| Literature DB >> 30263138 |
U Partap1,2, E H Young1,2, P Allotey3,4, M S Sandhu1,2, D D Reidpath4,5.
Abstract
BACKGROUND: Integration of biomarker data with information on health and lifestyle provides a powerful tool to enhance the scientific value of health research. Existing health and demographic surveillance systems (HDSSs) present an opportunity to create novel biodata resources for this purpose, but data and biological sample collection often presents challenges. We outline some of the challenges in developing these resources and present the outcomes of a biomarker feasibility study embedded within the South East Asia Community Observatory (SEACO) HDSS.Entities:
Keywords: South East Asia; biological sample collection; feasibility studies; health and demographic surveillance
Year: 2018 PMID: 30263138 PMCID: PMC6152490 DOI: 10.1017/gheg.2018.13
Source DB: PubMed Journal: Glob Health Epidemiol Genom ISSN: 2054-4200
Fig. 1.Proportion of individuals (N = 912) in visited houses (N = 289) who consented, refused, were not at home or were unavailable. Unavailable: individuals from visited houses who were found to have moved away (n = 107) or passed away since the most recent enumeration (n = 12). Individual not at home: eligible individuals who were not at home at the time of the visit.
Summary of individuals living in houses visited by the study team.
| Eligible individuals living in visited houses1 (n, %) | Invited2 (n, % of eligible individuals) | Consented (n, % of invited) | Refused (n, % of invited) | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Adults | |||||||||
| N | 516 | 270 | (52.3) | 161 | (59.6) | 109 | (40.4) | ||
| Sex | |||||||||
| Male | 250 | (48.4) | 121 | (48.4) | 59 | (48.8) | 62 | (51.2) | |
| Female | 266 | (51.6) | 149 | (56.0) | 102 | (68.5) | 47 | (31.5) | 0.001 |
| Age category (years) | |||||||||
| 18–29 | 148 | (28.7) | 56 | (37.8) | 27 | (48.2) | 29 | (51.8) | |
| 30–39 | 93 | (18.0) | 46 | (49.5) | 31 | (67.4) | 15 | (32.6) | |
| 40–49 | 103 | (20.0) | 52 | (50.5) | 35 | (67.3) | 17 | (32.7) | |
| 50–59 | 87 | (16.9) | 61 | (70.1) | 36 | (59.0) | 25 | (41.0) | |
| 60+ | 85 | (16.5) | 55 | (64.7) | 32 | (58.2) | 23 | (41.8) | 0.239 |
| Ethnicity | |||||||||
| Malay | 191 | (37.0) | 104 | (54.5) | 43 | (41.3) | 61 | (58.7) | |
| Indian | 145 | (28.1) | 57 | (39.3) | 41 | (71.9) | 16 | (28.1) | |
| Chinese | 102 | (19.8) | 58 | (56.9) | 37 | (63.8) | 21 | (36.2) | |
| Bumiputera/Orang Asli | 77 | (14.9) | 50 | (64.9) | 39 | (78.0) | 11 | (22.0) | |
| Other | 1 | (0.2) | 1 | (100.0) | 1 | (100.0) | 0 | (0.0) | <0.001 |
| Children | |||||||||
| N | 277 | 140 | (50.5) | 42 | (30.0) | 98 | (70.0) | ||
| Sex | |||||||||
| Male | 142 | (51.3) | 73 | (51.4) | 23 | (31.5) | 50 | (68.5) | |
| Female | 135 | (48.7) | 67 | (49.6) | 19 | (28.4) | 48 | (71.6) | 0.685 |
| Age category (years) | |||||||||
| 7–12 | 161 | (58.1) | 77 | (47.8) | 17 | (22.1) | 60 | (77.9) | |
| 13–17 | 116 | (41.9) | 63 | (54.3) | 25 | (39.7) | 38 | (60.3) | 0.024 |
| Ethnicity | |||||||||
| Malay | 93 | (33.6) | 42 | (45.2) | 8 | (19.0) | 34 | (81.0) | |
| Indian | 81 | (29.2) | 35 | (43.2) | 9 | (25.7) | 26 | (74.3) | |
| Chinese | 59 | (21.3) | 32 | (54.2) | 12 | (37.5) | 20 | (62.5) | |
| Bumiputera/Orang Asli | 44 | (15.9) | 31 | (70.5) | 13 | (41.9) | 18 | (58.1) | 0.129 |
| Other | 0 | (0.0) | 0 | n/a | 0 | n/a | 0 | n/a | |
1Individuals aged seven years or above and covered in the most recent HDSS enumeration, who had not moved away or passed away since the most recent enumeration.
2Eligible individuals who were available to respond to an invitation to participate in the study at the time of visit.
Differences in distributions across categories of response were compared using Pearson's chi squared or Fisher's exact (cell counts < 5) tests.
