| Literature DB >> 30154670 |
Yu-Jiao Wu1, Xin Yang2, Ting-di Chen3, Zhi-Xin Zhang4, Yi-Zhong You5, Zheng-da Fan1.
Abstract
BACKGROUND: Evidence suggests that genetic variations of exon 1 of mannose-binding lectin 2 (MBL2) may contribute to tuberculosis (TB) risk. Many studies have investigated the association between MBL2 exon 1 polymorphisms (rs1800450, rs1800451, and rs5030737) and TB risk, but yielded inconclusive results.Entities:
Keywords: MBL2; polymorphisms; rs1800450; rs1800451; rs5030737; tuberculosis
Year: 2018 PMID: 30154670 PMCID: PMC6108403 DOI: 10.2147/IDR.S168465
Source DB: PubMed Journal: Infect Drug Resist ISSN: 1178-6973 Impact factor: 4.003
Figure 1PRISMA flowchart. The flow diagram of included and excluded studies.
Abbreviations: MBL2, mannose-binding lectin 2; HWE, Hardy–Weinberg equilibrium.
Characteristics of eligible studies
| Study | Year | Country | Ethnicity | Control | Genotyping method | Type | Cases
| Controls
| HIV | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AA | AO | OO | AA | AO | OO | ||||||||
| Bellamy et al | 1998 | Gambia | African | HB | PCR-SSP | PTB | 198 | 166 | 33 | 183 | 197 | 42 | – |
| Selvaraj et al | 1999 | India | Asian | H/N/WB | PCR-SSP | PTB | 107 | 73 | 22 | 68 | 39 | 2 | ND |
| Ozbas-Gerceker et al | 2003 | Turkey | Caucasian | PB | PCR-SSP | PTB | 40 | 9 | 0 | 76 | 20 | 4 | – |
| Soborg et al | 2003 | Denmark | Mixed | PB | PCR-SSP | TB | 142 | 60 | 16 | 157 | 86 | 7 | – |
| Fitness et al | 2004 | Malawi | African | PB | PCR-RFLP | PTB | 205 | 105 | 12 | 362 | 160 | 24 | – |
| Garcia-Laorden et al | 2006 | Spain | Caucasian | HB | PCR-RFLP | TB | 144 | 79 | 10 | 183 | 134 | 27 | + |
| Selvaraj et al | 2006 | India | Asian | HB | PCR-SSP | PTB | 24 | 19 | 5 | 37 | 18 | 3 | – |
| Liu et al | 2007 | China | Asian | PB | PCR-SSP | PTB | 103 | 34 | 4 | 166 | 42 | 4 | – |
| Alagarasu et al | 2007 | India | Asian | PB | PCR-SSP | PTB, EPTB | 145 | 87 | 25 | 86 | 53 | 7 | +/− |
| Cosar et al | 2008 | Turkey | Caucasian | HB | PCR-RFLP | PTB, EPTB | 40 | 4 | 0 | 71 | 27 | 1 | – |
| Li | 2009 | China | Asian | PB | PCR-SSP | PTB | 79 | 56 | 6 | 106 | 38 | 8 | – |
| Capparelli et al | 2009 | Italy | Caucasian | H/N/WB | PCR-RFLP | PTB | 55 | 158 | 61 | 166 | 112 | 10 | – |
| Li et al | 2011 | China | Asian | PB | Pyrosequencing | PTB | 171 | 57 | 3 | 186 | 37 | 3 | – |
| Fang and Yin | 2011 | China | Asian | HB | PCR-SSP | PTB | 75 | 25 | 0 | 74 | 25 | 1 | – |
| Thye et al | 2011 | Ghana | African | H/N/WB | PCR-SSP | PTB | 887 | 814 | 193 | 1002 | 977 | 257 | – |
| Singla et al | 2012 | India | Asian | PB | PCR-RFLP | PTB, EPTB | 218 | 126 | 13 | 207 | 155 | 30 | – |
| Zhou and Zhang | 2012 | China | Asian | PB | PCR-SSP | PTB | 106 | 106 | 14 | 146 | 80 | 5 | – |
| Ocejo-Vinyals et al | 2012 | Spain | Caucasian | PB | PCR-SSP | PTB | 74 | 31 | 2 | 272 | 146 | 23 | – |
| Da et al | 2013 | Brazil | Caucasian | PB | Sequencing | PTB, EPTB | 92 | 55 | 8 | 108 | 34 | 6 | – |
| Araujo et al | 2013 | Brazil | Caucasian | HB | PCR-SSP | PTB, EPTB | 102 | 62 | 3 | 101 | 56 | 2 | – |
| Garcia-Gasalla et al | 2014 | Spain | Caucasian | H/N/WB | PCR-SSP | PTB, EPTB | 48 | 24 | 4 | 72 | 33 | 1 | – |
| Zhao et al | 2014 | China | Asian | PB | PCR-RFLP | PTB | 520 | 279 | 101 | 514 | 303 | 53 | – |
| Wu et al | 2015 | China | Asian | HB | PCR-SSP | PTB | 112 | 37 | 2 | 348 | 97 | 8 | – |
| Liu et al | 2016 | China | Asian | HB | PCR-SSP | PTB | 100 | 36 | 6 | 96 | 22 | 2 | – |
| Liu et al | 2016 | China | Asian | PB | PCR-RFLP | PTB | 645 | 345 | 30 | 748 | 258 | 14 | – |
| Amiri et al | 2017 | Iran | Asian | PB | PCR-SSP | PTB | 69 | 29 | 2 | 72 | 27 | 1 | – |
Note: Mixed=Caucasian/Asian/Africans/Inuits.
