Literature DB >> 30157275

Molecular epidemiology and clinical features of extended-spectrum beta-lactamase- or carbapenemase-producing Escherichia coli bacteremia in Japan.

Yuko Komatsu1,2, Kei Kasahara1, Takashi Inoue3, Sang-Tae Lee1, Tetsuro Muratani4,5, Hisakazu Yano6, Tadaaki Kirita2, Keiichi Mikasa1.   

Abstract

OBJECTIVES: To identify risk factors and clinical outcomes in patients with bacteremia due to extended-spectrum beta-lactamase (ESBL) or carbapenemase-producing Escherichia coli, as well as to determine the prevalence and genetic background of such isolates.
METHODS: Case control study was performed with patients with E. coli bacteremia between January 2008 and May 2013 (n = 115) at a tertiary university hospital in Japan. Cases had ESBL-producing E. coli (ESBL-EC) whereas controls had non-ESBL-producing E. coli (non-ESBL-EC) isolates. A retrospective chart review was performed to identify risk factors and clinical outcomes. Isolates were characterized by antimicrobial susceptibility testing, polymerase chain reaction analysis for beta-lactamase genes, and multi-locus sequence typing.
RESULTS: Of 115 unique cases of E. coli bacteremia, 30 (26.1%) were due to ESBL-EC and three (2.6%) were due to carbapenemase-producing E. coli. All three carbapenemase-producing E. coli isolates were IMP-6 and concurrently produced ESBL (ESBL/IMP-6-EC). ESBL-EC isolates showed multidrug resistance. Of the ESBL-EC isolates, CTX-M-27 was the most prevalent (33.3%), followed by CTX-M-14 (30%). Multi-locus sequence typing revealed that 19 (63.3%) isolates were ST131. The multivariate analysis identified nursing home-associated infections and antibiotic administration in the preceding 30 days as risk factors for ESBL-EC bacteremia. The 14-day mortality non-ESBL-EC, ESBL-EC, and ESBL/IMP-6-EC was 4.7% (4/85), 20% (6/30), and 66.7% (2/3), respectively.
CONCLUSIONS: CTX-M-27, CTX-M-14, and ST131 were the most prevalent ESBL-EC isolates from bacteremic patients in a Japanese hospital. Further studies with larger sample sizes are warranted to investigate the clinical significance of ESBL-EC and ESBL/IMP-6-EC.

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Year:  2018        PMID: 30157275      PMCID: PMC6114719          DOI: 10.1371/journal.pone.0202276

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


Introduction

Escherichia coli is a common commensal organism in the intestinal tracts of humans and animals; it causes a wide range of diseases. Resistance against various antimicrobials, including the cephalosporins, fluoroquinolones, and even the carbapenems, is increasing worldwide [1]. The genetic background of such resistance has been extensively studied and varies according to geographic location and time. The E. coli sequence type (ST) 131 C2/H30Rx clade with the blaCTX-M-15 gene is largely responsible for the global dissemination of extended-spectrum beta-lactamase-producing E. coli (ESBL-EC) [2]. In Japan, Matsumura et al. evaluated cases of bacteremia due to ESBL-EC between 2005 and 2010 and found the blaCTX-M-14 gene to be the most common, followed by blaCTX-M-15 and blaCTX-M-2 [3]. They recently reported on the global emergence and increased prevalence of the E. coli ST131 clade with the blaCTX-M-27 gene, named the C1-M27 clade [4]. Class A carbapenemases such as Klebsiella pneumoniae carbapenemase (KPC), and class B metallo-beta-lactamases such as the New Delhi Metallo-beta-lactamase (NDM), are a problem worldwide; however, these are rarely found in Japan where other types of metallo-beta-lactamases, such as IMP-6, are dominant [5, 6]. Although the incidence is low, Yamamoto et al. recently reported that 14.9% of long-term hospitalized patients harbored carbapenem-resistant Enterobacteriaceae, 95.7% of which produced IMP-6 [7-9]. The clinical impact of IMP-6-producing organisms has not yet been reported. In this study, we aimed to identify the prevalence and genes associated with ESBL-EC and carbapenemase-producing E. coli, as well as to identify the risk factors and outcomes of patients with bacteremia caused by these organisms.

