Literature DB >> 30226926

Genomics, bio specimens, and other biological data: Current status and future directions.

Barry S Rosenstein1,2, Arvind Rao3, Jean M Moran3, Daniel E Spratt3, Marc S Mendonca4,5, Bissan Al-Lazikani6, Charles S Mayo3, Corey Speers3.   

Abstract

Entities:  

Keywords:  biospecimens; data storage; genomics; informatics; radiogenomics

Mesh：

Year:  2018        PMID： 30226926      PMCID： PMC6214357          DOI： 10.1002/mp.12912

Source DB:  PubMed          Journal:  Med Phys        ISSN： 0094-2405            Impact factor:   4.071


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  18 in total

1.  Genetic predictors of adverse radiotherapy effects: the Gene-PARE project.

Authors:  Alice Y Ho; David P Atencio; Sheila Peters; Richard G Stock; Silvia C Formenti; Jamie A Cesaretti; Sheryl Green; Bruce Haffty; Karen Drumea; Larisa Leitzin; Abraham Kuten; David Azria; Mahmut Ozsahin; Jens Overgaard; Christian N Andreassen; Cynthia S Trop; Janelle Park; Barry S Rosenstein
Journal:  Int J Radiat Oncol Biol Phys       Date:  2006-07-01       Impact factor: 7.038

Review 2.  Tackling the widespread and critical impact of batch effects in high-throughput data.

Authors:  Jeffrey T Leek; Robert B Scharpf; Héctor Corrada Bravo; David Simcha; Benjamin Langmead; W Evan Johnson; Donald Geman; Keith Baggerly; Rafael A Irizarry
Journal:  Nat Rev Genet       Date:  2010-09-14       Impact factor: 53.242

3.  Defining precision: The precision medicine initiative trials NCI-MPACT and NCI-MATCH.

Authors:  Geraldine O'Sullivan Coyne; Naoko Takebe; Alice P Chen
Journal:  Curr Probl Cancer       Date:  2017-02-11       Impact factor: 3.187

4.  Distributed learning: Developing a predictive model based on data from multiple hospitals without data leaving the hospital - A real life proof of concept.

Authors:  Arthur Jochems; Timo M Deist; Johan van Soest; Michael Eble; Paul Bulens; Philippe Coucke; Wim Dries; Philippe Lambin; Andre Dekker
Journal:  Radiother Oncol       Date:  2016-10-28       Impact factor: 6.280

Review 5.  Radiogenomics: Identification of Genomic Predictors for Radiation Toxicity.

Authors:  Barry S Rosenstein
Journal:  Semin Radiat Oncol       Date:  2017-10       Impact factor: 5.934

6.  The REQUITE project: validating predictive models and biomarkers of radiotherapy toxicity to reduce side-effects and improve quality of life in cancer survivors.

Authors:  C West; D Azria; J Chang-Claude; S Davidson; P Lambin; B Rosenstein; D De Ruysscher; C Talbot; H Thierens; R Valdagni; A Vega; M Yuille
Journal:  Clin Oncol (R Coll Radiol)       Date:  2014-09-27       Impact factor: 4.126

7.  RAPPER: the radiogenomics of radiation toxicity.

Authors:  N G Burnet; G C Barnett; R M Elliott; D P Dearnaley; P D P Pharoah; A M Dunning; C M L West
Journal:  Clin Oncol (R Coll Radiol)       Date:  2013-05-01       Impact factor: 4.126

8.  STROGAR - STrengthening the Reporting Of Genetic Association studies in Radiogenomics.

Authors:  Sarah L Kerns; Dirk de Ruysscher; Christian N Andreassen; David Azria; Gillian C Barnett; Jenny Chang-Claude; Susan Davidson; Joseph O Deasy; Alison M Dunning; Harry Ostrer; Barry S Rosenstein; Catharine M L West; Søren M Bentzen
Journal:  Radiother Oncol       Date:  2013-08-27       Impact factor: 6.280

9.  Comprehensive genomic characterization defines human glioblastoma genes and core pathways.

Authors: 
Journal:  Nature       Date:  2008-09-04       Impact factor: 49.962

10.  An integrated encyclopedia of DNA elements in the human genome.

Authors: 
Journal:  Nature       Date:  2012-09-06       Impact factor: 49.962
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  2 in total

1.  Tumor Heterogeneity Research and Innovation in Biologically Based Radiation Therapy From the National Cancer Institute Radiation Research Program Portfolio.

Authors:  Jeffrey C Buchsbaum; Michael G Espey; Ceferino Obcemea; Jacek Capala; Mansoor Ahmed; Pataje G Prasanna; Bhadrasain Vikram; Julie A Hong; Beverly Teicher; Molykutty J Aryankalayil; Michelle A Bylicky; C Norman Coleman
Journal:  J Clin Oncol       Date:  2022-03-04       Impact factor: 50.717

2.  DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer.

Authors:  Qixin Lian; Bo Wang; Lijun Fan; Junqiang Sun; Guilai Wang; Jidong Zhang
Journal:  Cancer Cell Int       Date:  2020-07-29       Impact factor: 5.722
  2 in total

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