| Literature DB >> 30157275 |
Yuko Komatsu1,2, Kei Kasahara1, Takashi Inoue3, Sang-Tae Lee1, Tetsuro Muratani4,5, Hisakazu Yano6, Tadaaki Kirita2, Keiichi Mikasa1.
Abstract
OBJECTIVES: To identify risk factors and clinical outcomes in patients with bacteremia due to extended-spectrum beta-lactamase (ESBL) or carbapenemase-producing Escherichia coli, as well as to determine the prevalence and genetic background of such isolates.Entities:
Mesh:
Substances:
Year: 2018 PMID: 30157275 PMCID: PMC6114719 DOI: 10.1371/journal.pone.0202276
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Antimicrobial resistance of ESBL-EC and non-ESBL-EC isolates.
| Antimicrobial agent | ESBL-EC (n = 30) | Non-ESBL-EC (n = 85) | |
|---|---|---|---|
| Piperacillin-tazobactam | 5 (16.7) | 1 (1.2) | .005 |
| Cefmetazole | 5 (16.7) | 2 (2.4) | .01 |
| Flomoxef | 1 (3.3) | 1 (1.2) | .46 |
| Imipenem | 1 (3.3) | 0 | .26 |
| Meropenem | 1 (3.3) | 0 | .26 |
| Gentamicin | 12 (40) | 5 (5.9) | < .001 |
| Tobramycin | 12 (40) | 5 (5.9) | < .001 |
| Amikacin | 1 (3.3) | 0 | .26 |
| Levofloxacin | 24 (80) | 14 (16.5) | < .001 |
| Ciprofloxacin | 25 (83.3) | 13 (15.3) | < .001 |
| Fosfomycin | 0 | 3 (3.5) | .57 |
| Trimethoprim-sulfamethoxazole | 15 (50) | 15 (17.6) | < .001 |
Data are presented as n (%). ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli.
* Clinical Laboratory Standards Institute breakpoint is available for urine isolates only.
Distribution of ESBL-EC antimicrobial resistance genes and sequence types.
| Genotype (n = 30 cases) | Number (%) of isolates | MLST (number of isolates) |
|---|---|---|
| CTX-M-27 | 10 (33.3) | ST131 (8), ST2179 (1), ST2750 (1) |
| CTX-M-14 | 7 (23.3) | ST131 (5), ST62 (1), ST405 (1) |
| CTX-M-2 &IMP-6 | 2 (6.7) | ST131 (1), ST2750 (1) |
| CTX-M-2 | 2 (6.7) | ST131 (2) |
| CTX-M-14 & CMY-2 | 2 (6.7) | ST95 (1), ST648 (1) |
| SHV-12 | 1 (3.3) | ST362 (1) |
| Novel CTX-M | 1 (3.3) | ST648 (1) |
| CTX-M-61 | 1 (3.3) | ST131 (1) |
| CTX-M-27 & IPM-6 | 1 (3.3) | ST131 (1) |
| CTX-M-19 | 1 (3.3) | ST131 (1) |
| CTX-M-15 | 2 (3.3) | ST847 (1), ST2179 (1) |
MLST, multi-locus sequence typing; ESBL-EC, extended-spectrum beta-lactamase producing E. coli.
a GenBank accession number: KY964289
Univariate and multivariate analysis of risk factors associated with ESBL-EC compared with non-ESBL-EC isolates in bacteremic patients.
| Variable | ESBL-EC | Non-ESBL-EC | Univariate analysis | Multivariate analysis | ||
|---|---|---|---|---|---|---|
| (n = 30) | (n = 85) | OR (95% CI) | OR (95% CI) | |||
| Age, mean (SD), y | 66.5 (17.2) | 72.3 (10.8) | 0.97 (0.94–1.00) | .04 | ||
| Sex: male | 19 | 37 | 2.22 (0.88–5.87) | .09 | ||
| Healthcare-associated infection | 9 | 31 | 0.75 (0.27–1.97) | .66 | ||
| Nosocomial infection | 21 | 40 | 2.63 (1.00–7.25) | .04 | 1.28 (0.40–4.17) | .678 |
| Nursing home-associated infection | 6 | 3 | 6.69 (1.31–44.50) | .009 | 7.98 (1.56–40.9) | .013 |