Materials and methods

Study setting and study design

This study was conducted at Nara Medical University, a tertiary care hospital with 927 beds in Nara prefecture, located in central Japan. All patients aged 18 years or older with at least one positive blood culture for E. coli between January 1, 2008, and May 31, 2013, were identified via the clinical microbiology laboratory’s computerized database. A case-control study design was used to determine risk factors for the ESBL-EC bacteremia group. The case group comprised patients with ESBL-EC bacteremia and the control group comprised patients with non-ESBL-EC bacteremia. Only the first episode of bacteremia was included for each patient. Ethical approval was obtained from the Institutional Review Board of Nara Medical University (No. 802).

Microbiological analysis

The clinical microbiology laboratory used the BacT/Alert 3D blood culture system (Sysmex bioMérieux, Tokyo, Japan) and identification of bacterial isolates was performed using the VITEK® 2 system (Sysmex bioMérieux, Tokyo, Japan). The minimum inhibitory concentration of various antimicrobial agents was determined using the agar dilution method and was interpreted according to the Clinical and Laboratory Standards Institute’s (CLSI) guidelines [10]. Isolates were reported as being susceptible to flomoxef at a minimum inhibitory concentration of ≤ 8 μg/mL, in reference to the CLSI breakpoint for moxalactam (≤ 8 μg/mL). Screening for ESBL production was performed using the VITEK® 2 Advanced Expert System according to the manufacturer instructions; ESBL production was confirmed using the combined disk test according to CLSI guidelines [10]. Bacterial DNA was isolated using the QIAamp DNA Mini kit (Qiagen, Hilden, Germany). Polymerase chain reaction analyses for the detection of TEM-, SHV-, CTX-M-type beta-lactamase genes, and plasmid-mediated AmpC beta-lactamases (p-AmpC) were performed as previously described [11, 12]. Isolates displaying non-susceptibility to imipenem or meropenem (minimum inhibitory concentration > 1 μg/mL) were analyzed to determine the presence of carbapenemases, using primers as previously described [6].

Clinical analysis

Bacteremia was categorized as nosocomial, healthcare-associated, or community acquired, in accordance with the criteria set out by Friedman et al Nursing home-associated infections comprised those occurring in patients residing in nursing homes or who attended day care within 30 days of the onset of bacteremia [13]. The Charlson comorbidity index was used to categorize comorbid conditions, identified by reviewing the patients’ medical charts [14]. Other clinical information included age; sex; date of onset of nosocomial infection; whether antibiotic agents, general anesthesia, chemotherapy, radiation therapy, or immunosuppressive agents such as glucocorticoids were administered within 30 days of the date of onset of bacteremia; intensive care unit admission at the time of bacteremia; source of infection (urinary tract, intra-abdominal, catheter-associated, soft-tissue, pneumonia, or unknown); presence of indwelling devices (peripheral or central venous catheters, urinary catheter, drainage tube(s), nasogastric tube, tracheotomy tube, and devices related to oxygen inhalation, mechanical ventilation, or continuous hemodiafiltration). Inappropriate antimicrobial treatment was defined as the use of an antimicrobial agent to which the pathogen being treated is resistant.

Statistical analysis

The statistical analysis was performed using Stata software version 13 (Stata Corporation College Station, TX, USA). For the univariate statistical analysis of dichotomous outcomes, Fisher’s exact test and logistic regression analysis were used to compare categorical and continuous explanatory variables, respectively. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated to determine the strength of any associations that emerged. P values < .05 were considered statistically significant, and all probabilities were two-tailed. In the risk factor analysis for ESBL-EC bacteremia, multivariate logistic regression analysis was performed with nosocomial infection, nursing home-associated infection, and used antibiotic(s) within 30 days. It was thought that nosocomial and nursing home-associated infection might be associated with ESBL-producing organism acquisition while the last factor (used antibiotic(s) within 30 days) may be associated with ESBL-producing organisms’ selection. These factors have been shown to be clinically significant variables of ESBL-producing organisms in previous studies [15-17]. The number of variables included in the multivariate analysis was restricted to 10% of the number of ESBL-producing isolates [18]. In the risk factor analysis for 14-day mortality, a multivariate analysis could not be performed because there were only ten deaths.

Results

Microbiology results

During the study period, there were 115 unique cases of bacteremia caused by E. coli: 30 (26.1%) were due to ESBL-EC and 85 (73.9%) were due to non-ESBL-EC. The antibiotic susceptibility patterns of all isolates are shown in Table 1. Among the cases, a high proportion was resistant to piperacillin-tazobactam, cefmetazole, gentamicin, tobramycin, levofloxacin, ciprofloxacin, and trimethoprim-sulfamethoxazole. Notably, 83.3% of cases were resistant to ciprofloxacin and 50% were resistant to trimethoprim-sulfamethoxazole, compared with 15.3% and 17.6% of controls, respectively.
Table 1

Antimicrobial resistance of ESBL-EC and non-ESBL-EC isolates.

