Literature DB >> 30244200

Potential utility of the Genedrive point-of-care test for HCV RNA detection.

Alba Llibre1,2, Yusuke Shimakawa3, Darragh Duffy1,2.   

Abstract

Entities:  

Keywords:  HCV; diagnostic virology; screening

Mesh:

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Year:  2018        PMID: 30244200      PMCID: PMC6839793          DOI: 10.1136/gutjnl-2018-317218

Source DB:  PubMed          Journal:  Gut        ISSN: 0017-5749            Impact factor:   23.059


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In an article in Gut,1 Lemoine and Tillman reviewed our recent publication on the development and validation of a novel point-of-care (POC) HCV viral assay.2 They acknowledge that Genedrive is the only CE-In Vitro Diagnostic-qualified device for HCV detection, and that the limit of detection (LOD: 1406–3203 IU/mL) permits identification of the vast majority of HCV chronic cases.3 However, they emphasise some limitations of the study and Genedrive. One limitation highlighted is the need for plasma which is still required for 100% of HCV clinical tests. Nevertheless, recent studies demonstrated microfluidic plasma separation without centrifugation4 or with low-cost hand-powered paper centrifuges.5 It is feasible to foresee such devices overcoming the need for conventional centrifuges and facilitating Genedrive testing. They also question whether 15 µL of plasma can be obtained by fingerprick. Published studies report 20–25 µL per drop of blood,6 so 1 drop should be sufficient. Furthermore, devices to collect 100 µL of blood from a single fingerstick are now available.7 Technology evolves rapidly to make new tools available which may further facilitate the use of the Genedrive test. The Xpert technology (Cepheid) illustrates these constant improvements, with the latest version requiring only 100 µL blood,7 in contrast to the current 1 mL plasma. Whether Genedrive could be used for monitoring treatment responses was not addressed in our initial analysis but is part of ongoing studies. In reference to cartridges surviving extreme temperatures, while formal stability studies are ongoing, test reagents are certified at 2°C–28°C for 12 months, permitting cold chain-free storage. Regarding early separation of plasma being required to prevent HCV RNA degradation, it is stable in EDTA whole blood for 24 hours at room temperature and 4 days at 4°C8. Although our study was not designed to test this, a large time between sample collection and testing was reported within African samples. For cases where high haemolysis was observed, there was no loss of performance, but additional studies are required. Lemoine and Tillmann highlight that 26/1055 samples required retesting with only 16 giving definitive results. If these ambiguous results are included, sensitivity (99.2%) and specificity (98.8%) are still very good. For the 10 samples without a result, 6 were HCVpos with viral loads close to LOD. Because a very small sample volume is used, and 2/3 replicates must be positive, in cases of low viral load, the absence of a viral particle ultimately affects the diagnostic accuracy. For the four HCVneg indeterminate samples, we can speculate on the possible effects of interfering substances. While a number were tested, we did not identify any that impacted Genedrive’s performance. Nonetheless, there are many compounds that could potentially affect assay function, as recently encountered for an IL28B single nucleotide polymorphism (SNP) POC assay.9 While the authors are enthusiastic for GeneXpert, which has advanced the diagnostics options for HCV, they fail to mention one major limitation: the use of toxic cartridges requiring double cylinder high temperature (≥850°C) incineration, which is challenging to decentralise, in particular in resource-limited settings.10 In contrast, Genedrive contains non-toxic materials, making waste management much easier. We agree that a real-life study in POC conditions is required, including a detailed cost analysis. However, as stated in our original discussion, we maintain that this study was a required step for development and validation of the Genedrive HCV test. It has helped to establish global distributions in Africa and Asia generating real-world data and will encourage new developments to address this clinical need. It has resulted in a novel, easy-to-use, portable platform for decentralisation of HCV testing, which may have a positive impact on the continuum of care from diagnosis to treatment.
  7 in total

1.  A survey of apparent blood volumes and sample geometries among filter paper bloodspot samples submitted for lead screening.

