Literature DB >> 30255462

GTCreator: a flexible annotation tool for image-based datasets.

Jorge Bernal1, Aymeric Histace2, Marc Masana3, Quentin Angermann2, Cristina Sánchez-Montes4, Cristina Rodríguez de Miguel4, Maroua Hammami2, Ana García-Rodríguez4, Henry Córdova4, Olivier Romain2, Gloria Fernández-Esparrach4, Xavier Dray2,5, F Javier Sánchez3.   

Abstract

PURPOSE: Methodology evaluation for decision support systems for health is a time-consuming task. To assess performance of polyp detection methods in colonoscopy videos, clinicians have to deal with the annotation of thousands of images. Current existing tools could be improved in terms of flexibility and ease of use.
METHODS: We introduce GTCreator, a flexible annotation tool for providing image and text annotations to image-based datasets. It keeps the main basic functionalities of other similar tools while extending other capabilities such as allowing multiple annotators to work simultaneously on the same task or enhanced dataset browsing and easy annotation transfer aiming to speed up annotation processes in large datasets.
RESULTS: The comparison with other similar tools shows that GTCreator allows to obtain fast and precise annotation of image datasets, being the only one which offers full annotation editing and browsing capabilites.
CONCLUSION: Our proposed annotation tool has been proven to be efficient for large image dataset annotation, as well as showing potential of use in other stages of method evaluation such as experimental setup or results analysis.

Keywords:  Annotation tool; Benchmark; Colonoscopy; Evaluation; Validation framework

Mesh:

Year:  2018        PMID: 30255462     DOI: 10.1007/s11548-018-1864-x

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  3 in total

1.  Towards a better understanding of annotation tools for medical imaging: a survey.

Authors:  Manar Aljabri; Manal AlAmir; Manal AlGhamdi; Mohamed Abdel-Mottaleb; Fernando Collado-Mesa
Journal:  Multimed Tools Appl       Date:  2022-03-25       Impact factor: 2.577

2.  In vivo computer-aided diagnosis of colorectal polyps using white light endoscopy.

Authors:  Ana García-Rodríguez; Yael Tudela; Henry Córdova; Sabela Carballal; Ingrid Ordás; Leticia Moreira; Eva Vaquero; Oswaldo Ortiz; Liseth Rivero; F Javier Sánchez; Miriam Cuatrecasas; Maria Pellisé; Jorge Bernal; Glòria Fernández-Esparrach
Journal:  Endosc Int Open       Date:  2022-09-14

3.  Unravelling the effect of data augmentation transformations in polyp segmentation.

Authors:  Luisa F Sánchez-Peralta; Artzai Picón; Francisco M Sánchez-Margallo; J Blas Pagador
Journal:  Int J Comput Assist Radiol Surg       Date:  2020-09-28       Impact factor: 2.924

  3 in total

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