Literature DB >> 30208348

Changes in nitrogen related functional genes along soil pH, C and nutrient gradients in the charosphere.

Mengjie Yu1, Jun Meng1, Lu Yu1, Weiqin Su1, Muhammad Afzal1, Yong Li1, Philip C Brookes1, Marc Redmile-Gordon2, Yu Luo3, Jianming Xu1.   

Abstract

The interface between biochar and soil differs from both the bulk soil and the biochar itself, and has been termed the "charosphere". However, a complete definition of the charosphere, including aspects of size, properties, functional reach and effects on soil processes, is still required. In this study, the distributions of functional genes related to the soil N cycle within the charosphere were investigated over a multi-sectional gradient. We found that concentrations of dissolved organic carbon (DOC), available phosphorus and exchangeable cations (Ca2+, Mg2+, K+) increased with proximity to the biochar surface (termed the 'near charosphere'). Similarly, the abundance of bacterial amoA was greater in the near charosphere, while archaeal amoA abundance was relatively homogenous. This taxonomic asymmetry resulted in a shift in the predominant ammonia-oxidizers from ammonia-oxidizing bacteria (AOB) to ammonia-oxidizing archaea (AOA) in the far charosphere. This was associated with other factors such as decreasing pH and carbon availability with increasing distance from the biochar. Moreover, the ratio of nosZ/(nirS + nirK) genes also showed functionally asymmetry in the charosphere: increasing with increasing distance from the biochar. This is the first study to map spatial distributions of a set functional genes related to soil N cycling in the soil around biochar. This exploration into the underlying heterogeneity of biochar-affected mechanisms of N transformation provides new insight into the functional geometry of the charosphere.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  AOA/AOB ratio; Biochar; Charosphere; nosZ/(nirS + nirK) ratio; pH regulation

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Year:  2018        PMID: 30208348     DOI: 10.1016/j.scitotenv.2018.08.372

Source DB:  PubMed          Journal:  Sci Total Environ        ISSN: 0048-9697            Impact factor:   7.963


  3 in total

1.  Habitat heterogeneity induced by pyrogenic organic matter in wildfire-perturbed soils mediates bacterial community assembly processes.

Authors:  Lujun Zhang; Bin Ma; Caixian Tang; Haodan Yu; Xiaofei Lv; Jorge L Mazza Rodrigues; Randy A Dahlgren; Jianming Xu
Journal:  ISME J       Date:  2021-01-29       Impact factor: 11.217

2.  Light exposure mediates circadian rhythms of rhizosphere microbial communities.

Authors:  Kankan Zhao; Bin Ma; Yan Xu; Erinne Stirling; Jianming Xu
Journal:  ISME J       Date:  2021-03-21       Impact factor: 11.217

3.  Certain Environmental Conditions Maximize Ammonium Accumulation and Minimize Nitrogen Loss During Nitrate Reduction Process by Pseudomonas putida Y-9.

Authors:  Xuejiao Huang; Wenzhou Tie; Deti Xie; Daihua Jiang; Zhenlun Li
Journal:  Front Microbiol       Date:  2021-12-13       Impact factor: 5.640

  3 in total

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