Authors:  Heather R Peck; Denise M Timko; James D Landmark; Douglas F Stickle
Journal:  Clin Chim Acta       Date:  2008-10-30       Impact factor: 3.786

2.  What is required from HCV point-of-care tests to reduce the burden of hepatitis C infection? 'Development and clinical validation of the genedrive point-of-care test for qualitative detection of hepatitis C virus'.

Authors:  Maud Lemoine; Hans L Tillmann
Journal:  Gut       Date:  2018-06-29       Impact factor: 23.059

3.  Evaluation of the Xpert HCV Viral Load point-of-care assay from venepuncture-collected and finger-stick capillary whole-blood samples: a cohort study.

Authors:  Jason Grebely; Francois M J Lamoury; Behzad Hajarizadeh; Yasmin Mowat; Alison D Marshall; Sahar Bajis; Philippa Marks; Janaki Amin; Julie Smith; Michael Edwards; Carla Gorton; Nadine Ezard; David Persing; Marika Kleman; Philip Cunningham; Beth Catlett; Gregory J Dore; Tanya L Applegate
Journal:  Lancet Gastroenterol Hepatol       Date:  2017-04-22

4.  Stability of hepatitis C virus RNA in blood samples by TaqMan real-time PCR.

Authors:  Kenan Sener; Mehmet Yapar; Orhan Bedir; Cem Gül; Omer Coskun; Ayhan Kubar
Journal:  J Clin Lab Anal       Date:  2010       Impact factor: 2.352

5.  Microdevice for plasma separation from whole human blood using bio-physical and geometrical effects.

Authors:  Siddhartha Tripathi; Y V BalaVarun Kumar; Amit Agrawal; Amit Prabhakar; Suhas S Joshi
Journal:  Sci Rep       Date:  2016-06-09       Impact factor: 4.379

6.  An in vitro diagnostic certified point of care single nucleotide test for IL28B polymorphisms.

Authors:  Darragh Duffy; Estelle Mottez; Shaun Ainsworth; Tan-Phuc Buivan; Aurelie Baudin; Muriel Vray; Ben Reed; Arnaud Fontanet; Alexandra Rohel; Ventzislava Petrov-Sanchez; Laurent Abel; Ioannis Theodorou; Gino Miele; Stanislas Pol; Matthew L Albert
Journal:  PLoS One       Date:  2017-09-06       Impact factor: 3.240

7.  Development and clinical validation of the Genedrive point-of-care test for qualitative detection of hepatitis C virus.

Authors:  Alba Llibre; Yusuke Shimakawa; Matthew L Albert; Darragh Duffy; Estelle Mottez; Shaun Ainsworth; Tan-Phuc Buivan; Rick Firth; Elliott Harrison; Arielle R Rosenberg; Jean-François Meritet; Arnaud Fontanet; Pablo Castan; Antonio Madejón; Mark Laverick; Allison Glass; Raquel Viana; Stanislas Pol; C Patrick McClure; William Lucien Irving; Gino Miele
Journal:  Gut       Date:  2018-04-03       Impact factor: 23.059

  7 in total
  2 in total

1.  Diagnostic Performance and Usability of the Genedrive® HCV ID Kit in Two Decentralized Settings in Cameroon and Georgia.

Authors:  Francois M J Lamoury; Richard Njouom; Marie Amougou-Atsama; Euloge Yiagnigni Mfopou; Nino Berishvili; Manana Sologashvili; Emmanuel Fajardo; Agnes Malobela; Aurélien Macé; Maxwell Chirehwa; Maia Alkhazashvili; Elena Ivanova Reipold
Journal:  Diagnostics (Basel)       Date:  2021-04-22

2.  Rapid Visual Detection of Hepatitis C Virus Using Reverse Transcription Recombinase-Aided Amplification-Lateral Flow Dipstick.

Authors:  Haili Wang; Yuhang Zhang; Jingming Zhou; Ming Li; Yumei Chen; Yankai Liu; Hongliang Liu; Peiyang Ding; Chao Liang; Xifang Zhu; Ying Zhang; Cheng Xin; Gaiping Zhang; Aiping Wang
Journal:  Front Cell Infect Microbiol       Date:  2022-02-17       Impact factor: 5.293

  2 in total

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