Literature DB >> 3018677

Nucleotide sequence of an insertion sequence (IS) element identified in the T-DNA region of a spontaneous variant of the Ti-plasmid pTiT37.

J Vanderleyden, J Desair, C De Meirsman, K Michiels, A P Van Gool, M D Chilton, G C Jen.   

Abstract

We have identified and determined the nucleotide sequence of an IS element (IS136) of Agrobacterium tumefaciens. This is the first IS element isolated and sequenced from a nopaline type Ti-plasmid. Our IS element has 32/30 bp inverted repeats with 6 mismatches, is 1,313 bp long and generates 9 bp direct repeats upon integration. IS136 has 3 main open reading frames (ORF's). Only ORF1 (159 codons) is preceded by sequences that are proposed to serve functional roles in transcriptional and translational initiation. No DNA sequence homology was found between IS136 and IS66, an IS element isolated from an octopine type Ti-plasmid.

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Year:  1986        PMID： 3018677      PMCID： PMC311674          DOI： 10.1093/nar/14.16.6699

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  36 in total

Review 1.  Regulatory sequences involved in the promotion and termination of RNA transcription.

Authors:  M Rosenberg; D Court
Journal:  Annu Rev Genet       Date:  1979       Impact factor: 16.830

2.  Promoters of Agrobacterium tumefaciens Ti-plasmid virulence genes.

Authors:  A Das; S Stachel; P Ebert; P Allenza; A Montoya; E Nester
Journal:  Nucleic Acids Res       Date:  1986-02-11       Impact factor: 16.971

3.  Nucleotide sequence of IS26, a new prokaryotic mobile genetic element.

Authors:  B Mollet; S Iida; J Shepherd; W Arber
Journal:  Nucleic Acids Res       Date:  1983-09-24       Impact factor: 16.971

4.  The right hand copy of the nopaline Ti-plasmid 25 bp repeat is required for tumour formation.

Authors:  C H Shaw; M D Watson; G H Carter; C H Shaw
Journal:  Nucleic Acids Res       Date:  1984-08-10       Impact factor: 16.971

5.  Roles of RecBC enzyme and chi sites in homologous recombination.

Authors:  G R Smith; S K Amundsen; A M Chaudhury; K C Cheng; A S Ponticelli; C M Roberts; D W Schultz; A F Taylor
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1984

Review 6.  T-DNA of the Agrobacterium Ti and Ri plasmids.

Authors:  M W Bevan; M D Chilton
Journal:  Annu Rev Genet       Date:  1982       Impact factor: 16.830

7.  Chi mutation in a transposon and the orientation-dependence of Chi phenotype.

Authors:  E Yagil; N A Dower; D Chattoraj; M Stahl; C Pierson; F W Stahl
Journal:  Genetics       Date:  1980-09       Impact factor: 4.562

8.  Isolation of supercoiled colicinogenic factor E 1 DNA sensitive to ribonuclease and alkali.

Authors:  D G Blair; D J Sherratt; D B Clewell; D R Helinski
Journal:  Proc Natl Acad Sci U S A       Date:  1972-09       Impact factor: 11.205

9.  Size, location and polarity of T-DNA-encoded transcripts in nopaline crown gall tumors; common transcripts in octopine and nopaline tumors.

Authors:  L Willmitzer; P Dhaese; P H Schreier; W Schmalenbach; M Van Montagu; J Schell
Journal:  Cell       Date:  1983-04       Impact factor: 41.582

10.  Grown gall plant tumors of abnormal morphology, induced by Agrobacterium tumefaciens carrying mutated octopine Ti plasmids; analysis of T-DNA functions.

Authors:  G Ooms; P J Hooykaas; G Moolenaar; R A Schilperoort
Journal:  Gene       Date:  1981 Jun-Jul       Impact factor: 3.688
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  9 in total

1.  Similarities between nucleotide sequences of insertion elements of Agrobacterium tumefaciens and Pseudomonas savastanoi in relation to Agrobacterium tumefaciens TC-DNA.

Authors:  C De Meirsman; J Desair; J Vanderleyden; A P van Gool; G C Jen
Journal:  Nucleic Acids Res       Date:  1987-12-23       Impact factor: 16.971

2.  Dynamic structure of Agrobacterium tumefaciens Ti plasmids.

Authors:  C Fortin; C Marquis; E W Nester; P Dion
Journal:  J Bacteriol       Date:  1993-08       Impact factor: 3.490

3.  Isolation and characterization of insertion sequence elements from gram-negative bacteria by using new broad-host-range, positive selection vectors.

Authors:  R Simon; B Hötte; B Klauke; B Kosier
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

4.  Cloning and characterization of a tetracycline resistance determinant present in Agrobacterium tumefaciens C58.

Authors:  Z Q Luo; S K Farrand
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

5.  Recovery of nonpathogenic mutant bacteria from tumors caused by several Agrobacterium tumefaciens strains: a frequent event?

Authors:  Pablo Llop; Jesús Murillo; Beatriz Lastra; María M López
Journal:  Appl Environ Microbiol       Date:  2009-08-21       Impact factor: 4.792

6.  Characterization of RFRS9, a second member of the Rhizobium fredii repetitive sequence family from the nitrogen-fixing symbiont R. fredii USDA257.

Authors:  H B Krishnan; S G Pueppke
Journal:  Appl Environ Microbiol       Date:  1993-01       Impact factor: 4.792

7.  Sequence of the iaa and ipt region of different Agrobacterium tumefaciens biotype III octopine strains: reconstruction of octopine Ti plasmid evolution.

Authors:  F Paulus; J Canaday; F Vincent; G Bonnard; C Kares; L Otten
Journal:  Plant Mol Biol       Date:  1991-04       Impact factor: 4.076

8.  Transcription start sites for syrM and nodD3 flank an insertion sequence relic in Rhizobium meliloti.

Authors:  M J Barnett; B G Rushing; R F Fisher; S R Long
Journal:  J Bacteriol       Date:  1996-04       Impact factor: 3.490

9.  Inactivation of a transgene due to transposition of insertion sequence (IS136) of Agrobacterium tumefaciens.

Authors:  Preeti Rawat; Sanjeev Kumar; Deepak Pental; Pradeep Kumar Burma
Journal:  J Biosci       Date:  2009-06       Impact factor: 1.826
  9 in total

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