Detailed summary of data and sample collection completeness, stratified by sex.
| n (%) | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Adults | Children | |||||||||||
| Overall | Men | Women | Overall | Boys | Girls | |||||||
| N | 161 | 59 | 102 | 42 | 23 | 19 | ||||||
| Questionnaire data | ||||||||||||
| Any questionnaire data post-cleaning | 161 | (100.0) | 59 | (100.0) | 102 | (100.0) | 42 | (100.0) | 23 | (100.0) | 19 | (100.0) |
| Complete questionnaire data post-cleaning | 13 | (8.1) | 6 | (10.2) | 7 | (6.9) | 12 | (28.6) | 8 | (34.8) | 4 | (21.1) |
| Samples for point-of-care analysis | ||||||||||||
| Capillary (finger-prick) blood sample successfully obtained | 161 | (100.0) | 59 | (100.0) | 102 | (100.0) | 42 | (100.0) | 23 | (100.0) | 19 | (100.0) |
| Samples for analysis and storage collected at full volume | ||||||||||||
| Any venous blood sample1 | 143 | (88.8) | 57 | (96.6) | 86 | (84.3) | 41 | (97.6) | 23 | (100.0) | 18 | (94.7) |
| All venous blood samples2 | 111 | (68.9) | 43 | (72.9) | 68 | (66.7) | 38 | (90.5) | 22 | (95.7) | 16 | (84.2) |
| Any venous blood sample1 or hair sample or urine sample | 161 | (100.0) | 59 | (100.0) | 102 | (100.0) | ||||||
| Any venous blood sample1 and hair sample and urine sample | 115 | (71.4) | 34 | (57.6) | 81 | (79.4) | ||||||
| All venous blood samples2 and hair sample and urine sample | 91 | (56.5) | 26 | (44.1) | 65 | (63.7) | ||||||
| Venous blood samples for analysis and storage collected at full volume | ||||||||||||
| Plain serum blood sample | 141 | (87.6) | 57 | (96.6) | 84 | (82.4) | 39 | (92.9) | 22 | (95.7) | 17 | (89.5) |
| EDTA (plasma) blood sample | 139 | (86.3) | 55 | (93.2) | 84 | (82.4) | 41 | (97.6) | 23 | (100.0) | 18 | (94.7) |
| EDTA (whole blood 1) blood sample | 131 | (81.4) | 52 | (88.1) | 79 | (77.5) | 40 | (95.2) | 23 | (100.0) | 17 | (89.5) |
| EDTA (whole blood 2) blood sample | 115 | (71.4) | 48 | (81.4) | 69 | (67.6) | 40 | (95.2) | 23 | (100.0) | 17 | (89.5) |
| Hair and urine samples collected | ||||||||||||
| Hair sample | 134 | (83.2) | 35 | (59.3) | 99 | (97.1) | ||||||
| Urine sample (full volume) | 157 | (97.5) | 59 | (100.0) | 98 | (96.1) | ||||||
| Blood analysis data | ||||||||||||
| Any blood test data | 148 | (91.9) | 58 | (98.3) | 90 | (88.2) | 41 | (97.6) | 23 | (100.0) | 18 | (94.7) |
| Complete blood test data | 125 | (77.6) | 53 | (89.8) | 72 | (70.6) | 29 | (69.0) | 16 | (69.6) | 13 | (68.4) |
EDTA: ethylene diamine tetra-acetic acid.
1At least one of: plain serum or EDTA (plasma) or EDTA (whole blood 1) or EDTA (whole blood 2).
2All of: plain serum and EDTA (plasma) and EDTA (whole blood 1) and EDTA (whole blood 2).
Summary of venous blood sample collection completeness and quality from adults and children.
| n (%) | ||||||||
|---|---|---|---|---|---|---|---|---|
| Any volume | Full volume | Any volume + accepted by laboratory | Full volume + accepted by laboratory | |||||
| Adults (N = 161) | ||||||||
| Plain serum blood sample | 148 | (91.9) | 141 | (87.6) | 145 | (90.1) | 141 | (87.6) |
| EDTA (plasma) blood sample | 142 | (88.2) | 139 | (86.3) | 142 | (88.2) | 139 | (86.3) |
| EDTA (whole blood 1) blood sample | 141 | (87.6) | 131 | (81.4) | 139 | (86.3) | 131 | (81.4) |
| EDTA (whole blood 2) blood sample | 133 | (82.6) | 115 | (71.4) | 132 | (82.0) | 115 | (71.4) |
| At least one blood sample | 148 | (91.9) | 143 | (88.8) | 145 | (90.1) | 143 | (88.8) |
| All blood samples | 133 | (82.6) | 111 | (68.9) | 132 | (82.0) | 111 | (68.9) |
| Children (N = 42) | ||||||||
| Plain serum blood sample | 41 | (97.6) | 39 | (92.9) | 40 | (95.2) | 39 | (92.9) |
| EDTA (plasma) blood sample | 41 | (97.6) | 41 | (97.6) | 41 | (97.6) | 41 | (97.6) |
| EDTA (whole blood 1) blood sample | 40 | (95.2) | 40 | (95.2) | 40 | (95.2) | 40 | (95.2) |
| EDTA (whole blood 2) blood sample | 40 | (95.2) | 40 | (95.2) | 40 | (95.2) | 40 | (95.2) |
| At least one blood sample | 41 | (97.6) | 41 | (97.6) | 41 | (97.6) | 41 | (97.6) |
| All blood samples | 40 | (95.2) | 38 | (90.5) | 39 | (92.9) | 38 | (90.5) |
EDTA: ethylene diamine tetra-acetic acid.