Antimicrobial agentESBL-EC (n = 30)Non-ESBL-EC (n = 85)P value
Piperacillin-tazobactam5 (16.7)1 (1.2).005
Cefmetazole5 (16.7)2 (2.4).01
Flomoxef1 (3.3)1 (1.2).46
Imipenem1 (3.3)0.26
Meropenem1 (3.3)0.26
Gentamicin12 (40)5 (5.9)< .001
Tobramycin12 (40)5 (5.9)< .001
Amikacin1 (3.3)0.26
Levofloxacin24 (80)14 (16.5)< .001
Ciprofloxacin25 (83.3)13 (15.3)< .001
Fosfomycin*03 (3.5).57
Trimethoprim-sulfamethoxazole15 (50)15 (17.6)< .001

Data are presented as n (%). ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli.

* Clinical Laboratory Standards Institute breakpoint is available for urine isolates only.

Data are presented as n (%). ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli. * Clinical Laboratory Standards Institute breakpoint is available for urine isolates only. The ST and distribution of antimicrobial resistance genes of the ESBL-EC isolates are shown in Table 2. CTX-M-27 was most prevalent, followed by CTX-M-14. Three isolates possessed both CTX-M (two CTX-M-2 and one CTX-M-27) and IMP-6 genes. ST131 was the most prevalent ST (19/30, 63.3%). CTX-M-27 (8/19, 42.1%) and CTX-M-14 (5/19, 26.3%) were the most common ESBL-associated genes. Two of the three CTX-M+IMP-6 isolates were ST131.
Table 2

Distribution of ESBL-EC antimicrobial resistance genes and sequence types.

Genotype (n = 30 cases)Number (%) of isolatesMLST (number of isolates)
CTX-M-2710 (33.3)ST131 (8), ST2179 (1), ST2750 (1)
CTX-M-147 (23.3)ST131 (5), ST62 (1), ST405 (1)
CTX-M-2 &IMP-62 (6.7)ST131 (1), ST2750 (1)
CTX-M-22 (6.7)ST131 (2)
CTX-M-14 & CMY-22 (6.7)ST95 (1), ST648 (1)
SHV-121 (3.3)ST362 (1)
Novel CTX-Ma1 (3.3)ST648 (1)
CTX-M-611 (3.3)ST131 (1)
CTX-M-27 & IPM-61 (3.3)ST131 (1)
CTX-M-191 (3.3)ST131 (1)
CTX-M-152 (3.3)ST847 (1), ST2179 (1)

MLST, multi-locus sequence typing; ESBL-EC, extended-spectrum beta-lactamase producing E. coli.

a GenBank accession number: KY964289

MLST, multi-locus sequence typing; ESBL-EC, extended-spectrum beta-lactamase producing E. coli. a GenBank accession number: KY964289

Clinical results

The patients’ demographic characteristics and risk factors for ESBL-EC bacteremia are listed in Table 3. The following variables were identified as risk factors for ESBL-EC bacteremia in the univariable analysis: younger age; community-onset, nosocomial, and nursing home-associated infections; administration of antibiotic, general anesthetic, or immunosuppressive agents within 30 days of bacteremia onset; connective tissue disease, paraplegia or hemiplegia, dementia, and leukemia; a higher Charlson comorbidity index; and urinary or central venous catheterization. In the multivariate analysis, nursing home-associated infection (OR, 7.98; 95% CI, 1.56–40.9) and antibiotic administration within the preceding 30 days (OR, 5.11; 95% CI, 1.61–16.2) were independent risk factors for ESBL-EC bacteremia; however nosocomial infection (OR, 1.28; 95% CI, 0.4–4.17) was not. We quantified the severity of multicollinearity among the predictor variables in the regression analysis by calculating the variance inflation factor (VIF). The VIF values were 1.48, 1.05, and 1.44 for nosocomial and nursing home-associated infections, and used antibiotics within 30 days, respectively. The fact that these variables were sufficiently smaller than 5.0 means that each predictor variable was uncorrelated with the other predictors and the multicollinearity among them was vanishingly small.
Table 3

Univariate and multivariate analysis of risk factors associated with ESBL-EC compared with non-ESBL-EC isolates in bacteremic patients.

