| Literature DB >> 30180847 |
Hario Baskoro1, Tadashi Sato2, Keiko Karasutani1, Yohei Suzuki1, Aki Mitsui1, Naoko Arano1, Fariz Nurwidya1,3, Motoyasu Kato1, Fumiyuki Takahashi1, Yuzo Kodama1, Kuniaki Seyama1, Kazuhisa Takahashi1.
Abstract
BACKGROUND: Cigarette smoke (CS) exposure causes an abnormal inflammatory response, which can result in chronic obstructive pulmonary disease (COPD). Previous studies show that this disorder predominantly occurs in peripheral or small-airway areas, whereas the same condition has not been identified in the larger airways during the course of COPD. However, the different biochemical and genetic alterations occurring in response to CS exposure among airway epithelial cells from different sites in the lungs have not been fully investigated.Entities:
Keywords: Airway epithelial cells; Chronic obstructive pulmonary disease; Cigarette smoke; Cyclooxygenase-2; Inflammation; Small airway
Mesh:
Year: 2018 PMID: 30180847 PMCID: PMC6122713 DOI: 10.1186/s12890-018-0715-4
Source DB: PubMed Journal: BMC Pulm Med ISSN: 1471-2466 Impact factor: 3.317
Fig. 1Gene-expression profiles after exposure to CSE in SAECs and NHBEs. Two different batches of SAECs and NHBEs were used. Cells were exposed to 2.5% CSE for 24 h or not (controls). Scatter plot of (a) NHBEs and (b) SAECs. The vertical axis represents the relative signal intensity in CSE-exposed cells, and the horizontal axis represents the control (without CSE exposure). Both axes show log scales. c Venn diagram of probes showing significant upregulation in SAECs and NHBEs after CSE exposure. d Venn diagram of probes showing significant downregulation in SAECs and NHBEs after CSE exposure. CSE, cigarette smoke extract; SAECs, small airway epithelial cells; NHBEs, normal human bronchial epithelial cells.
Overrepresented pathways in SAECs based on KEGG analysis
| Pathway |
| Genes |
|---|---|---|
| Rheumatoid arthritis | < 0.001 |
|
| TNF-signaling pathway | 0.001 |
|
| Toll-like receptor-signaling pathway | 0.001 |
|
| Leishmaniasis | 0.001 |
|
| Malaria | 0.004 |
|
| Amoebiasis | 0.005 |
|
| NF-κB-signaling pathway | 0.020 |
|
| MAPK-signaling pathway | 0.026 |
|
| Chagas disease (American trypanosomiasis) | 0.032 |
|
SAECs small airway epithelial cells, KEGG Kyoto Encyclopedia of Genes and Genomes
Overrepresented terms in SAECs by GO enrichment analysis
| GO term |
| Genes |
|---|---|---|
| Inflammatory response | < 0.001 |
|
| Response to vitamin D | < 0.001 |
|
| Response to hypoxia | < 0.001 |
|
| Positive regulation of fever generation | 0.001 |
|
| Wound healing | 0.001 |
|
| Response to lipopolysaccharide | 0.002 |
|
| Ovulation | 0.002 |
|
| Aging | 0.003 |
|
| Cellular response to organic cyclic compound | 0.004 |
|
| Positive regulation of apoptotic process | 0.004 |
|
| Decidualization | 0.005 |
|
| Positive regulation of NF-κB import into nucleus | 0.005 |
|
| Epithelial cell differentiation | 0.005 |
|
| Arachidonic acid metabolic process | 0.007 |
|
| Positive regulation of vascular endothelial growth factor production | 0.007 |
|
| Response to immobilization stress | 0.007 |
|
| Transcription from RNA polymerase II promoter | 0.012 |
|
| Negative regulation of cell cycle | 0.013 |
|
| Apoptotic process | 0.019 |
|
| Positive regulation of transcription from RNA polymerase II promoter | 0.019 |
|
| Embryo implantation | 0.019 |
|
| Positive regulation of nitric oxide biosynthetic | 0.019 |
|
| Cellular response to lipopolysaccharide | 0.023 |
|
| Response to progesterone | 0.024 |
|
| Skeletal muscle cell differentiation | 0.024 |
|
| Response to cAMP | 0.027 |
|
| Cell-cell signaling | 0.033 |
|
| Positive regulation of gene expression | 0.034 |
|
| Neutrophil chemotaxis | 0.040 |
|
SAECs small airway epithelial cells, GO gene ontology
Overrepresented pathways in NHBEs based on KEGG analysis
| Pathway |
| Genes |
|---|---|---|
| JAK-STAT signaling pathway | 0.029 |
|
| Arachidonic acid metabolism | 0.033 |
|
NHBEs normal human bronchial epithelial cells, KEGG Kyoto Encyclopedia of Genes and Genomes
Overrepresented terms in NHBEs by GO enrichment analysis
| GO term |
| Genes |
|---|---|---|
| Doxorubicin metabolic process | < 0.001 |
|
| Daunorubicin metabolic process | < 0.001 |
|
| Retinoid metabolic process | 0.001 |
|
| Positive regulation of peptidyl-tyrosine | 0.003 |
|
| Response to nutrient | 0.038 |
|
NHBEs normal human bronchial epithelial cells, GO gene ontology
Fig. 2Hierarchical clustering analysis of the TNF-signaling pathway. SAECs and NHBEs were exposed to 2.5% CSE for 24 h or not (controls). Two different batches of SAECs and NHBEs were used. The specific cluster containing genes upregulated by CSE exposure predominantly in SAECs is highlighted (right). High relative expression is indicated in green, and low relative expression is indicated in red. CSE, cigarette smoke extract; SAECs, small airway epithelial cells; NHBEs, normal human bronchial epithelial cells.
Fig. 3Effects of CSE exposure on COX-2 expression in SAECs and NHBEs. a COX-2 mRNA and (b) protein expression, with β-actin used as an internal and loading control, respectively. Band size is indicated on the right. Cells were exposed to 2.5% CSE for 24 h or not (controls). c Time-course of COX-2 mRNA expression in SAECs and NHBEs following 2.5% CSE exposure. β-Actin was used as an internal control. d Time course of COX-2 protein expression in SAECs and NHBEs following 2.5% CSE exposure. β-Actin was used as a loading control. Band size is indicated on the right. Values are shown as the mean ± SEM. *p < 0.05; **p < 0.01; *** p < 0.001 compared with NHBEs in (c) and (d). Three batches each of SAECs and NHBEs were evaluated on three separate occasions in all experiments. CSE, cigarette smoke extract; SAECs, small airway epithelial cells; NHBEs, normal human bronchial epithelial cells; COX-2, cyclooxygenase-2
Fig. 4Effects of CS exposure on COX-2 expression in the lungs of C57BL/6 J mice. Mice were exposed to either 3.5% CS or fresh air (control) for 30 min/day for 5 days. Representative immunohistochemistry images of (a) the large-airway area in a control lung, (b) the small-airway area in a control lung, (c) the large-airway area in a CS-exposed lung, and (d) the small-airway area in a CS-exposed lung. Brown color indicates COX-2-positive airway epithelial cells (arrows). Scale bar, 100 μm. Insets are high magnification views of airway epithelial cells. e The ratio of COX-2-positive nuclei to the total count of nuclei present in a field at 400× magnification and determined in 10 different areas of the lung per mouse. Values are shown as the mean ± SEM (n = 3/group). *p < 0.001. CS, cigarette smoke; COX-2, cyclooxygenase-2