| Literature DB >> 30205469 |
Pasquale Porcu1, Mireille Vonlanthen2, Israel González-Méndez3, Andrea Ruiu4, Ernesto Rivera5.
Abstract
A new series of dendronized bodipys containing pyrene units was synthesized and characterized. Their optical and photophysical properties were determined by absorption and fluorescence spectroscopy. This series includes three different compounds. The first one has an anisole group linked to the bodipy unit, which was used as the reference compound. In the second, the bodipy core is linked to a zero generation dendron with one pyrene unit. The third compound contains a first generation Fréchet-type dendron bearing two pyrene units. In this work, the combination pyrene-bodipy was selected as the donor-acceptor pair for this fluorescence resonance energy transfer (FRET) study. Doubtless, these two chromophores exhibit high quantum yields, high extinction coefficients, and both their excitation and emission wavelengths are located in the visible region. This report presents a FRET study of a novel series of pyrene-bodipy dendritic molecules bearing flexible spacers. We demonstrated via spectroscopic studies that FRET phenomena occur in these dyads.Entities:
Keywords: bodipy; fluorescence resonance energy transfer (FRET); pyrene
Mesh:
Substances:
Year: 2018 PMID: 30205469 PMCID: PMC6225113 DOI: 10.3390/molecules23092289
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1Synthetic route for the aldehydic compounds 3 and 6. Reaction conditions: K2CO3, 18-crown-6, dimethylformamide (DMF), 110 °C, and four hours (yield 86% for 3 and 79% for 6).
Scheme 2Synthesis of the pyrene-labeled bodipy compounds 1, 4, and 7. Reaction conditions (1) trifluoroacetic acid (TFA), CH2Cl2, 4 h, t.a.; (2) DDQ, 45 min; (3) N(Et)3, BF3O(Et)2, 15 min. Yield 46% for 1, 38% for 4, and 47% for 7.
Figure 1Absorption spectra for the compound 1 (1.2 × 10−5 M), a mixture of 1 (1.2 × 10−5 M) and 1-pyrenebutanol at 1.2 × 10−5 M and 2.4 × 10−5 M.
Figure 2Absorption (black) and emission (red) spectra for the compound 4.
Absorption coefficients, quantum yields, and fluorescence resonance energy transfer (FRET) efficiencies for the pyrene-labelled aldehyde precursors 3 and 6 and the pyrene-labeled bodipy compounds 1, 4, and 7.
| Compound | λmax Absorption | λmax Emission | Φpyrene b
| Φbodipy c
| Φbodipy c
| EFRET d |
|---|---|---|---|---|---|---|
|
| 344/54,000 | 375 | 0.30 ± 0.03 | - | - | - |
|
| 344/101,000 | 375, 480 | 0.39 ± 0.02 | - | - | - |
|
| 501/87,000 | 509 | - | 0.32 ± 0.01 | 0.71 ± 0.02 | - |
|
| 344/47,000 | 509 | 0.0085 ± 0.0004 | 0.48 ± 0.02 | 0.65 ± 0.01 | 0.98 |
|
| 344/87,000 | 509 | 0.0097 ± 0.0003 | 0.49 ± 0.01 | 0.71 ± 0.01 | 0.99 |
a Values of the absorption coefficients calculated at 344 and 501 nm for the pyrene and bodipy part, respectively. b All the Φpyrene was calculated using quinine in H2SO4 1 M solution as the reference (0.54) [40,41]. c All the Φbodipy were calculated using fluorescein in NaOH 0.1 M solution as the reference (0.92) [42]. d FRET efficiencies were calculated with the subsequent equation: EFRET = 1 − I(Py+Bodipy)/I(Py), where I(Py+Bodipy) is the integration of the residual emission of pyrene when linked to the bodipy acceptor and I(Py) is the integration of the emission of pyrene in the absence of the bodipy acceptor [41].
Figure 3Absorption (black) and emission (red) spectra for compound 7.