Literature DB >> 30166483

Emerging applications for DNA writers and molecular recorders.

Fahim Farzadfard1, Timothy K Lu1.   

Abstract

Natural life is encoded by evolvable, DNA-based memory. Recent advances in dynamic genome-engineering technologies, which we collectively refer to as in vivo DNA writing, have opened new avenues for investigating and engineering biology. This Review surveys these technological advances, outlines their prospects and emerging applications, and discusses the features and current limitations of these technologies for building various genetic circuits for processing and recording information in living cells.
Copyright © 2018, American Association for the Advancement of Science.

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Year:  2018        PMID： 30166483     DOI： 10.1126/science.aat9249

Source DB:  PubMed          Journal:  Science        ISSN： 0036-8075            Impact factor:   47.728


  15 in total

1.  Dynamic control of the distribution of carbon flux between cell growth and butyrate biosynthesis in Escherichia coli.

Authors:  Liang Guo; Jiaxin Lu; Cong Gao; Linpei Zhang; Liming Liu; Xiulai Chen
Journal:  Appl Microbiol Biotechnol       Date:  2021-06-11       Impact factor: 4.813

2.  Efficient, continuous mutagenesis in human cells using a pseudo-random DNA editor.

Authors:  Haiqi Chen; Sophia Liu; Samuel Padula; Daniel Lesman; Kettner Griswold; Allen Lin; Tongtong Zhao; Jamie L Marshall; Fei Chen
Journal:  Nat Biotechnol       Date:  2019-12-16       Impact factor: 54.908

3.  Scalable biological signal recording in mammalian cells using Cas12a base editors.

Authors:  Hannah R Kempton; Kasey S Love; Lucie Y Guo; Lei S Qi
Journal:  Nat Chem Biol       Date:  2022-05-30       Impact factor: 16.174

4.  Methods for measuring the evolutionary stability of engineered genomes to improve their longevity.

Authors:  Scott L Nuismer; Nathan C Layman; Alec J Redwood; Baca Chan; James J Bull
Journal:  Synth Biol (Oxf)       Date:  2021-08-23

5.  Random access DNA memory using Boolean search in an archival file storage system.

Authors:  James L Banal; Tyson R Shepherd; Joseph Berleant; Hellen Huang; Miguel Reyes; Cheri M Ackerman; Paul C Blainey; Mark Bathe
Journal:  Nat Mater       Date:  2021-06-10       Impact factor: 43.841

6.  Overcoming the challenges of cancer drug resistance through bacterial-mediated therapy.

Authors:  Amin Zargar; Samantha Chang; Ankita Kothari; Antoine M Snijders; Jian-Hua Mao; Jessica Wang; Amanda C Hernández; Jay D Keasling; Trever G Bivona
Journal:  Chronic Dis Transl Med       Date:  2020-01-08

7.  Futuristic CRISPR-based biosensing in the cloud and internet of things era: an overview.

Authors:  Abdullahi Umar Ibrahim; Fadi Al-Turjman; Zubaida Sa'id; Mehmet Ozsoz
Journal:  Multimed Tools Appl       Date:  2020-06-08       Impact factor: 2.577

8.  Detection of Marker-Free Precision Genome Editing and Genetic Variation through the Capture of Genomic Signatures.

Authors:  Pierre Billon; Tarun S Nambiar; Samuel B Hayward; Maria P Zafra; Emma M Schatoff; Koichi Oshima; Andrew Dunbar; Marco Breinig; Young C Park; Han S Ryu; Darjus F Tschaharganeh; Ross L Levine; Richard Baer; Adolfo Ferrando; Lukas E Dow; Alberto Ciccia
Journal:  Cell Rep       Date:  2020-03-10       Impact factor: 9.423

9.  In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription.

Authors:  Amjad Askary; Luis Sanchez-Guardado; James M Linton; Duncan M Chadly; Mark W Budde; Long Cai; Carlos Lois; Michael B Elowitz
Journal:  Nat Biotechnol       Date:  2019-11-18       Impact factor: 54.908

Review 10.  CRISPR base editing and prime editing: DSB and template-free editing systems for bacteria and plants.

Authors:  Zhengzheng Jiang; Xulin Hong; Shun Zhang; Ruilian Yao; Yi Xiao
Journal:  Synth Syst Biotechnol       Date:  2020-09-02
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