Literature DB >> 30157441

Rapid and Integrative Discovery of Retina Regulatory Molecules.

Nicholas E Albrecht1, Jonathan Alevy1, Danye Jiang1, Courtney A Burger1, Brian I Liu1, Fenge Li1, Julia Wang2, Seon-Young Kim3, Chih-Wei Hsu4, Sowmya Kalaga4, Uchechukwu Udensi4, Chinwe Asomugha4, Ritu Bohat5, Angelina Gaspero5, Monica J Justice6, Peter D Westenskow7, Shinya Yamamoto8, John R Seavitt5, Arthur L Beaudet5, Mary E Dickinson9, Melanie A Samuel10.   

Abstract

Retinal function relies on precisely organized neurons and synapses and a properly patterned vasculature to support them. Alterations in these features can result in vision loss. However, our understanding of retinal organization pathways remains incomplete because of a lack of methods to rapidly identify neuron and vasculature regulators in mammals. Here we developed a pipeline for the identification of neural and synaptic integrity genes by high-throughput retinal screening (INSiGHT) that analyzes candidate expression, vascular patterning, cellular organization, and synaptic arrangement. Using this system, we examined 102 mutant mouse lines and identified 16 unique retinal regulatory genes. Fifteen of these candidates are identified as novel retina regulators, and many (9 of 16) are associated with human neural diseases. These results expand the genetic landscape involved in retinal circuit organization and provide a road map for continued discovery of mammalian retinal regulators and disease-causing alleles.
Copyright © 2018 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  high-throughput screening; nervous system; neural disease; neuron; retina; synapse; vasculature; vision loss

Mesh:

Year:  2018        PMID: 30157441      PMCID: PMC6170014          DOI: 10.1016/j.celrep.2018.07.090

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  49 in total

1.  A family of RIM-binding proteins regulated by alternative splicing: Implications for the genesis of synaptic active zones.

Authors:  Yun Wang; Xinran Liu; Thomas Biederer; Thomas C Südhof
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-21       Impact factor: 11.205

2.  Comprehensive expression atlas of fibroblast growth factors and their receptors generated by a novel robotic in situ hybridization platform.

Authors:  Murat Burak Yaylaoglu; Andrew Titmus; Axel Visel; Gonzalo Alvarez-Bolado; Christina Thaller; Gregor Eichele
Journal:  Dev Dyn       Date:  2005-10       Impact factor: 3.780

Review 3.  Information processing in the primate visual system: an integrated systems perspective.

Authors:  D C Van Essen; C H Anderson; D J Felleman
Journal:  Science       Date:  1992-01-24       Impact factor: 47.728

4.  Satb1 Regulates Contactin 5 to Pattern Dendrites of a Mammalian Retinal Ganglion Cell.

Authors:  Yi-Rong Peng; Nicholas M Tran; Arjun Krishnaswamy; Dimitar Kostadinov; Emily M Martersteck; Joshua R Sanes
Journal:  Neuron       Date:  2017-08-03       Impact factor: 17.173

Review 5.  Eyeing central neurons in vascular growth and reparative angiogenesis.

Authors:  Przemyslaw Sapieha
Journal:  Blood       Date:  2012-06-15       Impact factor: 22.113

6.  Rapid reverse genetic screening using CRISPR in zebrafish.

Authors:  Arish N Shah; Crystal F Davey; Alex C Whitebirch; Adam C Miller; Cecilia B Moens
Journal:  Nat Methods       Date:  2015-04-13       Impact factor: 28.547

7.  Correlation of overexpression of HMGA1 and HMGA2 with poor tumor differentiation, invasion, and proliferation associated with let-7 down-regulation in retinoblastomas.

Authors:  Guoying Mu; Han Liu; Fang Zhou; Xiaoyi Xu; Hua Jiang; Yan Wang; Yi Qu
Journal:  Hum Pathol       Date:  2009-12-11       Impact factor: 3.466

8.  Swm1/Apc13 is an evolutionarily conserved subunit of the anaphase-promoting complex stabilizing the association of Cdc16 and Cdc27.

