

Substances:

Year:  2018        PMID: 30269981     DOI: 10.1016/j.tibs.2018.09.001

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  11 in total

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Authors:  Shiping Tang
Journal:  J Mol Evol       Date:  2021-06-25       Impact factor: 2.395

Review 2.  Ubiquitination and Ubiquitin-Like Modifications as Mediators of Alternative Pre-mRNA Splicing in Arabidopsis thaliana.

Authors:  Wei Lan; Yuhao Qiu; Yun Xu; Yalin Liu; Ying Miao
Journal:  Front Plant Sci       Date:  2022-05-12       Impact factor: 6.627

3.  A negative feedback mechanism links UBC gene expression to ubiquitin levels by affecting RNA splicing rather than transcription.

Authors:  Marzia Bianchi; Rita Crinelli; Elisa Giacomini; Elisa Carloni; Lucia Radici; Emanuele-Salvatore Scarpa; Filippo Tasini; Mauro Magnani
Journal:  Sci Rep       Date:  2019-12-06       Impact factor: 4.379

4.  Prognostic Value and Potential Regulatory Mechanism of Alternative Splicing in Geriatric Breast Cancer.

Authors:  Xin Li; Yaxuan Wang; Bingjie Li; Wang Ma
Journal:  Genes (Basel)       Date:  2020-02-16       Impact factor: 4.096

5.  Adenovirus-mediated ubiquitination alters protein-RNA binding and aids viral RNA processing.

Authors:  Christin Herrmann; Joseph M Dybas; Jennifer C Liddle; Alexander M Price; Katharina E Hayer; Richard Lauman; Caitlin E Purman; Matthew Charman; Eui Tae Kim; Benjamin A Garcia; Matthew D Weitzman
Journal:  Nat Microbiol       Date:  2020-07-13       Impact factor: 17.745

6.  Broader roles of the ubiquitin-like protein Hub1 indicated by its yeast two-hybrid interactors.

Authors:  Amjadudheen Varikkapulakkal; Anuraag Ghosh; Shravan Kumar Mishra
Journal:  MicroPubl Biol       Date:  2022-01-25

Review 7.  Disorders of ubiquitylation: unchained inflammation.

Authors:  David B Beck; Achim Werner; Daniel L Kastner; Ivona Aksentijevich
Journal:  Nat Rev Rheumatol       Date:  2022-05-06       Impact factor: 32.286

8.  DDX39B interacts with the pattern recognition receptor pathway to inhibit NF-κB and sensitize to alkylating chemotherapy.

Authors:  Szymon J Szymura; Giovanna M Bernal; Longtao Wu; Zhongqin Zhang; Clayton D Crawley; David J Voce; Paige-Ashley Campbell; Diana E Ranoa; Ralph R Weichselbaum; Bakhtiar Yamini
Journal:  BMC Biol       Date:  2020-03-24       Impact factor: 7.431

9.  SF3B1 homeostasis is critical for survival and therapeutic response in T cell leukemia.

Authors:  Cuijuan Han; Alireza Khodadadi-Jamayran; Adam H Lorch; Qi Jin; Valentina Serafin; Ping Zhu; Yuliya Politanska; Limin Sun; Blanca T Gutierrez-Diaz; Marina V Pryzhkova; Hiam Abdala-Valencia; Elizabeth Thomas Bartom; Barbara Buldini; Giuseppe Basso; Sadanandan E Velu; Kavitha Sarma; Basil B Mattamana; Byoung-Kyu Cho; Rebecca C Obeng; Young Ah Goo; Philip W Jordan; Aristotelis Tsirigos; Yalu Zhou; Panagiotis Ntziachristos
Journal:  Sci Adv       Date:  2022-01-21       Impact factor: 14.957

10.  SDE2 is an essential gene required for ribosome biogenesis and the regulation of alternative splicing.

Authors:  Jess Floro; Anqi Dai; Abigail Metzger; Alexandra Mora-Martin; Neil J Ganem; Daniel Cifuentes; Ching-Shyi Wu; Jasbir Dalal; Shawn M Lyons; Adam Labadorf; Rachel L Flynn
Journal:  Nucleic Acids Res       Date:  2021-09-20       Impact factor: 16.971

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