| Literature DB >> 30194445 |
Karen Lebret1,2, Örjan Östman3, Silke Langenheder4, Stina Drakare5, François Guillemette6, Eva S Lindström4.
Abstract
class="Disease">Algal blooms occur frequently in lakes and oceans and the causes and consequences of those are often studied. In this study, we focus on a less well known tyclass="Chemical">pe of algal bloom by the freshEntities:
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Year: 2018 PMID: 30194445 PMCID: PMC6128840 DOI: 10.1038/s41598-018-31892-7
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
VIP scores of the PLS analysis of the 2014 data including the EEMs and PARAFRAC variables, in bold are the VIP values above 1 which are considered important factors.
| Parameters | VIP |
|---|---|
| Fe | |
| Absorbance 420 nm | |
| Total phosphorus | |
| TOC | |
| Mn | |
| Total Nitrogen | |
| Turbidity | |
| pH | |
| HIX (Fluorescence index) | |
| SUVA | 0.90 |
| %C5 (PARAFAC component) | 0.89 |
| FRESH (Fluorescence index) | 0.80 |
| Latitude | 0.78 |
| %C4 (PARAFAC component) | 0.76 |
| Na | 0.74 |
| %C6 (PARAFAC component) | 0.70 |
| Cl | 0.62 |
| %C1 (PARAFAC component) | 0.57 |
| %C3 (PARAFAC component) | 0.52 |
| Water Temperature | 0.48 |
| Alkalinity | 0.37 |
| Ca | 0.35 |
| Longitude | 0.31 |
| SO4 | 0.23 |
| FI (Fluorescence index) | 0.23 |
| Si | 0.15 |
| K | 0.14 |
| NH4-N | 0.09 |
| Mg | 0.09 |
| Conductivity | 0.07 |
| %C2 (PARAFAC component) | 0.01 |
Figure 1VIP values of the PLS analyses of the different explanatory variables for G. semen abundance for each year. Values above 1 are considered as important variables.
Partial r2 –values for the explanatory variables with VIP > 1 from stepwise linear regression on abundance of G. semen each year.
| Year | AbsF420 | Fe | pH | TOC | TotN | TotP |
|---|---|---|---|---|---|---|
| 2010 | Not Incl. | 0.03 | 0.06 | Not Incl. | Not Incl. | 0.06 |
| 2011 | Not Incl. | Not Incl. | 0.15 | Not Incl. | Not Incl. | 0.09 |
| 2012 | Not Incl. | Not Incl. | 0.22 | Not Incl. | Not Incl. | 0.21 |
| 2013 | Not Incl. | Not Incl. | 0.29 | Not Incl. | Not Incl. | 0.13 |
| 2014 | Not Incl. | Not Incl. | 0.21 | Not Incl. | Not Incl. | 0.16 |
‘Not Incl.’ means a variable was not included in the final model based on model AIC.
Figure 2Partial dependency plots between G. semen abundances and iron concentrations (A,D,G,J and M) total phosphorus concentration (B,E,H,K and N) and pH (C,F,I,L and O) for 2010 to 2014. A linear relationship would show up as a straight line.
Figure 3Partial dependency plots between G. semen abundances and absorbance at 420 nm (A,D,G,J and M) concentration of total nitrogen (B,E,H,K and N) and concentration of TOC (C,F,I,L and O) for the years 2010 to 2014. A linear relationship would show up as a straight line.
Figure 4Regression tree for the years 2010 to 2014 explaining G. semen abundances using the most important variables according to the PLS analysis.