VariableESBL-ECNon-ESBL-ECUnivariate analysisMultivariate analysis
(n = 30)(n = 85)OR (95% CI)P valueOR (95% CI)P value
Age, mean (SD), y66.5 (17.2)72.3 (10.8)0.97 (0.94–1.00).04
Sex: male19372.22 (0.88–5.87).09
Healthcare-associated infection9310.75 (0.27–1.97).66
Nosocomial infection21402.63 (1.00–7.25).041.28 (0.40–4.17).678
Nursing home-associated infection636.69 (1.31–44.50).0097.98 (1.56–40.9).013
Days to onset of nosocomial infection, median (IQR)24 (15–79)28 (12–50)1.00 (0.99–1.01).63
Used antibiotic(s) within 30 days22285.51 (2.05–16.22)< .0015.11 (1.61–16.2).006
General anesthesia within 30 days763.94 (1.02–15.8).04
Chemotherapy within 30 days2110.48 (0.05–2.43).51
Radiation within 30 days130.94 (0.02–12.29)>.99
Immunosuppressants within 30 days14212.64 (1.01–6.93).04
Intensive care unit admission before infection8102.70 (0.82–8.70).08
Source of infection:
 Urinary tract13490.56 (0.22–1.41).20
 Intra-abdominal10221.43 (0.51–3.81).48
 Catheter-associated222.93 (0.20–42.2).28
 Soft-tissue112.86 (0.04–229.6).46
 Pneumonia040 (0–4.32).57
 Unknown471.71 (0.34–7.37).47
Comorbid condition(s):
 Malignancy11380.72 (0.27–1.82).52
 Diabetes mellitus8191.26 (0.42–3.56).63
 Connective tissue disease738.12 (1.69–52.53).003
 Cerebral vascular disease591.68 (0.40–6.23).52
 Peripheral vascular disease342.23 (0.31–14.12).37
 Paraplegia or hemiplegia6210.11 (1.67–108.70).004
 Dementia6120.3 (2.30–971.50).001
 Cardiovascular disease5150.93 (0.24–3.08)>.99
 Chronic liver disease4130.85 (0.19–3.10)>.99
 Renal insufficiency4130.85 (0.19–3.10)>.99
 Chronic pulmonary disease581.91 (0.45–7.37).32
 Leukemia40Inf (1.99–Inf).004
 Lymphoma222.93 (0.20–42.19).28
 Peptic ulcer20Inf (0.54–Inf).07
Charlson comorbidity index, mean (SD)4.2 (2.2)2.7 (2.1)1.34 (1.11–1.62).003
Charlson comorbidity index >221333.63 (1.39–10.18).005
Indwelling devices:
 Peripheral catheterization10171.99 (0.70–5.50).21
 Urinary catheterization10113.32 (1.10–10.07).03
 Oxygen inhalation7112.05 (0.60–6.56).24
 Central venous catheter746.04 (1.39–30.70).007
 Drainage tube260.94 (0.09–5.66)>.99
 Tracheotomy tube222.93 (0.20–42.19).28
 Nasogastric tube222.93 (0.20–42.19).28
 Mechanical ventilation222.963(0.20–42.19).28
 Continuous hemodiafiltration112.86 (0.04–229.6).46

ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli; OR, odds ratio; CI, confidential interval; IQR, interquartile range; SD, standard deviation; CCI, Charlson comorbidity index; Inf, infinity.

ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli; OR, odds ratio; CI, confidential interval; IQR, interquartile range; SD, standard deviation; CCI, Charlson comorbidity index; Inf, infinity. Overall, 14 day-mortality was 8.7% (10/115) with 4.7% (4/85) for non-ESBL-EC, 14.8% (4/27) for ESBL-only-EC, 20% (6/30) for ESBL-EC, and 66.7% (2/3) for ESBL/IMP-6-EC. Table 4 shows the results of the univariate analysis of 14-day mortality. Multiple factors, such as the use of inadequate antibiotic therapy within 24 hours; prior use of any antibiotic and specifically of any carbapenem; infection arising from the urinary tract, soft-tissue, or an unknown source; chronic liver disease; central venous catheterization; presence of a nasogastric tube; mechanical ventilation; ESBL-EC and ESBL/IMP-6-EC were also significantly associated with 14-day mortality.
Table 4

Univariate analysis of risk factors for all-cause mortality within 14 days after onset of bacteremia due to E. coli.

