| Literature DB >> 30252914 |
Nick D Van Skike, Nana K Minkah, Chad H Hogan, Gary Wu, Peter T Benziger, Darby G Oldenburg, Mehmet Kara, Deborah M Kim-Holzapfel, Douglas W White, Scott A Tibbetts, Jarrod B French, Laurie T Krug.
Abstract
[This corrects the article DOI: 10.1371/journal.ppat.1006843.].Entities:
Year: 2018 PMID: 30252914 PMCID: PMC6155549 DOI: 10.1371/journal.ppat.1007319
Source DB: PubMed Journal: PLoS Pathog ISSN: 1553-7366 Impact factor: 6.823
Fig 1Divergence of the gammaherpesvirus vFGARAT family.
(A) Phylogenetic tree of the vFGARATs of the indicated γ-hepesviruses (Genebank ID located in S1 Table). (B) Phylogenetic alignment using BLOSUM62 with previously characterized domains of the vFGARATs. (C) Pairwise alignment showing degrees of identity (lower left corner of table) or similarity (upper right corner of table) between the respective N-terminal or C-terminal portions of the indicated vFGARATs. The division point for each vFGARAT (red vertical line in B) was based on dotplot analysis for each indicated vFGARATS compared to MHV68 ORF75C.
Frequencies of cell populations reactivating viral genomes in C57BL/6 mice.
| Virus | Route of infection | Organ | dpi | Total # of cells harvested | Frequency of reactivating splenocytes (one in x cells) | Total # of cells reactivating latent virus |
|---|---|---|---|---|---|---|
| i.n. | Spleen | 16 | 9.1 x108 | 4.1 x 103 | 2.2 x 105 | |
| i.n. | Spleen | 16 | 3.6 x108 | 5.2 x 105 | 6.9 x 102 | |
| i.n. | Spleen | 16 | 0.6 x109 | 6.9 x 105 | 8.7 x 102 | |
| i.n. | Spleen | 16 | 0.7 x109 | 6.7 x 105 | 1.0 x 103 | |
| i.p. | Spleen | 18 | 5.0 x108 | 2.0 x104 | 2.5 x 104 | |
| i.p. | Spleen | 18 | 3.6 x108 | 1.0 x105 | 3.6 x 103 | |
| i.p. | PEC | 18 | 4.4 x107 | 3.0x103 | 1.5 x 104 | |
| i.p. | PEC | 18 | 3.5 x107 | 2.1x103 | 1.6 x 104 | |
| i.n. | Spleen | 16 | 1.3 x109 | 6.1x103 | 2.1 x 105 | |
| i.n. | Spleen | 16 | 0.9 x109 | 6.8x103 | 1.3 x 105 | |
| i.n. | Spleen | 16 | 1.5 x109 | 6.8x103 | 2.2 x 105 |
a Infection with recombinant MHV68 viruses
b i.n., intranasal; i.p., intraperitoneal
c Organ harvested for limiting dilution analysis (MLN, mediastinal lymph node PBMC, peripheral blood mononuclear cell)
d The frequency data were determined from the mean of two to five independent experiments with cells from the indicated organs. Organs were pooled from three to five mice per experiment.
e The total number of cells reactivating latent virus per mouse was extrapolated using the frequency value generated from the limiting dilution analysis together with the total number of splenocytes or PEC cells harvested.