Literature DB >> 30181041

Incomplete base excision repair contributes to cell death from antibiotics and other stresses.

Charley C Gruber1, Graham C Walker2.   

Abstract

Numerous lethal stresses in bacteria including antibiotics, thymineless death, and MalE-LacZ expression trigger an increase in the production of reactive oxygen species. This results in the oxidation of the nucleotide pool by radicals produced by Fenton chemistry. Following the incorporation of these oxidized nucleotides into the genome, the cell's unsuccessful attempt to repair these lesions through base excision repair (BER) contributes causally to the lethality of these stresses. We review the evidence for this phenomenon of incomplete BER-mediated cell death and discuss how better understanding this pathway could contribute to the development of new antibiotics.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  8-oxo-dG; Antibiotics; Base excision repair; Cell death; Reactive oxygen species; Thymineless death

Mesh:

Substances:

Year:  2018        PMID: 30181041      PMCID: PMC6442677          DOI: 10.1016/j.dnarep.2018.08.014

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  13 in total

1.  Post-stress bacterial cell death mediated by reactive oxygen species.

Authors:  Yuzhi Hong; Jie Zeng; Xiuhong Wang; Karl Drlica; Xilin Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-04       Impact factor: 11.205

2.  A multilayered repair system protects the mycobacterial chromosome from endogenous and antibiotic-induced oxidative damage.

Authors:  Pierre Dupuy; Mir Howlader; Michael S Glickman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-29       Impact factor: 11.205

3.  A White-Box Machine Learning Approach for Revealing Antibiotic Mechanisms of Action.

Authors:  Jason H Yang; Sarah N Wright; Meagan Hamblin; Douglas McCloskey; Miguel A Alcantar; Lars Schrübbers; Allison J Lopatkin; Sangeeta Satish; Amir Nili; Bernhard O Palsson; Graham C Walker; James J Collins
Journal:  Cell       Date:  2019-05-09       Impact factor: 41.582

Review 4.  Bacterial DNA excision repair pathways.

Authors:  Katherine J Wozniak; Lyle A Simmons
Journal:  Nat Rev Microbiol       Date:  2022-02-24       Impact factor: 78.297

Review 5.  Coping with Reactive Oxygen Species to Ensure Genome Stability in Escherichia coli.

Authors:  Belén Mendoza-Chamizo; Anders Løbner-Olesen; Godefroid Charbon
Journal:  Genes (Basel)       Date:  2018-11-21       Impact factor: 4.096

6.  The PHP domain of PolX from Staphylococcus aureus aids high fidelity DNA synthesis through the removal of misincorporated deoxyribo-, ribo- and oxidized nucleotides.

Authors:  Shilpi Nagpal; Deepak T Nair
Journal:  Sci Rep       Date:  2021-02-18       Impact factor: 4.379

7.  Degradation of the Escherichia coli Essential Proteins DapB and Dxr Results in Oxidative Stress, which Contributes to Lethality through Incomplete Base Excision Repair.

Authors:  Charley C Gruber; Vignesh M P Babu; Kamren Livingston; Heer Joisher; Graham C Walker
Journal:  mBio       Date:  2022-02-08       Impact factor: 7.867

8.  The Composites of PCL and Tetranuclear Titanium(IV)-oxo Complexes as Materials Exhibiting the Photocatalytic and the Antimicrobial Activity.

Authors:  Barbara Kubiak; Aleksandra Radtke; Adrian Topolski; Grzegorz Wrzeszcz; Patrycja Golińska; Ewelina Kaszkowiak; Michał Sobota; Jakub Włodarczyk; Mateusz Stojko; Piotr Piszczek
Journal:  Int J Mol Sci       Date:  2021-06-29       Impact factor: 5.923

Review 9.  Bacterial phenotypic heterogeneity in DNA repair and mutagenesis.

Authors:  Maxence S Vincent; Stephan Uphoff
Journal:  Biochem Soc Trans       Date:  2020-04-29       Impact factor: 5.407

10.  Oxazinomycin arrests RNA polymerase at the polythymidine sequences.

Authors:  Ranjit K Prajapati; Petja Rosenqvist; Kaisa Palmu; Janne J Mäkinen; Anssi M Malinen; Pasi Virta; Mikko Metsä-Ketelä; Georgiy A Belogurov
Journal:  Nucleic Acids Res       Date:  2019-11-04       Impact factor: 16.971

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