VariablesSurvived (n = 105)Died (n = 10)OR95% CIP value
Sex: male5061.530.43–5.41.51
Intensive care unit after infection1742.910.82–10.33.08
Inadequate antibiotic therapy within 24 h959.112.63–31.55< .001
Community-onset infection5130.550.14–2.15.38
Healthcare-associated infection3820.530.11–2.48.41
Nosocomial infection5471.800.47–6.99.38
Nursing home-associated infection722.800.59–13.19.17
Antibiotic(s) used within 30 days:
 Any antibiotic41910.931.38–86.3.004
 Any carbapenem1156.181.79–21.4< .001
 Any quinolone711.520.19–12.0.69
Immunosuppressant used within 30 days3052.180.63–7.52.21
General anesthesia within 30 days1210.790.10–6.22.82
Chemotherapy within 30 days1121.840.39–8.68.43
Radiation within 30 days40<0.0010–Inf.52
Intensive care unit admission1621.210.26–5.68.81
Source of infection:
 Urinary tract6020.210.046–1.01.03
 Intra-abdominal2841.710.48–6.05.40
 Catheter-associated40<0.0010–Inf.52
 Soft-tissue118.211.03–65.3.02
 Pneumonia40<0.0010–Inf.52
 Unknown834.391.13–17.0.02
Comorbid condition(s):
 Malignancy4540.860.24–3.04.81
 Diabetes mellitus2520.830.18–3.9.81
 Connective tissue disease911.070.14–8.45.95
 Cerebrovascular disease1221.950.41–9.19.39
 Peripheral vascular disease70<0.0010–Inf.39
 Paraplegia or hemiplegia711.200.43–3.36.73
 Dementia70<0.0010–Inf.39
 Cardiovascular disease1910.540.068–4.26.55
 Chronic liver disease1256.261.81–21.7< .001
 Renal insufficiency1521.460.31–6.86.63
 Chronic pulmonary disease1122.100.45–9.89.34
 Leukemia313.550.45–28.0.20
 Lymphoma40<0.0010–Inf.52
 Peptic ulcer20<0.0010–Inf.65
Indwelling device:
 Peripheral catheter2520.740.16–3.50.70
 Urinary catheter1742.780.78–9.85.10
 Oxygen inhalation1532.150.56–8.31.25
 Central venous catheter834.181.08–16.18.02
 Drainage tube623.160.67–14.87.12
 Tracheotomy tube226.501.38–30.61.006
 Nasogastric tube1313.173.39–51.14< .001
 Mechanical ventilation226.501.38–30.61< .001
 Continuous hemodiafiltration115.540.70–43.7.07
Empiric treatment with a carbapenem4361.890.53–6.70.31
Carbapenem use after susceptibility test6640.360.10–1.27.09
Carbapenem use6860.710.20–2.51.59
Age ≥ 65 years8560.360.10–1.28.10
Charlson comorbidity score of > 24772.620.68–10.12.15
Age, mean years (SD)71.4 (12.1)64.1 (19.5)0.970.93–1.01.10
Charlson comorbidity index, mean (SD)4.3 (3.1)3.0 (2.1)1.260.97–1.62.08
ESBL-only-EC2342.360.45–10.94.24
ESBL-EC2464.971.08–26.01.02
ESBL/IMP-6-EC1224.171.15–1527.7.02

OR, odds ratio; CI, confidential interval; SD, standard deviation; ESBL-only-EC, extended-spectrum beta-lactamase-producing only E. coli; ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli

OR, odds ratio; CI, confidential interval; SD, standard deviation; ESBL-only-EC, extended-spectrum beta-lactamase-producing only E. coli; ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli

