Literature DB >> 30248414

Whole-genome sequencing reveals genetic signature of bedaquiline resistance in a clinical isolate of Mycobacterium tuberculosis.

Kiran Chawla1, Elena Martinez2, Ajay Kumar1, Vishnu Prasad Shenoy1, Vitali Sintchenko3.   

Abstract

OBJECTIVES: The emergence of multidrug-resistant (MDR) and extensively drug-resistant (XDR) Mycobacterium tuberculosis strains has opened up new challenges for tuberculosis (TB) control in India. This study examined molecular markers of resistance to bedaquiline, a new antituberculous drug with the potential to dramatically improve MDR-TB treatment outcomes and to reduce mortality.
METHODS: A clinical M. tuberculosis isolate with a MDR-TB profile was subjected to whole-genome sequencing using an Illumina NextSeq500 platform, followed by genome-wide sequence analysis.
RESULTS: A mutation in the Rv0678 coding region associated with in vitro bedaquiline resistance was identified. The strain represented the Delhi/CAS lineage.
CONCLUSIONS: This first report of a potentially bedaquiline-resistant M. tuberculosis strain in India highlights the role of genome-wide sequence analysis of isolates from TB cases with a history of treatment in countries with a high burden of MDR-TB and XDR-TB.
Copyright © 2018 International Society for Chemotherapy of Infection and Cancer. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Bedaquiline; Drug resistance; Genome sequencing; High-burden country; Mycobacterium tuberculosis; Tuberculosis

Mesh:

Substances:

Year:  2018        PMID: 30248414     DOI: 10.1016/j.jgar.2018.09.006

Source DB:  PubMed          Journal:  J Glob Antimicrob Resist        ISSN: 2213-7165            Impact factor:   4.035


  6 in total

1.  Identification of Mutations Conferring Tryptanthrin Resistance to Mycobacterium smegmatis.

Authors:  Svetlana G Frolova; Ksenia M Klimina; Ravinder Kumar; Aleksey A Vatlin; Deepak B Salunke; Pravin Kendrekar; Valery N Danilenko; Dmitry A Maslov
Journal:  Antibiotics (Basel)       Date:  2020-12-23

2.  Genetic variants and their association with phenotypic resistance to bedaquiline in Mycobacterium tuberculosis: a systematic review and individual isolate data analysis.

Authors:  Nabila Ismail; Emmanuel Rivière; Jason Limberis; Stella Huo; John Z Metcalfe; Rob M Warren; Annelies Van Rie
Journal:  Lancet Microbe       Date:  2021-08-31

Review 3.  Application of Next Generation Sequencing for Diagnosis and Clinical Management of Drug-Resistant Tuberculosis: Updates on Recent Developments in the Field.

Authors:  Navisha Dookie; Azraa Khan; Nesri Padayatchi; Kogieleum Naidoo
Journal:  Front Microbiol       Date:  2022-03-24       Impact factor: 5.640

4.  Thompson loop: opportunities for antitubercular drug design by targeting the weak spot in demethylmenaquinone methyltransferase protein.

Authors:  Adeniyi T Adewumi; Opeyemi S Soremekun; Mary B Ajadi; Mahmoud E S Soliman
Journal:  RSC Adv       Date:  2020-06-19       Impact factor: 4.036

5.  Comparison of Culture With Antibiogram to Next-Generation Sequencing Using Bacterial Isolates and Formalin-Fixed, Paraffin-Embedded Gastric Biopsies.

Authors:  Kristina G Hulten; Robert M Genta; Ira N Kalfus; Yi Zhou; Hongjun Zhang; David Y Graham
Journal:  Gastroenterology       Date:  2021-07-19       Impact factor: 33.883

Review 6.  Whole Genome Sequencing for the Analysis of Drug Resistant Strains of Mycobacterium tuberculosis: A Systematic Review for Bedaquiline and Delamanid.

Authors:  Luisa Maria Nieto Ramirez; Karina Quintero Vargas; Gustavo Diaz
Journal:  Antibiotics (Basel)       Date:  2020-03-23
  6 in total

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