Literature DB >> 30165243

Secondary findings from whole-exome/genome sequencing evaluating stakeholder perspectives. A review of the literature.

J Delanne1, S Nambot1, A Chassagne2, O Putois3, A Pelissier4, C Peyron4, E Gautier5, J Thevenon1, E Cretin2, A L Bruel6, V Goussot7, F Ghiringhelli7, R Boidot7, F Tran Mau-Them8, C Philippe8, A Vitobello8, L Demougeot9, C Vernin9, A S Lapointe9, M Bardou10, M Luu10, C Binquet10, C Lejeune10, L Joly11, C Juif11, A Baurand11, C Sawka11, G Bertolone11, Y Duffourd12, D Sanlaville13, P Pujol14, D Geneviève14, F Houdayer13, C Thauvin-Robinet15, L Faivre16.   

Abstract

With the development of next generation sequencing, beyond identifying the cause of manifestations that justified prescription of the test, other information with potential interest for patients and their families, defined as secondary findings (SF), can be provided once patients have given informed consent, in particular when therapeutic and preventive options are available. The disclosure of such findings has caused much debate. The aim of this work was to summarize all opinion-based studies focusing on SF, so as to shed light on the concerns that this question generate. A review of the literature was performed, focusing on all PubMed articles reporting qualitative, quantitative or mixed studies that interviewed healthcare providers, participants, or society regarding this subject. The methodology was carefully analysed, in particular whether or not studies made the distinction between actionable and non-actionable SF, in a clinical or research context. From 2010 to 2016, 39 articles were compiled. A total of 14,868 people were interviewed (1259 participants, 6104 healthcare providers, 7505 representatives of society). When actionable and non-actionable SF were distinguished (20 articles), 92% of respondents were keen to have results regarding actionable SF (participants: 88%, healthcare providers: 86%, society: 97%), against 70% (participants: 83%, healthcare providers: 62%, society: 73%) for non-actionable SF. These percentages were slightly lower in the specific situation of children probands. For respondents, the notion of the «patient's choice» is crucial. For healthcare providers, the importance of defining policies for SF among diagnostic lab, learning societies and/or countries is outlined, in particular regarding the content and extension of the list of actionable genes to propose, the modalities of information, and the access to information about adult-onset diseases in minors. However, the existing literature should be taken with caution, since most articles lack a clear definition of SF and actionability, and referred to hypothetical scenarios with limited information to respondents. Studies conducted by multidisciplinary teams involving patients with access to results are sadly lacking, in particular in the medium term after the results have been given. Such studies would feed the debate and make it possible to measure the impact of such findings and their benefit-risk ratio.
Copyright © 2018. Published by Elsevier Masson SAS.

Entities:  

Keywords:  Actionability; Literature review; Opinion based studies; Secondary findings

Mesh:

Year:  2018        PMID: 30165243     DOI: 10.1016/j.ejmg.2018.08.010

Source DB:  PubMed          Journal:  Eur J Med Genet        ISSN: 1769-7212            Impact factor:   2.708


  15 in total

1.  Quantifying Downstream Healthcare Utilization in Studies of Genomic Testing.

Authors:  Zoë P Mackay; Dmitry Dukhovny; Kathryn A Phillips; Alan H Beggs; Robert C Green; Richard B Parad; Kurt D Christensen
Journal:  Value Health       Date:  2020-03-20       Impact factor: 5.725

2.  Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy.

Authors:  Parisima Ghaffarian Zavarzadeh; Morteza Bonyadi; Zahra Abedi
Journal:  Genomics Inform       Date:  2022-09-30

Review 3.  How does the genomic naive public perceive whole genomic testing for health purposes? A scoping review.

Authors:  Isabella A Sherburn; Keri Finlay; Stephanie Best
Journal:  Eur J Hum Genet       Date:  2022-10-19       Impact factor: 5.351

4.  ORCA, a values-based decision aid for selecting additional findings from genomic sequencing in adults: Efficacy results from a randomized trial.

Authors:  Elizabeth G Liles; Michael C Leo; Amanda S Freed; Kathryn M Porter; Jamilyn M Zepp; Tia L Kauffman; Erin Keast; Carmit K McMullen; Inga Gruß; Barbara B Biesecker; Kristin R Muessig; Donna J Eubanks; Laura M Amendola; Michael O Dorschner; Bradley A Rolf; Gail P Jarvik; Katrina A B Goddard; Benjamin S Wilfond
Journal:  Genet Med       Date:  2022-05-06       Impact factor: 8.864

Review 5.  Long overdue: including adults with brain disorders in precision health initiatives.

Authors:  Brenda M Finucane; Scott M Myers; Christa L Martin; David H Ledbetter
Journal:  Curr Opin Genet Dev       Date:  2020-06-13       Impact factor: 5.578

6.  Exome and genome sequencing for pediatric patients with congenital anomalies or intellectual disability: an evidence-based clinical guideline of the American College of Medical Genetics and Genomics (ACMG).

Authors:  Kandamurugu Manickam; Monica R McClain; Laurie A Demmer; Sawona Biswas; Hutton M Kearney; Jennifer Malinowski; Lauren J Massingham; Danny Miller; Timothy W Yu; Fuki M Hisama
Journal:  Genet Med       Date:  2021-07-01       Impact factor: 8.822

7.  Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2021 update: a policy statement of the American College of Medical Genetics and Genomics (ACMG).

Authors:  David T Miller; Kristy Lee; Adam S Gordon; Laura M Amendola; Kathy Adelman; Sherri J Bale; Wendy K Chung; Michael H Gollob; Steven M Harrison; Gail E Herman; Ray E Hershberger; Teri E Klein; Kent McKelvey; C Sue Richards; Christopher N Vlangos; Douglas R Stewart; Michael S Watson; Christa Lese Martin
Journal:  Genet Med       Date:  2021-05-20       Impact factor: 8.822

Review 8.  Bioinformatics Resources for Plant Abiotic Stress Responses: State of the Art and Opportunities in the Fast Evolving -Omics Era.

Authors:  Luca Ambrosino; Chiara Colantuono; Gianfranco Diretto; Alessia Fiore; Maria Luisa Chiusano
Journal:  Plants (Basel)       Date:  2020-05-06

9.  Criteria for reporting incidental findings in clinical exome sequencing - a focus group study on professional practices and perspectives in Belgian genetic centres.

Authors:  Marlies Saelaert; Heidi Mertes; Tania Moerenhout; Elfride De Baere; Ignaas Devisch
Journal:  BMC Med Genomics       Date:  2019-08-20       Impact factor: 3.063

10.  Optimizing clinical exome design and parallel gene-testing for recessive genetic conditions in preconception carrier screening: Translational research genomic data from 14,125 exomes.

Authors:  Antonio Capalbo; Roberto Alonso Valero; Jorge Jimenez-Almazan; Pere Mir Pardo; Marco Fabiani; David Jiménez; Carlos Simon; Julio Martin Rodriguez
Journal:  PLoS Genet       Date:  2019-10-07       Impact factor: 5.917

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