PURPOSE: To develop and validate a new algorithm called "dictionary-based electric properties tomography" (dbEPT) for deriving tissue electric properties from measured B1 maps. METHODS: Inspired by Magnetic Resonance fingerprinting, dbEPT uses a dictionary of local patterns ("atoms") of B1 maps and corresponding electric properties distributions, derived from electromagnetic field simulations. For reconstruction, a pattern from a measured B1 map is compared with the B1 atoms of the dictionary. The B1 atom showing the best match with the measured B1 pattern yields the optimum electric properties pattern that is chosen for reconstruction. Matching was performed through machine learning algorithms. Two dictionaries, using transmit and transceive phases, were evaluated. The spatial distribution of local matching distance between optimal atom and measured pattern yielded a reconstruction reliability map. The method was applied to reconstruct conductivity of 4 volunteers' brains. A conventional, Helmholtz-based Electric properties tomography (EPT) reconstruction was performed for reference. Noise performance was studied through phantom simulations. RESULTS: Quantitative values of conductivity agree with literature values. Results of the 2 dictionaries exhibit only minor differences. Somewhat larger differences are visible between dbEPT and Helmholtz-based EPT. Quantified by the correlation between conductivity and anatomic images, dbEPT depicts brain details more clearly than Helmholtz-based EPT. Matching distance is minimal in homogeneous brain ventricles and increases with tissue heterogeneity. Central processing unit time was approximately 2 minutes per dictionary training and 3 minutes per brain conductivity reconstruction using standard hardware equipment. CONCLUSION: A new, dictionary-based approach for reconstructing electric properties is presented. Its conductivity reconstruction is able to overcome the EPT transceive-phase problem.
PURPOSE: To develop and validate a new algorithm called "dictionary-based electric properties tomography" (dbEPT) for deriving tissue electric properties from measured B1 maps. METHODS: Inspired by Magnetic Resonance fingerprinting, dbEPT uses a dictionary of local patterns ("atoms") of B1 maps and corresponding electric properties distributions, derived from electromagnetic field simulations. For reconstruction, a pattern from a measured B1 map is compared with the B1 atoms of the dictionary. The B1 atom showing the best match with the measured B1 pattern yields the optimum electric properties pattern that is chosen for reconstruction. Matching was performed through machine learning algorithms. Two dictionaries, using transmit and transceive phases, were evaluated. The spatial distribution of local matching distance between optimal atom and measured pattern yielded a reconstruction reliability map. The method was applied to reconstruct conductivity of 4 volunteers' brains. A conventional, Helmholtz-based Electric properties tomography (EPT) reconstruction was performed for reference. Noise performance was studied through phantom simulations. RESULTS: Quantitative values of conductivity agree with literature values. Results of the 2 dictionaries exhibit only minor differences. Somewhat larger differences are visible between dbEPT and Helmholtz-based EPT. Quantified by the correlation between conductivity and anatomic images, dbEPT depicts brain details more clearly than Helmholtz-based EPT. Matching distance is minimal in homogeneous brain ventricles and increases with tissue heterogeneity. Central processing unit time was approximately 2 minutes per dictionary training and 3 minutes per brain conductivity reconstruction using standard hardware equipment. CONCLUSION: A new, dictionary-based approach for reconstructing electric properties is presented. Its conductivity reconstruction is able to overcome the EPT transceive-phase problem.
Authors: Stefano Mandija; Ettore F Meliadò; Niek R F Huttinga; Peter R Luijten; Cornelis A T van den Berg Journal: Sci Rep Date: 2019-06-20 Impact factor: 4.379
Authors: Soraya Gavazzi; Yulia Shcherbakova; Lambertus W Bartels; Lukas J A Stalpers; Jan J W Lagendijk; Hans Crezee; Cornelis A T van den Berg; Astrid L H M W van Lier Journal: Magn Reson Med Date: 2019-09-04 Impact factor: 4.668
Authors: Soraya Gavazzi; Cornelis A T van den Berg; Mark H F Savenije; H Petra Kok; Peter de Boer; Lukas J A Stalpers; Jan J W Lagendijk; Hans Crezee; Astrid L H M W van Lier Journal: Magn Reson Med Date: 2020-04-21 Impact factor: 4.668