| Days to onset of nosocomial infection, median (IQR) | 24 (15–79) | 28 (12–50) | 1.00 (0.99–1.01) | .63 | ||
| Used antibiotic(s) within 30 days | 22 | 28 | 5.51 (2.05–16.22) | < .001 | 5.11 (1.61–16.2) | .006 |
| General anesthesia within 30 days | 7 | 6 | 3.94 (1.02–15.8) | .04 | ||
| Chemotherapy within 30 days | 2 | 11 | 0.48 (0.05–2.43) | .51 | ||
| Radiation within 30 days | 1 | 3 | 0.94 (0.02–12.29) | >.99 | ||
| Immunosuppressants within 30 days | 14 | 21 | 2.64 (1.01–6.93) | .04 | ||
| Intensive care unit admission before infection | 8 | 10 | 2.70 (0.82–8.70) | .08 | ||
| Source of infection: | ||||||
| Urinary tract | 13 | 49 | 0.56 (0.22–1.41) | .20 | ||
| Intra-abdominal | 10 | 22 | 1.43 (0.51–3.81) | .48 | ||
| Catheter-associated | 2 | 2 | 2.93 (0.20–42.2) | .28 | ||
| Soft-tissue | 1 | 1 | 2.86 (0.04–229.6) | .46 | ||
| Pneumonia | 0 | 4 | 0 (0–4.32) | .57 | ||
| Unknown | 4 | 7 | 1.71 (0.34–7.37) | .47 | ||
| Comorbid condition(s): | ||||||
| Malignancy | 11 | 38 | 0.72 (0.27–1.82) | .52 | ||
| Diabetes mellitus | 8 | 19 | 1.26 (0.42–3.56) | .63 | ||
| Connective tissue disease | 7 | 3 | 8.12 (1.69–52.53) | .003 | ||
| Cerebral vascular disease | 5 | 9 | 1.68 (0.40–6.23) | .52 | ||
| Peripheral vascular disease | 3 | 4 | 2.23 (0.31–14.12) | .37 | ||
| Paraplegia or hemiplegia | 6 | 2 | 10.11 (1.67–108.70) | .004 | ||
| Dementia | 6 | 1 | 20.3 (2.30–971.50) | .001 | ||
| Cardiovascular disease | 5 | 15 | 0.93 (0.24–3.08) | >.99 | ||
| Chronic liver disease | 4 | 13 | 0.85 (0.19–3.10) | >.99 | ||
| Renal insufficiency | 4 | 13 | 0.85 (0.19–3.10) | >.99 | ||
| Chronic pulmonary disease | 5 | 8 | 1.91 (0.45–7.37) | .32 | ||
| Leukemia | 4 | 0 | Inf (1.99–Inf) | .004 | ||
| Lymphoma | 2 | 2 | 2.93 (0.20–42.19) | .28 | ||
| Peptic ulcer | 2 | 0 | Inf (0.54–Inf) | .07 | ||
| Charlson comorbidity index, mean (SD) | 4.2 (2.2) | 2.7 (2.1) | 1.34 (1.11–1.62) | .003 | ||
| Charlson comorbidity index >2 | 21 | 33 | 3.63 (1.39–10.18) | .005 | ||
| Indwelling devices: | ||||||
| Peripheral catheterization | 10 | 17 | 1.99 (0.70–5.50) | .21 | ||
| Urinary catheterization | 10 | 11 | 3.32 (1.10–10.07) | .03 | ||
| Oxygen inhalation | 7 | 11 | 2.05 (0.60–6.56) | .24 | ||
| Central venous catheter | 7 | 4 | 6.04 (1.39–30.70) | .007 | ||
| Drainage tube | 2 | 6 | 0.94 (0.09–5.66) | >.99 | ||
| Tracheotomy tube | 2 | 2 | 2.93 (0.20–42.19) | .28 | ||
| Nasogastric tube | 2 | 2 | 2.93 (0.20–42.19) | .28 | ||
| Mechanical ventilation | 2 | 2 | 2.963(0.20–42.19) | .28 | ||
| Continuous hemodiafiltration | 1 | 1 | 2.86 (0.04–229.6) | .46 | ||
ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli; OR, odds ratio; CI, confidential interval; IQR, interquartile range; SD, standard deviation; CCI, Charlson comorbidity index; Inf, infinity.
Univariate analysis of risk factors for all-cause mortality within 14 days after onset of bacteremia due to E. coli.
