Literature DB >> 30269289

Trimetaphosphate Activates Prebiotic Peptide Synthesis across a Wide Range of Temperature and pH.

Izabela Sibilska1,2, Yu Feng3, Lingjun Li3,4, John Yin5,6.   

Abstract

The biochemical activation of amino acids by adenosine triphosphate (ATP) drives the synthesis of proteins that are essential for all life. On the early Earth, before the emergence of cellular life, the chemical condensation of amino acids to form prebiotic peptides or proteins may have been activated by inorganic polyphosphates, such as tri metaphosphate (TP). Plausible volcanic and other potential sources of TP are known, and TP readily activates amino acids for peptide synthesis. But de novo peptide synthesis also depends on pH, temperature, and processes of solvent drying, which together define a varied range of potential activating conditions. Although we cannot replay the tape of life on Earth, we can examine how activator, temperature, acidity and other conditions may have collectively shaped its prebiotic evolution. Here, reactions of two simple amino acids, glycine and alanine, were tested, with or without TP, over a wide range of temperature (0-100 °C) and acidity (pH 1-12), while open to the atmosphere. After 24 h, products were analyzed by HPLC and mass spectrometry. In the absence of TP, glycine and alanine readily formed peptides under harsh near-boiling temperatures, extremes of pH, and within dry solid residues. In the presence of TP, however, peptides arose over a much wider range of conditions, including ambient temperature, neutral pH, and in water. These results show how polyphosphates such as TP may have enabled the transition of peptide synthesis from harsh to mild early Earth environments, setting the stage for the emergence of more complex prebiotic chemistries.

Entities:  

Keywords:  Alanine; Drying-induced condensation; Glycine; Prebiotic; Trimetaphosphate; de novo peptides

Mesh:

Substances:

Year:  2018        PMID: 30269289      PMCID: PMC8092023          DOI: 10.1007/s11084-018-9564-7

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  37 in total

Review 1.  Peptides and the origin of life.

Authors:  B M Rode
Journal:  Peptides       Date:  1999       Impact factor: 3.750

Review 2.  The ABC's (and XYZ's) of peptide sequencing.

Authors:  Hanno Steen; Matthias Mann
Journal:  Nat Rev Mol Cell Biol       Date:  2004-09       Impact factor: 94.444

3.  Prebiotic peptide-formation in the solid state. II. Reaction of glycine with adenosine 5'-triphosphate and P1,P2-diadenosine-pyrophosphate.

Authors:  H Sawai; R Lohrmann; L E Orgel
Journal:  J Mol Evol       Date:  1975-11-04       Impact factor: 2.395

4.  Synthesis of long prebiotic oligomers on mineral surfaces.

Authors:  J P Ferris; A R Hill; R Liu; L E Orgel
Journal:  Nature       Date:  1996-05-02       Impact factor: 49.962

5.  Prebiotic condensation reactions in an aqueous medium: a review of condensing agents.

Authors:  J Hulshof; C Ponnamperuma
Journal:  Orig Life       Date:  1976-08

6.  The catalytic effect of L- and D-histidine on alanine and lysine peptide formation.

Authors:  Daniel Fitz; Thomas Jakschitz; Bernd M Rode
Journal:  J Inorg Biochem       Date:  2008-07-29       Impact factor: 4.155

7.  Dipeptides and diketopiperazines in the Yamato-791198 and Murchison carbonaceous chondrites.

Authors:  Akira Shimoyama; Ryo Ogasawara
Journal:  Orig Life Evol Biosph       Date:  2002-04       Impact factor: 1.950

8.  Effects of Trimetaphosphate on Abiotic Formation and Hydrolysis of Peptides.

Authors:  Izabela K Sibilska; Bingming Chen; Lingjun Li; John Yin
Journal:  Life (Basel)       Date:  2017-11-30

Review 9.  A Chemist's Perspective on the Role of Phosphorus at the Origins of Life.

Authors:  Christian Fernández-García; Adam J Coggins; Matthew W Powner
Journal:  Life (Basel)       Date:  2017-07-13

Review 10.  Towards an evolutionary theory of the origin of life based on kinetics and thermodynamics.

Authors:  Robert Pascal; Addy Pross; John D Sutherland
Journal:  Open Biol       Date:  2013-11-06       Impact factor: 6.411

View more
  3 in total

1.  Toward Molecular Cooperation by De Novo Peptides.

Authors:  Izabela K Sibilska-Kaminski; John Yin
Journal:  Orig Life Evol Biosph       Date:  2021-02-10       Impact factor: 1.950

Review 2.  Prebiotic Chemistry: The Role of Trimetaphosphate in Prebiotic Chemical Evolution.

Authors:  Dingwei Gan; Jianxi Ying; Yufen Zhao
Journal:  Front Chem       Date:  2022-07-13       Impact factor: 5.545

3.  A Polymeric Composite Material (rGO/PANI) for Acid Blue 129 Adsorption.

Authors:  Tomasz Kukulski; Stanisław Wacławek; Daniele Silvestri; Kamil Krawczyk; Vinod V T Padil; Ryszard Fryczkowski; Jarosław Janicki; Miroslav Černík
Journal:  Polymers (Basel)       Date:  2020-05-03       Impact factor: 4.329

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.