Discussion

Worldwide, the prevalence of ESBL-EC has varied widely and is increasing. Matsumura et al. found that 13.9% of 706 cases of E. coli bacteremia occurring from 2005–2012 were due to ESBL-producing strains, while Namikawa et al. recently reported that 24.0% of 129 cases of E. coli bacteremia from 2011–2015 were due to ESBL-EC [3, 19]. In our study, a total of 115 unique cases of E. coli bacteremia were identified and, of these, 30 (26.1%) were caused by ESBL-EC. The proportion of carbapenemase-producing E. coli was 2.6%, and all cases produced IMP-6. The prevalence of carbapenemase-producing E. coli among all cases of E. coli bacteremia in Japan has not previously been reported. In a recent analysis of 4875 Enterobacteriaceae isolates collected in Japan between 2010 and 2013, Ohno et al. reported that the prevalence of IMP-6-producing strains ranged from 0.08% to 0.92%, depending on the species and biologic specimen from which the isolates were cultured [20]. Because IMP-6-producing isolates typically exhibit low-level resistance to the carbapenems, they are often overlooked; however, it is important that these strains be continuously monitored using highly sensitive tests [6]. Multilocus sequence typing revealed that 19 of the 30 ESBL-EC isolates (63.3%) were ST131. The global increase in ESBL-EC is associated with a pandemic clonal group known as ST131 that includes CTX-M-type-producing ESBLs [6]. It is known that ST131 E. coli sequentially acquires antimicrobial resistance genes and develops resistance to multiple classes of antibiotics, including aminoglycosides, fluoroquinolones, and sulfamethoxazole-trimethoprim [2]. This could explain the high rates of multi-class antibiotic resistance among the ESBL-EC isolates in our study. Matsumura et al. recently reported an increase in CTX-M-27-producing ST131 isolates in Japan, named C1-M27 [4]. A third of our ESBL isolates produced CTX-M-27, and 80% of these were ST131. The second most prevalent CTX-M was CTX-M-14, 71% of which were ST131. Of 115 isolates, three (2.6%) produced both IMP-6 and either CTX-M-2 or CTX-M-27; and two were ST131. E. coli strains producing both IMP-6 and CTX-M-2 have been reported, although this is the first study to report an E. coli isolate producing both IMP-6 and CTX-M-27 [21]. This finding alerts us to the future risk that C1-M27 might acquire higher-level antimicrobial resistance genes, such as carbapenemase-resistance genes. As reported, many factors are associated with infection or colonization by ESBL-EC [6, 7, 9, 10, 19, 20, 22–24]. By comparing ESBL-EC bacteremia and non ESBL-EC bacteremia, we identified risk factors of ESBL-EC in patients with EC bacteremia. At univariate analysis, multiple factors were found to be associated with ESBL-EC; however, at multivariate analysis, we chose three representative risk factors due to sample size constraints. These three factors were traditionally regarded as being important for the isolation of multidrug resistant organisms [15-17]. Historically, multidrug resistant organisms are isolated from severely ill, hospitalized patients in intensive care [23]. However, community acquired ESBL-EC infection is reported to be as important as nosocomial ESBL-EC infection [25]. From this perspective, it is interesting that nosocomial infection was not a significant risk factor for ESBL-EC bacteremia at multivariate analysis. On the other hand, it has been reported that residents in nursing homes have high risk of carriage of ESBL-EC [24, 26]. Our result is consistent with these reports in that nursing home-associated infection was significantly associated with ESBL-EC bacteremia. Finally, exposure to antibiotics has been reported as the most significant risk factor in many studies [1, 5, 9, 15–17, 19, 24, 26]. Antibiotic exposure is associated with multidrug resistant organisms, not only by inducing mutations associated with antibiotic resistance, but also by selecting resistant organisms; which is called selection pressure. In our study, antibiotic exposure within 30 days was a significant risk factor for ESBL-EC bacteremia. A number of studies found no significant association between ESBL production and crude mortality [15–17, 19]. Conversely, several other studies observed that patients with infection due to antibiotic-resistant organisms tended to have poorer outcomes [22, 27]. Inappropriate empiric treatment, frequently observed in antibiotic-resistant E. coli infection, is the main determinant of mortality. Again, due to sample size constraints, we performed only univariate analysis, revealing multiple significant risk factors of death. Patients with ESBL-EC bacteremia and ESBL/IMP-6-EC bacteremia may have poorer prognosis; however, there is need for further study to appropriately identify the risk factors of death. There are some limitations to our study. First, it involved a single center; hence, the generalizability of our results to other settings may not be feasible. Second, the limited number of patients prevented us from performing a more detailed statistical analysis. The difference in mortality among non-ESBL-EC, ESBL-EC, and ESBL/IMP-6-EC cannot be attributed to the presence of resistance. For the aim to identify clinically relevant risk factors of resistance and mortality, a multicenter study with a larger study population is warranted. In conclusion, of 115 unique bloodstream infections caused by E. coli, 30 (26.1%) were caused by ESBL-EC and three (2.6%) by carbapenemase-producing E. coli. All carbapenemase-producing E. coli were IMP-6-producing strains that also produced ESBLs. Among the ESBL-EC, 33.3% possessed CTX-M-27 and 30% harbored CTX-M-14. Nineteen (63.3%) were ST131. Nursing home-associated infections and administration of antibiotic agents within the previous 30 days were associated with ESBL-EC bacteremia. Overall, 14 day-mortality was 8.7% (10/115) with 4.7% (4/85) for non-ESBL-EC, 14.8% (4/27) for ESBL-only-EC, 20% (6/30) for ESBL-EC, and 66.7% (2/3) for ESBL/IMP-6-EC; however, the sample size in this study was not sufficient to evaluate the clinical impact on mortality, and further studies with larger sample sizes are warranted.
  26 in total

