Literature DB >> 30211866

Assessing patterns for compressive fluorescence lifetime imaging.

M Ochoa, Q Pian, R Yao, N Ducros, X Intes.   

Abstract

A novel hyperspectral single pixel system was used to compare different compressive basis patterns for intensity imaging, lifetime imaging, and FRET quantification. Six popular basis patterns were compared experimentally in a phantom containing two fluorescent dyes. The basis patterns that performed best for lifetime quantification were used to measure FRET occurrence in well-plate samples with varying acceptor-donor ratios. The ABS-WP approach using Haar patterns and the compressive sensing approach with Hadamard Ranked patterns displayed the best overall performances at a 50% compression ratio.

Entities:  

Year:  2018        PMID: 30211866      PMCID: PMC6261333          DOI: 10.1364/OL.43.004370

Source DB:  PubMed          Journal:  Opt Lett        ISSN: 0146-9592            Impact factor:   3.776


  16 in total

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Authors:  Zhou Wang; Alan Conrad Bovik; Hamid Rahim Sheikh; Eero P Simoncelli
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Review 2.  Fluorescence lifetime measurements and biological imaging.

Authors:  Mikhail Y Berezin; Samuel Achilefu
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

3.  Reduced temporal sampling effect on accuracy of time-domain fluorescence lifetime Förster resonance energy transfer.

Authors:  Travis Omer; Lingling Zhao; Xavier Intes; Juergen Hahn
Journal:  J Biomed Opt       Date:  2014-08       Impact factor: 3.170

4.  Multilayer fluorescence imaging on a single-pixel detector.

Authors:  Kaikai Guo; Shaowei Jiang; Guoan Zheng
Journal:  Biomed Opt Express       Date:  2016-06-01       Impact factor: 3.732

5.  Intracellular FRET-based probes: a review.

Authors:  Clare E Rowland; Carl W Brown; Igor L Medintz; James B Delehanty
Journal:  Methods Appl Fluoresc       Date:  2015-10-29       Impact factor: 3.009

6.  FLIM-FRET for Cancer Applications.

Authors:  Shilpi Rajoria; Lingling Zhao; Xavier Intes; Margarida Barroso
Journal:  Curr Mol Imaging       Date:  2014

7.  Compressive hyperspectral time-resolved wide-field fluorescence lifetime imaging.

Authors:  Qi Pian; Ruoyang Yao; Nattawut Sinsuebphon; Xavier Intes
Journal:  Nat Photonics       Date:  2017-06-05       Impact factor: 38.771

8.  Development of an optical imaging platform for functional imaging of small animals using wide-field excitation.

Authors:  Vivek Venugopal; Jin Chen; Xavier Intes
Journal:  Biomed Opt Express       Date:  2010-07-15       Impact factor: 3.732

9.  Simultaneous real-time visible and infrared video with single-pixel detectors.

Authors:  Matthew P Edgar; Graham M Gibson; Richard W Bowman; Baoqing Sun; Neal Radwell; Kevin J Mitchell; Stephen S Welsh; Miles J Padgett
Journal:  Sci Rep       Date:  2015-05-22       Impact factor: 4.379

10.  Non-invasive in vivo imaging of near infrared-labeled transferrin in breast cancer cells and tumors using fluorescence lifetime FRET.

Authors:  Ken Abe; Lingling Zhao; Ammasi Periasamy; Xavier Intes; Margarida Barroso
Journal:  PLoS One       Date:  2013-11-21       Impact factor: 3.240

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  10 in total

1.  Hyperspectral wide-field time domain single-pixel diffuse optical tomography platform.

Authors:  Qi Pian; Ruoyang Yao; Xavier Intes
Journal:  Biomed Opt Express       Date:  2018-11-15       Impact factor: 3.732

2.  High compression deep learning based single-pixel hyperspectral macroscopic fluorescence lifetime imaging in vivo.

Authors:  M Ochoa; A Rudkouskaya; R Yao; P Yan; M Barroso; X Intes
Journal:  Biomed Opt Express       Date:  2020-09-02       Impact factor: 3.732

3.  Design and characterization of a time-domain optical tomography platform for mesoscopic lifetime imaging.

Authors:  Shan Gao; Mengzhou Li; Jason T Smith; Xavier Intes
Journal:  Biomed Opt Express       Date:  2022-08-10       Impact factor: 3.562

4.  3D k-space reflectance fluorescence tomography via deep learning.

Authors:  Navid Ibtehaj Nizam; Marien Ochoa; Jason T Smith; Xavier Intes
Journal:  Opt Lett       Date:  2022-03-15       Impact factor: 3.560

5.  Macroscopic Fluorescence Lifetime Imaging for Monitoring of Drug-Target Engagement.

Authors:  Marien Ochoa; Alena Rudkouskaya; Jason T Smith; Xavier Intes; Margarida Barroso
Journal:  Methods Mol Biol       Date:  2022

6.  Net-FLICS: fast quantitative wide-field fluorescence lifetime imaging with compressed sensing - a deep learning approach.

Authors:  Ruoyang Yao; Marien Ochoa; Pingkun Yan; Xavier Intes
Journal:  Light Sci Appl       Date:  2019-03-06       Impact factor: 17.782

7.  Single snapshot imaging of optical properties using a single-pixel camera: a simulation study.

Authors:  Enagnon Aguénounon; Foudil Dadouche; Wilfried Uhring; Nicolas Ducros; Sylvain Gioux
Journal:  J Biomed Opt       Date:  2019-04       Impact factor: 3.170

Review 8.  Deep learning in macroscopic diffuse optical imaging.

Authors:  Jason T Smith; Marien Ochoa; Denzel Faulkner; Grant Haskins; Xavier Intes
Journal:  J Biomed Opt       Date:  2022-02       Impact factor: 3.758

9.  Single pixel hyperspectral bioluminescence tomography based on compressive sensing.

Authors:  Alexander Bentley; Jonathan E Rowe; Hamid Dehghani
Journal:  Biomed Opt Express       Date:  2019-10-07       Impact factor: 3.732

10.  Applications of compressive sensing in spatial frequency domain imaging.

Authors:  Ben O L Mellors; Alexander Bentley; Abigail M Spear; Christopher R Howle; Hamid Dehghani
Journal:  J Biomed Opt       Date:  2020-11       Impact factor: 3.170

  10 in total

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