Literature DB >> 30201832

Connectome to behaviour: modelling Caenorhabditis elegans at cellular resolution.

Stephen D Larson1, Padraig Gleeson2,3, André E X Brown4,5.   

Abstract

It has been 30 years since the 'mind of the worm' was published in Philosophical Transactions B (White et al 1986 Phil. Trans. R. Soc. Lond. B314, 1-340). Predicting Caenorhabditis elegans' behaviour from its wiring diagram has been an enduring challenge since then. This special theme issue of Philosophical Transactions B combines research from neuroscientists, physicists, mathematicians and engineers to discuss advances in neural activity imaging, behaviour quantification and multiscale simulations, and how they are bringing the goal of whole-animal modelling at cellular resolution within reach.This article is part of a discussion meeting issue 'Connectome to behaviour: modelling C. elegans at cellular resolution'.
© 2018 The Author(s).

Entities:  

Keywords:  Caenorhabditis elegans; behaviour; connectome; nervous system; open data; simulation

Mesh:

Year:  2018        PMID: 30201832      PMCID: PMC6158229          DOI: 10.1098/rstb.2017.0366

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.671


  27 in total

1.  The structure of the nervous system of the nematode Caenorhabditis elegans.

Authors:  J G White; E Southgate; J N Thomson; S Brenner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1986-11-12       Impact factor: 6.237

Review 2.  The computational worm: spatial orientation and its neuronal basis in C. elegans.

Authors:  Shawn R Lockery
Journal:  Curr Opin Neurobiol       Date:  2011-07-18       Impact factor: 6.627

Review 3.  Clues to basis of exploratory behaviour of the C. elegans snout from head somatotropy.

Authors:  John White
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-09-10       Impact factor: 6.237

4.  Towards systematic, data-driven validation of a collaborative, multi-scale model of Caenorhabditis elegans.

Authors:  Richard C Gerkin; Russell J Jarvis; Sharon M Crook
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-09-10       Impact factor: 6.237

5.  Three-dimensional simulation of the Caenorhabditis elegans body and muscle cells in liquid and gel environments for behavioural analysis.

Authors:  Andrey Palyanov; Sergey Khayrulin; Stephen D Larson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-09-10       Impact factor: 6.237

6.  A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans.

Authors:  Steven B Augustine; Kristy J Lawton; Theodore H Lindsay; Tod R Thiele; William M Roberts; Eduardo J Izquierdo; Serge Faumont; Rebecca A Lindsay; Matthew Cale Britton; Navin Pokala; Cornelia I Bargmann; Shawn R Lockery
Journal:  Elife       Date:  2016-01-29       Impact factor: 8.140

Review 7.  The beginning of connectomics: a commentary on White et al. (1986) 'The structure of the nervous system of the nematode Caenorhabditis elegans'.

Authors:  Scott W Emmons
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-04-19       Impact factor: 6.237

8.  A cellular and regulatory map of the GABAergic nervous system of C. elegans.

Authors:  Marie Gendrel; Emily G Atlas; Oliver Hobert
Journal:  Elife       Date:  2016-10-14       Impact factor: 8.140

Review 9.  OpenWorm: overview and recent advances in integrative biological simulation of Caenorhabditis elegans.

Authors:  Gopal P Sarma; Chee Wai Lee; Tom Portegys; Vahid Ghayoomie; Travis Jacobs; Bradly Alicea; Matteo Cantarelli; Michael Currie; Richard C Gerkin; Shane Gingell; Padraig Gleeson; Richard Gordon; Ramin M Hasani; Giovanni Idili; Sergey Khayrulin; David Lung; Andrey Palyanov; Mark Watts; Stephen D Larson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-09-10       Impact factor: 6.237

Review 10.  Sensorimotor integration in Caenorhabditis elegans: a reappraisal towards dynamic and distributed computations.

Authors:  Harris S Kaplan; Annika L A Nichols; Manuel Zimmer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-09-10       Impact factor: 6.237

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