Literature DB >> 30209198

Whole genome sequencing of Mycobacterium tuberculosis.

Andrea M Cabibbe1, Timothy M Walker2, Stefan Niemann3, Daniela M Cirillo1.   

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Year:  2018        PMID： 30209198     DOI： 10.1183/13993003.01163-2018

Source DB:  PubMed          Journal:  Eur Respir J        ISSN： 0903-1936            Impact factor:   16.671


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  7 in total

1.  Characterization of Genomic Variants Associated with Resistance to Bedaquiline and Delamanid in Naive Mycobacterium tuberculosis Clinical Strains.

Authors:  S Battaglia; A Spitaleri; A M Cabibbe; C J Meehan; C Utpatel; N Ismail; S Tahseen; A Skrahina; N Alikhanova; S M Mostofa Kamal; A Barbova; S Niemann; R Groenheit; A S Dean; M Zignol; L Rigouts; D M Cirillo
Journal:  J Clin Microbiol       Date:  2020-10-21       Impact factor: 5.948

2.  Deep amplicon sequencing for culture-free prediction of susceptibility or resistance to 13 anti-tuberculous drugs.

Authors:  Agathe Jouet; Cyril Gaudin; Nelly Badalato; Caroline Allix-Béguec; Stéphanie Duthoy; Alice Ferré; Maren Diels; Yannick Laurent; Sandy Contreras; Silke Feuerriegel; Stefan Niemann; Emmanuel André; Michel K Kaswa; Elisa Tagliani; Andrea Cabibbe; Vanessa Mathys; Daniela Cirillo; Bouke C de Jong; Leen Rigouts; Philip Supply
Journal:  Eur Respir J       Date:  2021-03-18       Impact factor: 16.671

3.  ASAP-GxNet project in Burkina Faso: fulfil country capacity gaps to ensure efficient utilisation of GeneXpert instruments in tuberculosis care and cascade.

Authors:  Riccardo Alagna; Tinnoga Lèon Sawadogo; Adjima Combary; Souba Diandé; Daniela Maria Cirillo
Journal:  ERJ Open Res       Date:  2019-02-01

Review 4.  Deciphering drug resistance in Mycobacterium tuberculosis using whole-genome sequencing: progress, promise, and challenges.

Authors:  Keira A Cohen; Abigail L Manson; Christopher A Desjardins; Thomas Abeel; Ashlee M Earl
Journal:  Genome Med       Date:  2019-07-25       Impact factor: 11.117

5.  Application of Targeted Next-Generation Sequencing Assay on a Portable Sequencing Platform for Culture-Free Detection of Drug-Resistant Tuberculosis from Clinical Samples.

Authors:  Timothy C Rodwell; Daniela M Cirillo; Andrea M Cabibbe; Andrea Spitaleri; Simone Battaglia; Rebecca E Colman; Anita Suresh; Swapna Uplekar
Journal:  J Clin Microbiol       Date:  2020-09-22       Impact factor: 5.948

6.  Use of Whole-Genome Sequencing to Explore Mycobacterium tuberculosis Complex Circulating in a Hotspot Department in France.

Authors:  Typhaine Billard-Pomares; Julie Marin; Pauline Quagliaro; Frédéric Méchaï; Violaine Walewski; Samira Dziri; Etienne Carbonnelle
Journal:  Microorganisms       Date:  2022-08-06

7.  A model of tuberculosis clustering in low incidence countries reveals more transmission in the United Kingdom than the Netherlands between 2010 and 2015.

Authors:  Ellen Brooks-Pollock; Leon Danon; Hester Korthals Altes; Jennifer A Davidson; Andrew M T Pollock; Dick van Soolingen; Colin Campbell; Maeve K Lalor
Journal:  PLoS Comput Biol       Date:  2020-03-27       Impact factor: 4.475
  7 in total

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