| Literature DB >> 30224824 |
Helle B Hydeskov1,2, Akbar Dastjerdi3, Kevin P Hopkins1, Marie-Pierre Ryser-Degiorgis4, Frederik Widén5, Andrew A Cunningham1, Becki Lawson6.
Abstract
Sporadic cases of herpesvirus-associated disease have been reported in the Western European hedgehog (Erinaceus europaeus), but there has been little surveillance for, nor any sequence characterisation of, herpesviruses in this species to date. A nested pan-herpesvirus polymerase chain reaction (PCR) targeting a region of the DNA polymerase gene was used to test 129 Western European hedgehogs from across Great Britain, 2011-2016; 59 (46%) of which were PCR-positive. In addition, samples from two previously published cases of fatal herpesvirus infection in E. europaeus, from Sweden and Switzerland, were positive using this PCR. No statistically significant relationship was detected between PCR result and sex, age class, year or season for the British hedgehogs tested. In most PCR-positive animals (19/22) from which liver and brain were tested separately, both were PCR-positive. Sanger sequencing of amplicons from 59 British hedgehogs revealed at least two novel viruses within the Gammaherpesvirinae. Thirteen of these hedgehogs had liver and brain tissues screened for microscopic abnormalities, of which one had non-suppurative meningoencephalitis, but neither intranuclear inclusion bodies nor herpesvirus virions (on electron microscopical examination) were identified. Sequencing of the whole DNA polymerase gene confirmed two genetically different Human alphaherpesvirus 1 viruses in the Swedish and Swiss hedgehogs.Entities:
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Year: 2018 PMID: 30224824 PMCID: PMC6141580 DOI: 10.1038/s41598-018-31900-w
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
PCR overlapping primer sets designed to amplify the entire DNA polymerase gene of hedgehog alphaherpesviruses.
| Primer set no. | Forward primer | Reverse primer |
|---|---|---|
| 1 | 5′ GTC CGG TAA TTT TGC CAT C 3′ | 5′ GTA CAC GTG AAA GAC GGT GAC 3′ |
| 2 | 5′ CAC GAC GGT CAC CTC AAG 3′ | 5′ AGT CGA AGT TGA TGA TGT TGT ACC 3′ |
| 3 | 5′ GAA TTC GAG ATG CTG TTG G 3′ | 5′ ATA GCT CAG GTC CTT CTT CTT G 3′ |
| 4 | 5′ GAT TAT AAC CGA CAA GAT CAA GC 3′ | 5′ AGT TAC ACA CGA CCT TGA TGG 3′ |
| 5 | 5′ AGA GAG CCT CCT CAG CAT C 3′ | 5′ CAA CAG GTG GGA GAA GTA ATA GTC 3′ |
| 6 | 5′ CTG CTG GTG TCC GAG CTG 3′ | 5′ ACA TTT ATT GTA AAA TGA GGG ACA TC 3′ |
| 7 | 5′ AAA AGG TTT ATT CCC GAA GTG 3′ | 5′ CAC ATG CTG TAC GTC ATC TTT C 3′ |
| 8 | 5′ TGA GCA TCC GGT CTA TGA G 3′ | 5′ ATG GGC TAC TAC CTA GGC ATC 3′ |
Pan-herpesvirus PCR-positive percentage of Western European hedgehogs (Erinaceus europaeus) in Great Britain for different groups (n = 129).
| Group |
| No. of PCR-positives | No. of PCR-negatives | PCR-positive percentage (%) | 95% CIa (%) |
|---|---|---|---|---|---|
|
| |||||
| Male | 79 | 33 | 46 | 42 | 31–53 |
| Female | 48 | 26 | 22 | 54 | 39–68 |
| Unknown | 2 | 0 | 2 | 0 | 0–80 |
|
| |||||
| Adult | 70 | 39 | 31 | 56 | 43–67 |
| Subadult | 10 | 3 | 7 | 30 | 8–65 |
| Juvenile | 38 | 13 | 25 | 34 | 20–51 |
| Unknown | 11 | 4 | 7 | 36 | 12–68 |
|
| |||||
| 2011 | 1 | 1 | 0 | 100 | 5–100 |
| 2012 | 24 | 11 | 13 | 46 | 26–67 |
| 2013 | 18 | 10 | 8 | 56 | 31–78 |
| 2014 | 34 | 15 | 19 | 44 | 28–62 |
| 2015 | 45 | 18 | 27 | 40 | 26–56 |
| 2016 | 7 | 4 | 3 | 57 | 20–88 |
|
| |||||
| Winter | 16 | 9 | 7 | 56 | 31–79 |
| Spring | 31 | 16 | 15 | 52 | 33–69 |
| Summer | 39 | 13 | 26 | 33 | 20–50 |
| Autumn | 43 | 21 | 22 | 49 | 34–64 |
| Total | 129 | 59 | 70 | 46 | 37–55 |
aCI = confidence interval. bWinter = December-February, spring = March-May, summer = June-August, autumn = September-November.
Figure 1Geographical distribution of Western European hedgehogs (Erinaceus europaeus) subjected to the pan-herpesvirus PCR in Great Britain (n = 129). Red = PCR-positive hedgehog, blue = PCR-negative hedgehog. Locations with both PCR-positive and PCR-negative hedgehogs are shown as PCR-positive. The map was created using RStudio (RStudio Desktop version 1.0.143)[19].