Crude prevalence of selected lifestyle, biophysical and blood-based risk factors in the study population.
| Number and crude prevalence (n, %) | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Overall | Men | Women | Overall | Boys | Girls | |||||||||
| N | 161 | 59 (36.7) | 102 (63.4) | 42 | 23 (54.8) | 19 (45.2) | ||||||||
| Current smoker | 24 | (14.9) | 22 | (37.3) | 2 | (2.0) | <0.001 | 2 | (4.8) | 2 | (8.7) | 0 | (0.0) | 0.492 |
| Any alcohol consumption in past 12 months | 20 | (12.4) | 14 | (23.7) | 6 | (5.9) | 0.001 | 1 | (2.4) | 1 | (4.4) | 0 | (0.0) | 1.000 |
| Low fruit and vegetable consumption | 157 | (98.1) | 59 | (100.0) | 98 | (97.0) | 0.297 | 38 | (92.7) | 22 | (95.7) | 16 | (88.9) | 0.573 |
| Insufficient physical activity | 63 | (39.1) | 18 | (30.5) | 45 | (44.1) | 0.088 | |||||||
| Overweight | 97 | (60.6) | 32 | (54.2) | 65 | (64.4) | 0.206 | 10 | (23.8) | 5 | (21.7) | 5 | (26.3) | 0.729 |
| Obesity | 39 | (24.4) | 10 | (17.0) | 29 | (28.7) | 0.095 | 3 | (7.1) | 0 | (0.0) | 3 | (15.8) | 0.084 |
| Underweight | 5 | (11.9) | 5 | (21.7) | 0 | (0.0) | 0.053 | |||||||
| Stunting | 3 | (7.1) | 2 | (8.7) | 1 | (5.3) | 0.573 | |||||||
| Central obesity | 100 | (62.5) | 26 | (44.1) | 74 | (73.3) | <0.001 | 1 | (2.4) | 0 | (0.0) | 1 | (5.3) | 0.452 |
| Elevated waist to hip ratio | 84 | (52.5) | 34 | (57.6) | 50 | (49.5) | 0.321 | |||||||
| Hypertension1 | 71 | (44.1) | 30 | (50.9) | 41 | (40.2) | 0.190 | 6 | (14.3) | 5 | (21.7) | 1 | (5.3) | 0.197 |
| Elevated HbA1c2 | 38 | (23.8) | 8 | (13.6) | 30 | (29.7) | 0.021 | 0 | (0.0) | 0 | (0.0) | 0 | (0.0) | |
| Anaemia | 26 | (16.2) | 0 | (0.0) | 26 | (25.5) | <0.001 | 4 | (9.5) | 0 | (0.0) | 4 | (21.1) | 0.035 |
| Elevated total cholesterol1 | 12 | (8.2) | 5 | (8.6) | 7 | (7.9) | 0.870 | 8 | (19.5) | 2 | (8.7) | 6 | (33.3) | 0.109 |
| Low HDL cholesterol | 22 | (15.0) | 11 | (19.0) | 11 | (12.4) | 0.345 | 6 | (14.6) | 4 | (17.4) | 2 | (11.1) | 0.679 |
| Elevated triglycerides | 56 | (38.1) | 26 | (44.8) | 30 | (33.7) | 0.175 | 15 | (36.6) | 9 | (39.1) | 6 | (33.3) | 0.702 |
HbA1c: glycated haemoglobin. HDL: high-density lipoprotein.
Classification of all risk factors is described in the Supplementary Methods.
Differences in distributions between men and women or boys and girls were assessed using Pearson's chi squared or Fisher's exact (cell counts < 5) test.
N was reduced due to missing observations for the following measures: (1) Low fruit and vegetable consumption among girls (N = 18); (2) Overweight, obesity, central obesity and elevated waist to hip ratio and elevated HbA1c among women (N = 101); (3) Elevated HbA1c in girls (N = 18); (4) All cholesterol and triglyceride measures among girls (N = 18), men (N = 58) and women (N = 89).
1Measures for hypertension and elevated cholesterol prevalence included individuals who reported being told they had elevated blood pressure or cholesterol.
2HbA1c as measured at the point of care.