Literature DB >> 30170496

Multicenter Study Using Desorption-Electrospray-Ionization-Mass-Spectrometry Imaging for Breast-Cancer Diagnosis.

Andreia M Porcari1,2, Jialing Zhang3, Kyana Y Garza3, Raquel M Rodrigues-Peres4, John Q Lin3, Jonathan H Young3, Robert Tibshirani5, Chandandeep Nagi6, Geisilene R Paiva4, Stacey A Carter7, Luis Otávio Sarian4, Marcos N Eberlin1,8, Livia S Eberlin3.   

Abstract

The histological and molecular subtypes of breast cancer demand distinct therapeutic approaches. Invasive ductal carcinoma (IDC) is subtyped according to estrogen-receptor (ER), progesterone-receptor (PR), and HER2 status, among other markers. Desorption-electrospray-ionization-mass-spectrometry imaging (DESI-MSI) is an ambient-ionization MS technique that has been previously used to diagnose IDC. Aiming to investigate the robustness of ambient-ionization MS for IDC diagnosis and subtyping over diverse patient populations and interlaboratory use, we report a multicenter study using DESI-MSI to analyze samples from 103 patients independently analyzed in the United States and Brazil. The lipid profiles of IDC and normal breast tissues were consistent across different patient races and were unrelated to country of sample collection. Similar experimental parameters used in both laboratories yielded consistent mass-spectral data in mass-to-charge ratios ( m/ z) above 700, where complex lipids are observed. Statistical classifiers built using data acquired in the United States yielded 97.6% sensitivity, 96.7% specificity, and 97.6% accuracy for cancer diagnosis. Equivalent performance was observed for the intralaboratory validation set (99.2% accuracy) and, most remarkably, for the interlaboratory validation set independently acquired in Brazil (95.3% accuracy). Separate classification models built for ER and PR statuses as well as the status of their combined hormone receptor (HR) provided predictive accuracies (>89.0%), although low classification accuracies were achieved for HER2 status. Altogether, our multicenter study demonstrates that DESI-MSI is a robust and reproducible technology for rapid breast-cancer-tissue diagnosis and therefore is of value for clinical use.

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Year:  2018        PMID: 30170496     DOI: 10.1021/acs.analchem.8b01961

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  14 in total

Review 1.  Lipids and cancer: Emerging roles in pathogenesis, diagnosis and therapeutic intervention.

Authors:  Lisa M Butler; Ylenia Perone; Jonas Dehairs; Leslie E Lupien; Vincent de Laat; Ali Talebi; Massimo Loda; William B Kinlaw; Johannes V Swinnen
Journal:  Adv Drug Deliv Rev       Date:  2020-07-23       Impact factor: 15.470

2.  Double Bond Characterization of Free Fatty Acids Directly from Biological Tissues by Ultraviolet Photodissociation.

Authors:  Clara L Feider; Luis A Macias; Jennifer S Brodbelt; Livia S Eberlin
Journal:  Anal Chem       Date:  2020-06-01       Impact factor: 6.986

Review 3.  Mass spectrometry imaging to detect lipid biomarkers and disease signatures in cancer.

Authors:  Matthias Holzlechner; Eliseo Eugenin; Brendan Prideaux
Journal:  Cancer Rep (Hoboken)       Date:  2019-12

4.  The effect of sample age on the metabolic information extracted from formalin-fixed and paraffin embedded tissue samples using desorption electrospray ionization mass spectrometry imaging.

Authors:  Olof Gerdur Isberg; Yuchen Xiang; Sigridur Klara Bodvarsdottir; Jon Gunnlaugur Jonasson; Margret Thorsteinsdottir; Zoltan Takats
Journal:  J Mass Spectrom Adv Clin Lab       Date:  2021-10-28

5.  Distinguishing Non-Small Cell Lung Cancer Subtypes in Fine Needle Aspiration Biopsies by Desorption Electrospray Ionization Mass Spectrometry Imaging.

Authors:  Alena V Bensussan; John Lin; Chunxiao Guo; Ruth Katz; Savitri Krishnamurthy; Erik Cressman; Livia S Eberlin
Journal:  Clin Chem       Date:  2020-11-01       Impact factor: 8.327

6.  Multiplatform Investigation of Plasma and Tissue Lipid Signatures of Breast Cancer Using Mass Spectrometry Tools.

Authors:  Alex Ap Rosini Silva; Marcella R Cardoso; Luciana Montes Rezende; John Q Lin; Fernando Guimaraes; Geisilene R Paiva Silva; Michael Murgu; Denise Gonçalves Priolli; Marcos N Eberlin; Alessandra Tata; Livia S Eberlin; Sophie F M Derchain; Andreia M Porcari
Journal:  Int J Mol Sci       Date:  2020-05-20       Impact factor: 5.923

7.  Early detection of unilateral ureteral obstruction by desorption electrospray ionization mass spectrometry.

Authors:  Shibdas Banerjee; Anny Chuu-Yun Wong; Xin Yan; Bo Wu; Hongjuan Zhao; Robert J Tibshirani; Richard N Zare; James D Brooks
Journal:  Sci Rep       Date:  2019-07-29       Impact factor: 4.379

8.  Accessible and reproducible mass spectrometry imaging data analysis in Galaxy.

Authors:  Melanie Christine Föll; Lennart Moritz; Thomas Wollmann; Maren Nicole Stillger; Niklas Vockert; Martin Werner; Peter Bronsert; Karl Rohr; Björn Andreas Grüning; Oliver Schilling
Journal:  Gigascience       Date:  2019-12-01       Impact factor: 6.524

9.  Spatially resolved metabolomic characterization of muscle invasive bladder cancer by mass spectrometry imaging.

Authors:  Anqi Tu; Neveen Said; David C Muddiman
Journal:  Metabolomics       Date:  2021-07-21       Impact factor: 4.747

10.  Stromal vapors for real-time molecular guidance of breast-conserving surgery.

Authors:  Pierre-Maxence Vaysse; Loes F S Kooreman; Sanne M E Engelen; Bernd Kremer; Steven W M Olde Damink; Ron M A Heeren; Marjolein L Smidt; Tiffany Porta Siegel
Journal:  Sci Rep       Date:  2020-11-18       Impact factor: 4.379

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