1.  Detection of plasmid-mediated AmpC beta-lactamase genes in clinical isolates by using multiplex PCR.

Authors:  F Javier Pérez-Pérez; Nancy D Hanson
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

2.  Emergence in Japan of an imipenem-susceptible, meropenem-resistant Klebsiella pneumoniae carrying blaIMP-6.

Authors:  Norifumi Shigemoto; Ryuichi Kuwahara; Shizuo Kayama; Wataru Shimizu; Makoto Onodera; Michiya Yokozaki; Junzo Hisatsune; Fuminori Kato; Hiroki Ohge; Motoyuki Sugai
Journal:  Diagn Microbiol Infect Dis       Date:  2011-11-10       Impact factor: 2.803

3.  Mortality and delay in effective therapy associated with extended-spectrum beta-lactamase production in Enterobacteriaceae bacteraemia: a systematic review and meta-analysis.

Authors:  Mitchell J Schwaber; Yehuda Carmeli
Journal:  J Antimicrob Chemother       Date:  2007-09-11       Impact factor: 5.790

4.  Extensive dissemination of extended spectrum β-lactamase-producing Enterobacteriaceae in a Dutch nursing home.

Authors:  Ina Willemsen; Jolande Nelson; Yvonne Hendriks; Ans Mulders; Sandrien Verhoeff; Paul Mulder; Robert Roosendaal; Kim van der Zwaluw; Carlo Verhulst; Marjolein Kluytmans-van den Bergh; Jan Kluytmans
Journal:  Infect Control Hosp Epidemiol       Date:  2015-04       Impact factor: 3.254

Review 5.  Carbapenem-resistant Enterobacteriaceae: epidemiology and prevention.

Authors:  Neil Gupta; Brandi M Limbago; Jean B Patel; Alexander J Kallen
Journal:  Clin Infect Dis       Date:  2011-07-01       Impact factor: 9.079

6.  Molecular and clinical characterization of plasmid-mediated AmpC β-lactamase-producing Escherichia coli bacteraemia: a comparison with extended-spectrum β-lactamase-producing and non-resistant E. coli bacteraemia.

Authors:  Y Matsumura; M Nagao; M Iguchi; T Yagi; T Komori; N Fujita; M Yamamoto; A Matsushima; S Takakura; S Ichiyama
Journal:  Clin Microbiol Infect       Date:  2012-02-14       Impact factor: 8.067

7.  Treatment outcome of bacteremia due to KPC-producing Klebsiella pneumoniae: superiority of combination antimicrobial regimens.

Authors:  Zubair A Qureshi; David L Paterson; Brian A Potoski; Mary C Kilayko; Gabriel Sandovsky; Emilia Sordillo; Bruce Polsky; Jennifer M Adams-Haduch; Yohei Doi
Journal:  Antimicrob Agents Chemother       Date:  2012-01-17       Impact factor: 5.191

Review 8.  ESCMID guidelines for the management of the infection control measures to reduce transmission of multidrug-resistant Gram-negative bacteria in hospitalized patients.

Authors:  E Tacconelli; M A Cataldo; S J Dancer; G De Angelis; M Falcone; U Frank; G Kahlmeter; A Pan; N Petrosillo; J Rodríguez-Baño; N Singh; M Venditti; D S Yokoe; B Cookson
Journal:  Clin Microbiol Infect       Date:  2014-01       Impact factor: 8.067

9.  Global Escherichia coli Sequence Type 131 Clade with blaCTX-M-27 Gene.

Authors:  Yasufumi Matsumura; Johann D D Pitout; Ryota Gomi; Tomonari Matsuda; Taro Noguchi; Masaki Yamamoto; Gisele Peirano; Rebekah DeVinney; Patricia A Bradford; Mary R Motyl; Michio Tanaka; Miki Nagao; Shunji Takakura; Satoshi Ichiyama
Journal:  Emerg Infect Dis       Date:  2016-11       Impact factor: 6.883

10.  Molecular characteristics of extended-spectrum β-lactamases in clinical isolates from Escherichia coli at a Japanese tertiary hospital.

