Literature DB >> 30202860

Pointless spatial modeling.

Katie Wilson1, Jon Wakefield2.   

Abstract

The analysis of area-level aggregated summary data is common in many disciplines including epidemiology and the social sciences. Typically, Markov random field spatial models have been employed to acknowledge spatial dependence and allow data-driven smoothing. In the context of an irregular set of areas, these models always have an ad hoc element with respect to the definition of a neighborhood scheme. In this article, we exploit recent theoretical and computational advances to carry out modeling at the continuous spatial level, which induces a spatial model for the discrete areas. This approach also allows reconstruction of the continuous underlying surface, but the interpretation of such surfaces is delicate since it depends on the quality, extent and configuration of the observed data. We focus on models based on stochastic partial differential equations. We also consider the interesting case in which the aggregate data are supplemented with point data. We carry out Bayesian inference and, in the language of generalized linear mixed models, if the link is linear, an efficient implementation of the model is available via integrated nested Laplace approximations. For nonlinear links, we present two approaches: a fully Bayesian implementation using a Hamiltonian Monte Carlo algorithm and an empirical Bayes implementation, that is much faster and is based on Laplace approximations. We examine the properties of the approach using simulation, and then apply the model to the classic Scottish lip cancer data.
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Entities:  

Keywords:  Change of support problem; Ecological bias; Hamiltonian Monte Carlo; Markovian Gaussian random fields

Mesh:

Year:  2020        PMID: 30202860     DOI: 10.1093/biostatistics/kxy041

Source DB:  PubMed          Journal:  Biostatistics        ISSN: 1465-4644            Impact factor:   5.899


  6 in total

1.  Small Area Estimation for Disease Prevalence Mapping.

Authors:  Jon Wakefield; Taylor Okonek; Jon Pedersen
Journal:  Int Stat Rev       Date:  2020-07-24       Impact factor: 1.946

2.  Improving disaggregation models of malaria incidence by ensembling non-linear models of prevalence.

Authors:  Tim C D Lucas; Anita K Nandi; Suzanne H Keddie; Elisabeth G Chestnutt; Rosalind E Howes; Susan F Rumisha; Rohan Arambepola; Amelia Bertozzi-Villa; Andre Python; Tasmin L Symons; Justin J Millar; Punam Amratia; Penelope Hancock; Katherine E Battle; Ewan Cameron; Peter W Gething; Daniel J Weiss
Journal:  Spat Spatiotemporal Epidemiol       Date:  2020-07-04

3.  Mapping the endemicity and seasonality of clinical malaria for intervention targeting in Haiti using routine case data.

Authors:  Ewan Cameron; Alyssa J Young; Katherine A Twohig; Emilie Pothin; Darlene Bhavnani; Amber Dismer; Jean Baptiste Merilien; Karen Hamre; Phoebe Meyer; Arnaud Le Menach; Justin M Cohen; Samson Marseille; Jean Frantz Lemoine; Marc-Aurèle Telfort; Michelle A Chang; Kimberly Won; Alaine Knipes; Eric Rogier; Punam Amratia; Daniel J Weiss; Peter W Gething; Katherine E Battle
Journal:  Elife       Date:  2021-06-01       Impact factor: 8.140

4.  Harmonizing child mortality data at disparate geographic levels.

Authors:  Neal Marquez; Jon Wakefield
Journal:  Stat Methods Med Res       Date:  2021-02-01       Impact factor: 2.494

5.  Modeling and presentation of vaccination coverage estimates using data from household surveys.

Authors:  Tracy Qi Dong; Jon Wakefield
Journal:  Vaccine       Date:  2021-04-03       Impact factor: 4.169

6.  A downscaling approach to compare COVID-19 count data from databases aggregated at different spatial scales.

Authors:  Andre Python; Andreas Bender; Marta Blangiardo; Janine B Illian; Ying Lin; Baoli Liu; Tim C D Lucas; Siwei Tan; Yingying Wen; Davit Svanidze; Jianwei Yin
Journal:  J R Stat Soc Ser A Stat Soc       Date:  2021-09-15       Impact factor: 2.175

  6 in total

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