Authors:  Martin Schwickart; Jan Havlis; Bianca Habermann; Aliona Bogdanova; Alain Camasses; Tobias Oelschlaegel; Andrej Shevchenko; Wolfgang Zachariae
Journal:  Mol Cell Biol       Date:  2004-04       Impact factor: 4.272

Review 9.  The choline transporter-like family SLC44: properties and roles in human diseases.

Authors:  Elisabeth Traiffort; Seana O'Regan; Martial Ruat
Journal:  Mol Aspects Med       Date:  2013 Apr-Jun

10.  Role for Wnt Signaling in Retinal Neuropil Development: Analysis via RNA-Seq and In Vivo Somatic CRISPR Mutagenesis.

Authors:  Sumeet Sarin; Elizabeth Zuniga-Sanchez; Yerbol Z Kurmangaliyev; Henry Cousins; Mili Patel; Jeanette Hernandez; Kelvin X Zhang; Melanie A Samuel; Marta Morey; Joshua R Sanes; S Lawrence Zipursky
Journal:  Neuron       Date:  2018-03-22       Impact factor: 17.173

View more
  8 in total

1.  Progressive myoclonic epilepsy-associated gene Kctd7 regulates retinal neurovascular patterning and function.

Authors:  Jonathan Alevy; Courtney A Burger; Nicholas E Albrecht; Danye Jiang; Melanie A Samuel
Journal:  Neurochem Int       Date:  2019-06-06       Impact factor: 3.921

2.  Vascular morphology and blood flow signatures for differential artery-vein analysis in optical coherence tomography of the retina.

Authors:  Tae-Hoon Kim; David Le; Taeyoon Son; Xincheng Yao
Journal:  Biomed Opt Express       Date:  2020-12-15       Impact factor: 3.732

3.  Spatiotemporal gene expression patterns reveal molecular relatedness between retinal laminae.

Authors:  Danye Jiang; Courtney A Burger; Anna K Casasent; Nicholas E Albrecht; Fenge Li; Melanie A Samuel
Journal:  J Comp Neurol       Date:  2019-10-31       Impact factor: 3.215

4.  Impacts of ciliary neurotrophic factor on the retinal transcriptome in a mouse model of photoreceptor degeneration.

Authors:  Yanjie Wang; Kun-Do Rhee; Matteo Pellegrini; Xian-Jie Yang
Journal:  Sci Rep       Date:  2020-04-20       Impact factor: 4.379

5.  C1q Regulates Horizontal Cell Neurite Confinement in the Outer Retina.

Authors:  Courtney A Burger; Danye Jiang; Fenge Li; Melanie A Samuel
Journal:  Front Neural Circuits       Date:  2020-10-16       Impact factor: 3.492

6.  LKB1 and AMPK instruct cone nuclear position to modify visual function.

Authors:  Courtney A Burger; Nicholas E Albrecht; Danye Jiang; Justine H Liang; Ross A Poché; Melanie A Samuel
Journal:  Cell Rep       Date:  2021-02-02       Impact factor: 9.423

7.  Rapid 3D-STORM imaging of diverse molecular targets in tissue.

Authors:  Nicholas E Albrecht; Danye Jiang; Viktor Akhanov; Robert Hobson; Colenso M Speer; Michael A Robichaux; Melanie A Samuel
Journal:  Cell Rep Methods       Date:  2022-07-11

8.  Distinctive waves of innate immune response in the retina in experimental autoimmune encephalomyelitis.

Authors:  Andrés Cruz-Herranz; Frederike C Oertel; Kicheol Kim; Ester Cantó; Garrett Timmons; Jung H Sin; Michael Devereux; Nicholas Baker; Brady Michel; Ryan D Schubert; Lakshmisahithi Rani; Christian Cordano; Sergio E Baranzini; Ari J Green
Journal:  JCI Insight       Date:  2021-06-08
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.