Literature DB >> 3026504

Determination of relative spin concentration in some high-spin ferric proteins using E/D-distribution in electron paramagnetic resonance simulations.

A S Yang, B J Gaffney.   

Abstract

Lineshape simulations are presented for the multiple, overlapping X-band electron paramagnetic resonance (EPR) spectra in two non-heme, high-spin iron proteins: phenylalanine hydroxylase (PAH) and diferric transferrin. The aim of the calculations is to determine the fraction of iron contributing to each of the sites visible by EPR. The simulations are limited to the experimentally accessible transitions occurring at g-values greater than 1.7. In both PAH and transferrin, at least one of the iron sites is characterized by the ratio of zero-field splitting parameters, E/D, near 1/3 and a broad, asymmetric lineshape. A distribution in E/D-values is used in the simulations to account for this breadth and asymmetry. To test the E/D-distribution model, experimental X-band spectra of diferric transferrin at several salt concentrations are fit by simulation. In this test, first the low-field features arising from transitions between the lowest Kramers doublet levels are simulated using E/D-distributions for two sites. Second, parameters that provide a good fit for the lowest doublet transitions are shown also to fit the resonance near an effective g-value of 4.3 from the middle Kramers doublet transition. When applied to spectra of PAH in the resting state, the E/D-distribution approach accounts for the intensity of one of the two major species of iron. The other species is characterized by E/D = 0.032, and the spectrum of this portion of the resting enzyme may be simulated using a frequency-swept Gaussian lineshape. Spectra for the enzyme in an inhibitor-saturated state are also simulated. The simulations are consistent with previous biochemical studies that indicate that only the E/D = 0.032 form of iron participates in catalysis.

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Year:  1987        PMID: 3026504      PMCID: PMC1329863          DOI: 10.1016/S0006-3495(87)83311-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  9 in total

1.  Density of low-energy vibrational states in a protein solution.

Authors: 
Journal:  Phys Rev Lett       Date:  1985-04-22       Impact factor: 9.161

2.  Difference between the two iron-binding sites of transferrin.

Authors:  J V Princiotto; E J Zapolski
Journal:  Nature       Date:  1975-05-01       Impact factor: 49.962

Review 3.  The spin 3/2 state and quantum spin mixtures in haem proteins.

Authors:  M M Maltempo
Journal:  Q Rev Biophys       Date:  1976-05       Impact factor: 5.318

4.  Stoichiometric and site characteristics of the binding of iron to human transferrin.

Authors:  P Aisen; A Leibman; J Zweier
Journal:  J Biol Chem       Date:  1978-03-25       Impact factor: 5.157

5.  Electron paramagnetic resonance evidence for a distinction between the two iron-binding sites in transferrin and in conalbumin.

Authors:  E M Price; J F Gibson
Journal:  J Biol Chem       Date:  1972-12-25       Impact factor: 5.157

6.  Re-interpretation of the electron paramagnetic resonance spectra of transferrins.

Authors:  R Aasa
Journal:  Biochem Biophys Res Commun       Date:  1972-11-01       Impact factor: 3.575

7.  Zero-field splittings of iron complexes of transferrins.

Authors:  R A Pinkowitz; P Aisen
Journal:  J Biol Chem       Date:  1972-12-10       Impact factor: 5.157

8.  Characterization of phenylalanine hydroxylase.

Authors:  L M Bloom; S J Benkovic; B J Gaffney
Journal:  Biochemistry       Date:  1986-07-29       Impact factor: 3.162

9.  Reductive activation of phenylalanine hydroxylase and its effect on the redox state of the non-heme iron.

Authors:  D E Wallick; L M Bloom; B J Gaffney; S J Benkovic
Journal:  Biochemistry       Date:  1984-03-13       Impact factor: 3.162

  9 in total
  15 in total

1.  Potentially diagnostic electron paramagnetic resonance spectra elucidate the underlying mechanism of mitochondrial dysfunction in the deoxyguanosine kinase deficient rat model of a genetic mitochondrial DNA depletion syndrome.

Authors:  Brian Bennett; Daniel Helbling; Hui Meng; Jason Jarzembowski; Aron M Geurts; Marisa W Friederich; Johan L K Van Hove; Michael W Lawlor; David P Dimmock
Journal:  Free Radic Biol Med       Date:  2016-01-08       Impact factor: 7.376

2.  Solvent modulation of the structural heterogeneity in FeIII myoglobin samples: a low temperature EPR investigation.

Authors:  A R Bizzarri; S Cannistraro
Journal:  Eur Biophys J       Date:  1993       Impact factor: 1.733

3.  EPR of Mononuclear Non-Heme Iron Proteins.

Authors:  Betty J Gaffney
Journal:  Biol Magn Reson       Date:  2009-06-19

4.  Exploring the Fe(III) binding sites of human serum transferrin with EPR at 275 GHz.

Authors:  Guinevere Mathies; Peter Gast; N Dennis Chasteen; Ashley N Luck; Anne B Mason; Edgar J J Groenen
Journal:  J Biol Inorg Chem       Date:  2014-12-24       Impact factor: 3.358

5.  Electron Spin Relaxation Rates for High-Spin Fe(III) in Iron Transferrin Carbonate and Iron Transferrin Oxalate.

Authors:  B J Gaffney; G R Eaton; S S Eaton
Journal:  J Phys Chem B       Date:  1998-07-09       Impact factor: 2.991

6.  Influence of the freezing process upon fluoride binding to hemeproteins.

Authors:  A S Yang; A S Brill
Journal:  Biophys J       Date:  1991-05       Impact factor: 4.033

7.  Effect of the synergistic anion on electron paramagnetic resonance spectra of iron-transferrin anion complexes is consistent with bidentate binding of the anion.

Authors:  J Dubach; B J Gaffney; K More; G R Eaton; S S Eaton
Journal:  Biophys J       Date:  1991-05       Impact factor: 4.033

8.  Isolation and characterization of the iron-binding properties of a primitive monolobal transferrin from Ciona intestinalis.

Authors:  Ritika Uppal; K V Lakshmi; Ann M Valentine
Journal:  J Biol Inorg Chem       Date:  2008-04-18       Impact factor: 3.358

9.  Access of ligands to the ferric center in lipoxygenase-1.

Authors:  B J Gaffney; D V Mavrophilipos; K S Doctor
Journal:  Biophys J       Date:  1993-03       Impact factor: 4.033

Review 10.  EPR Spectroscopic Studies of Lipoxygenases.

Authors:  Betty J Gaffney
Journal:  Chem Asian J       Date:  2019-12-05
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