Authors:  Hisakazu Yano; Mina Uemura; Shiro Endo; Hajime Kanamori; Shinya Inomata; Risako Kakuta; Sadahiro Ichimura; Miho Ogawa; Masahiro Shimojima; Noriomi Ishibashi; Tetsuji Aoyagi; Masumitsu Hatta; Yoshiaki Gu; Mitsuhiro Yamada; Koichi Tokuda; Hiroyuki Kunishima; Miho Kitagawa; Yoichi Hirakata; Mitsuo Kaku
Journal:  PLoS One       Date:  2013-05-15       Impact factor: 3.240

View more
  8 in total

Review 1.  Adverse clinical outcomes associated with infections by Enterobacterales producing ESBL (ESBL-E): a systematic review and meta-analysis.

Authors:  Weiping Ling; Luis Furuya-Kanamori; Yukiko Ezure; Patrick N A Harris; David L Paterson
Journal:  JAC Antimicrob Resist       Date:  2021-06-02

Review 2.  Evaluation of the health and healthcare system burden due to antimicrobial-resistant Escherichia coli infections in humans: a systematic review and meta-analysis.

Authors:  M C MacKinnon; J M Sargeant; D L Pearl; R J Reid-Smith; C A Carson; E J Parmley; S A McEwen
Journal:  Antimicrob Resist Infect Control       Date:  2020-12-10       Impact factor: 4.887

3.  Drug susceptibility and molecular epidemiology of Escherichia coli in bloodstream infections in Shanxi, China.

Authors:  Yanjun Zhang; Hairu Wang; Yanfang Li; Yabin Hou; Chonghua Hao
Journal:  PeerJ       Date:  2021-10-25       Impact factor: 2.984

4.  Molecular Epidemiology of Extended-Spectrum Beta-Lactamase and AmpC Producing Enterobacteriaceae among Sepsis Patients in Ethiopia: A Prospective Multicenter Study.

Authors:  Melese Hailu Legese; Daniel Asrat; Abraham Aseffa; Badrul Hasan; Adane Mihret; Göte Swedberg
Journal:  Antibiotics (Basel)       Date:  2022-01-19

5.  Variation of effect estimates in the analysis of mortality and length of hospital stay in patients with infections caused by bacteria-producing extended-spectrum beta-lactamases: a systematic review and meta-analysis.

Authors:  Parichehr Shamsrizi; Beryl Primrose Gladstone; Elena Carrara; Dora Luise; Andrea Cona; Chiara Bovo; Evelina Tacconelli
Journal:  BMJ Open       Date:  2020-01-20       Impact factor: 2.692

6.  Change in the Antimicrobial Resistance Profile of Extended-Spectrum β-Lactamase-Producing Escherichia coli.

Authors:  Motoyasu Miyazaki; Yota Yamada; Koichi Matsuo; Yukie Komiya; Masanobu Uchiyama; Nobuhiko Nagata; Tohru Takata; Shiro Jimi; Osamu Imakyure
Journal:  J Clin Med Res       Date:  2019-09-01

7.  Mortality in Escherichia coli bloodstream infections: a multinational population-based cohort study.

Authors:  Melissa C MacKinnon; Scott A McEwen; David L Pearl; Outi Lyytikäinen; Gunnar Jacobsson; Peter Collignon; Daniel B Gregson; Louis Valiquette; Kevin B Laupland
Journal:  BMC Infect Dis       Date:  2021-06-25       Impact factor: 3.090

8.  Distribution of Extended-Spectrum β-Lactamase Genes and Antimicrobial Susceptibility among Residents in Geriatric Long-Term Care Facilities in Japan.

Authors:  Dai Akine; Teppei Sasahara; Kotaro Kiga; Ryusuke Ae; Koki Kosami; Akio Yoshimura; Yoshinari Kubota; Kazumasa Sasaki; Yumiko Kimura; Masanori Ogawa; Shinya Watanabe; Yuji Morisawa; Longzhu Cui
Journal:  Antibiotics (Basel)       Date:  2021-12-29
  8 in total

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