Literature DB >> 30209182

Proficiency of WHO Global Foodborne Infections Network External Quality Assurance System Participants in Identification and Susceptibility Testing of Thermotolerant Campylobacter spp. from 2003 to 2012.

Susanne Karlsmose Pedersen1, Jaap A Wagenaar2,3,4, Håkan Vigre5, Louise Roer5, Matthew Mikoleit6,7, Awa Aidara-Kane8, Amy L Cawthorne8, Frank M Aarestrup5, Rene S Hendriksen5.   

Abstract

Campylobacter spp. are foodborne and waterborne pathogens. While rather accurate estimates for these pathogens are available in industrialized countries, a lack of diagnostic capacity in developing countries limits accurate assessments of prevalence in many regions. Proficiency in the identification and susceptibility testing of these organisms is critical for surveillance and control efforts. The aim of the study was to assess performance for identification and susceptibility testing of thermotolerant Campylobacter spp. among laboratories participating in the World Health Organization (WHO) Global Foodborne Infections Network (GFN) External Quality Assurance System (EQAS) over a 9-year period. Participants (primarily national-level laboratories) were encouraged to self-evaluate their performance as part of continuous quality improvement. The ability to correctly identify Campylobacter spp. varied by year and ranged from 61.9% (2008) to 90.7% (2012), and the ability to correctly perform antimicrobial susceptibility testing (AST) for Campylobacter spp. appeared to steadily increase from 91.4% to 93.6% in the test period (2009 to 2012). The poorest performance (60.0% correct identification and 86.8% correct AST results) was observed in African laboratories. Overall, approximately 10% of laboratories reported either an incorrect identification or antibiogram. As most participants were supranational reference laboratories, these data raise significant concerns regarding capacity and proficiency at the local clinical level. Addressing these diagnostic challenges is critical for both patient-level management and broader surveillance and control efforts.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  Campylobacter coli; Campylobacter jejuni; Global Foodborne Infections Network; World Health Organization; antimicrobial susceptibility testing; identification; proficiency test; quality assurance

Mesh:

Substances:

Year:  2018        PMID: 30209182      PMCID: PMC6204681          DOI: 10.1128/JCM.01066-18

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  3 in total

1.  Results of use of WHO Global Salm-Surv external quality assurance system for antimicrobial susceptibility testing of Salmonella isolates from 2000 to 2007.

Authors:  Rene S Hendriksen; Anne Mette Seyfarth; Arne B Jensen; Jean Whichard; Susanne Karlsmose; Kevin Joyce; Matthew Mikoleit; Stephanie M Delong; François-Xavier Weill; Awa Aidara-Kane; Danilo M A Lo Fo Wong; Frederick J Angulo; Henrik C Wegener; Frank M Aarestrup
Journal:  J Clin Microbiol       Date:  2008-11-19       Impact factor: 5.948

2.  Quinolone and macrolide resistance in Campylobacter jejuni and C. coli: resistance mechanisms and trends in human isolates.

Authors:  J Engberg; F M Aarestrup; D E Taylor; P Gerner-Smidt; I Nachamkin
Journal:  Emerg Infect Dis       Date:  2001 Jan-Feb       Impact factor: 6.883

3.  WHO Global Salm-Surv external quality assurance system for serotyping of Salmonella isolates from 2000 to 2007.

Authors:  Rene S Hendriksen; Matthew Mikoleit; Valeria P Carlson; Susanne Karlsmose; Antonio R Vieira; Arne B Jensen; Anne Mette Seyfarth; Stephanie M DeLong; François-Xavier Weill; Danilo Marino Armando Lo Fo Wong; Frederick J Angulo; Henrik C Wegener; Frank M Aarestrup
Journal:  J Clin Microbiol       Date:  2009-07-01       Impact factor: 5.948

  3 in total
  7 in total

1.  High Prevalence of Fluoroquinolone-Resistant Campylobacter Bacteria in Sheep and Increased Campylobacter Counts in the Bile and Gallbladders of Sheep Medicated with Tetracycline in Feed.

Authors:  Jing Xia; Jinji Pang; Yizhi Tang; Zuowei Wu; Lei Dai; Kritika Singh; Changyun Xu; Brandon Ruddell; Amanda Kreuder; Lining Xia; Xiaoping Ma; Kelly S Brooks; Melda M Ocal; Orhan Sahin; Paul J Plummer; Ronald W Griffith; Qijing Zhang
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

Review 2.  Using Genomics to Track Global Antimicrobial Resistance.

Authors:  Rene S Hendriksen; Valeria Bortolaia; Heather Tate; Gregory H Tyson; Frank M Aarestrup; Patrick F McDermott
Journal:  Front Public Health       Date:  2019-09-04

3.  Epidemiologic Changes in Over 10 Years of Community-Acquired Bacterial Enteritis in Children.

Authors:  Jae Jin Yang; Kunsong Lee
Journal:  Pediatr Gastroenterol Hepatol Nutr       Date:  2022-01-07

4.  ResFinder - an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes.

Authors:  Alfred Ferrer Florensa; Rolf Sommer Kaas; Philip Thomas Lanken Conradsen Clausen; Derya Aytan-Aktug; Frank M Aarestrup
Journal:  Microb Genom       Date:  2022-01

5.  Prevalence and antimicrobial resistance of Campylobacter jejuni and C. coli identified in a slaughterhouse in Argentina.

Authors:  Mariana E Schreyer; Carolina R Olivero; Eugenia Rossler; Lorena P Soto; Laureano S Frizzo; Jorge A Zimmermann; Marcelo L Signorini; Zbrun M Virginia
Journal:  Curr Res Food Sci       Date:  2022-03-17

6.  ResFinder 4.0 for predictions of phenotypes from genotypes.

Authors:  Valeria Bortolaia; Rolf S Kaas; Etienne Ruppe; Marilyn C Roberts; Stefan Schwarz; Vincent Cattoir; Alain Philippon; Rosa L Allesoe; Ana Rita Rebelo; Alfred Ferrer Florensa; Linda Fagelhauer; Trinad Chakraborty; Bernd Neumann; Guido Werner; Jennifer K Bender; Kerstin Stingl; Minh Nguyen; Jasmine Coppens; Basil Britto Xavier; Surbhi Malhotra-Kumar; Henrik Westh; Mette Pinholt; Muna F Anjum; Nicholas A Duggett; Isabelle Kempf; Suvi Nykäsenoja; Satu Olkkola; Kinga Wieczorek; Ana Amaro; Lurdes Clemente; Joël Mossong; Serge Losch; Catherine Ragimbeau; Ole Lund; Frank M Aarestrup
Journal:  J Antimicrob Chemother       Date:  2020-12-01       Impact factor: 5.790

Review 7.  Review on Stress Tolerance in Campylobacter jejuni.

Authors:  Se-Hun Kim; Ramachandran Chelliah; Sudha Rani Ramakrishnan; Ayyappasamy Sudalaiyadum Perumal; Woo-Suk Bang; Momna Rubab; Eric Banan-Mwine Daliri; Kaliyan Barathikannan; Fazle Elahi; Eunji Park; Hyeon Yeong Jo; Su-Bin Hwang; Deog Hwan Oh
Journal:  Front Cell Infect Microbiol       Date:  2021-02-04       Impact factor: 5.293

  7 in total

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