| Variables | Survived (n = 105) | Died (n = 10) | OR | 95% CI | |
|---|---|---|---|---|---|
| Sex: male | 50 | 6 | 1.53 | 0.43–5.41 | .51 |
| Intensive care unit after infection | 17 | 4 | 2.91 | 0.82–10.33 | .08 |
| Inadequate antibiotic therapy within 24 h | 9 | 5 | 9.11 | 2.63–31.55 | < .001 |
| Community-onset infection | 51 | 3 | 0.55 | 0.14–2.15 | .38 |
| Healthcare-associated infection | 38 | 2 | 0.53 | 0.11–2.48 | .41 |
| Nosocomial infection | 54 | 7 | 1.80 | 0.47–6.99 | .38 |
| Nursing home-associated infection | 7 | 2 | 2.80 | 0.59–13.19 | .17 |
| Antibiotic(s) used within 30 days: | |||||
| Any antibiotic | 41 | 9 | 10.93 | 1.38–86.3 | .004 |
| Any carbapenem | 11 | 5 | 6.18 | 1.79–21.4 | < .001 |
| Any quinolone | 7 | 1 | 1.52 | 0.19–12.0 | .69 |
| Immunosuppressant used within 30 days | 30 | 5 | 2.18 | 0.63–7.52 | .21 |
| General anesthesia within 30 days | 12 | 1 | 0.79 | 0.10–6.22 | .82 |
| Chemotherapy within 30 days | 11 | 2 | 1.84 | 0.39–8.68 | .43 |
| Radiation within 30 days | 4 | 0 | <0.001 | 0–Inf | .52 |
| Intensive care unit admission | 16 | 2 | 1.21 | 0.26–5.68 | .81 |
| Source of infection: | |||||
| Urinary tract | 60 | 2 | 0.21 | 0.046–1.01 | .03 |
| Intra-abdominal | 28 | 4 | 1.71 | 0.48–6.05 | .40 |
| Catheter-associated | 4 | 0 | <0.001 | 0–Inf | .52 |
| Soft-tissue | 1 | 1 | 8.21 | 1.03–65.3 | .02 |
| Pneumonia | 4 | 0 | <0.001 | 0–Inf | .52 |
| Unknown | 8 | 3 | 4.39 | 1.13–17.0 | .02 |
| Comorbid condition(s): | |||||
| Malignancy | 45 | 4 | 0.86 | 0.24–3.04 | .81 |
| Diabetes mellitus | 25 | 2 | 0.83 | 0.18–3.9 | .81 |
| Connective tissue disease | 9 | 1 | 1.07 | 0.14–8.45 | .95 |
| Cerebrovascular disease | 12 | 2 | 1.95 | 0.41–9.19 | .39 |
| Peripheral vascular disease | 7 | 0 | <0.001 | 0–Inf | .39 |
| Paraplegia or hemiplegia | 7 | 1 | 1.20 | 0.43–3.36 | .73 |
| Dementia | 7 | 0 | <0.001 | 0–Inf | .39 |
| Cardiovascular disease | 19 | 1 | 0.54 | 0.068–4.26 | .55 |
| Chronic liver disease | 12 | 5 | 6.26 | 1.81–21.7 | < .001 |
| Renal insufficiency | 15 | 2 | 1.46 | 0.31–6.86 | .63 |
| Chronic pulmonary disease | 11 | 2 | 2.10 | 0.45–9.89 | .34 |
| Leukemia | 3 | 1 | 3.55 | 0.45–28.0 | .20 |
| Lymphoma | 4 | 0 | <0.001 | 0–Inf | .52 |
| Peptic ulcer | 2 | 0 | <0.001 | 0–Inf | .65 |
| Indwelling device: | |||||
| Peripheral catheter | 25 | 2 | 0.74 | 0.16–3.50 | .70 |
| Urinary catheter | 17 | 4 | 2.78 | 0.78–9.85 | .10 |
| Oxygen inhalation | 15 | 3 | 2.15 | 0.56–8.31 | .25 |
| Central venous catheter | 8 | 3 | 4.18 | 1.08–16.18 | .02 |
| Drainage tube | 6 | 2 | 3.16 | 0.67–14.87 | .12 |
| Tracheotomy tube | 2 | 2 | 6.50 | 1.38–30.61 | .006 |
| Nasogastric tube | 1 | 3 | 13.17 | 3.39–51.14 | < .001 |
| Mechanical ventilation | 2 | 2 | 6.50 | 1.38–30.61 | < .001 |
| Continuous hemodiafiltration | 1 | 1 | 5.54 | 0.70–43.7 | .07 |
| Empiric treatment with a carbapenem | 43 | 6 | 1.89 | 0.53–6.70 | .31 |
| Carbapenem use after susceptibility test | 66 | 4 | 0.36 | 0.10–1.27 | .09 |
| Carbapenem use | 68 | 6 | 0.71 | 0.20–2.51 | .59 |
| Age ≥ 65 years | 85 | 6 | 0.36 | 0.10–1.28 | .10 |
| Charlson comorbidity score of > 2 | 47 | 7 | 2.62 | 0.68–10.12 | .15 |
| Age, mean years (SD) | 71.4 (12.1) | 64.1 (19.5) | 0.97 | 0.93–1.01 | .10 |
| Charlson comorbidity index, mean (SD) | 4.3 (3.1) | 3.0 (2.1) | 1.26 | 0.97–1.62 | .08 |
| ESBL-only-EC | 23 | 4 | 2.36 | 0.45–10.94 | .24 |
| ESBL-EC | 24 | 6 | 4.97 | 1.08–26.01 | .02 |
| ESBL/IMP-6-EC | 1 | 2 | 24.17 | 1.15–1527.7 | .02 |
OR, odds ratio; CI, confidential interval; SD, standard deviation; ESBL-only-EC, extended-spectrum beta-lactamase-producing only E. coli; ESBL-EC, extended-spectrum beta-lactamase-producing E. coli; non-ESBL-EC, non-extended-spectrum beta-lactamase-producing E. coli