Abbreviations: PB, population-based; HB, hospital-based; H/N/WB, household/neighboring/working contacts; PCR-SSP, polymerase chain reaction–sequence-specific primers; PCR-RFLP, polymerase chain reaction–restrictive fragment length polymorphism; TB, tuberculosis; PTB, pulmonary tuberculosis; EPTB, extrapulmonary tuberculosis; HIV, human immunodeficiency virus; ND, not mentioned.
Meta-analysis results
| Subgroups | N | O vs A
| OO vs AA
| AO vs AA
| AO/OO vs AA
| OO vs AO/AA
| |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | |||||||
| Total | 26 | 85.8 | 79.1 | 1.17 (0.99–1.37) | 78.7 | 83.5 | 1.35 (0.98–1.86) | 70.7 | |||
| Ethnicity | |||||||||||
| Asian | 14 | 66.0 | 54.2 | 62.9 | 64.2 | 48.0 | |||||
| Caucasian | 9 | 1.04 (0.64–1.70) | 91.8 | 1.47 (0.43–4.96) | 86.5 | 1.08 (0.66–1.77) | 87.2 | 1.08 (0.62–1.90) | 90.9 | 1.34 (0.51–3.48) | 78.1 |
| African | 3 | 0.93 (0.84–1.02) | 15.3 | 0.83 (0.69–1.00) | 0.0 | 0.94 (0.79–1.12) | 43.0 | 0.92 (0.78–1.09) | 42.1 | 0.86 (0.72–1.03) | 0.0 |
| TB types | |||||||||||
| PTB | 24 | 85.7 | 79.2 | 77.8 | 83.2 | 1.40 (1.00–1.97) | 69.8 | ||||
| EPTB | 5 | 0.86 (0.49–1.50) | 65.7 | 0.65 (0.25–1.64) | 0.0 | 0.87 (0.43–1.79) | 68.8 | 0.97 (0.30–3.06) | 89.9 | 0.51 (0.20–1.27) | 0.0 |
| Source of control | |||||||||||
| PB | 14 | 72.3 | 1.36 (0.92–2.03) | 59.0 | 1.18 (0.98–1.43) | 71.0 | 1.20 (1.00–1.44) | 71.8 | 1.26 (0.87–1.84) | 54.7 | |
| HB | 8 | 0.98 (0.76–1.25) | 63.4 | 0.79 (0.53–1.18) | 5.7 | 0.96 (0.75–1.24) | 50.7 | 0.96 (0.73–1.27) | 60.7 | 0.83 (0.58–1.19) | 0.0 |
| H/N/WB | 4 | 1.64 (0.77–3.49) | 96.9 | 4.88 (0.65–36.84) | 95.8 | 1.51 (0.71–3.25) | 94.2 | 1.74 (0.71–4.27) | 96.2 | 3.48 (0.74–16.30) | 93.1 |
| Genotyping method | |||||||||||
| PCR-SSP | 17 | 84.2 | 76.6 | 1.24 (0.99–1.55) | 77.6 | 83.0 | 63.5 | ||||
| PCR-RFLP | 7 | 0.98 (0.76–1.28) | 80.6 | 0.91 (0.48–1.70) | 74.6 | 0.99 (0.75–1.29) | 71.8 | 0.98 (0.74–1.30) | 76.0 | 0.91 (0.49–1.67) | 73.6 |
| Others | 2 | 1.18 (0.69–2.02) | 85.0 | 0.90 (0.63–1.29) | 13.9 | 1.28 (0.65–2.53) | 85.4 | 1.25 (0.64–2.47) | 86.6 | 0.88 (0.73–1.07) | 0.0 |
| Sample size | |||||||||||
| Large | 5 | 1.08 (0.88–1.33) | 88.1 | 1.19 (0.75–1.89) | 83.2 | 1.04 (0.83–1.31) | 83.9 | 1.07 (0.84–1.35) | 86.0 | 1.20 (0.78–1.85) | <0.0001 |
| Small | 21 | 1.20 (0.96–1.50) | 84.8 | 1.59 (0.88–2.86) | 77.1 | 1.20 (0.96–1.51) | 77.2 | 1.23 (0.96–1.58) | 82.9 | 1.41 (0.87–2.30) | <0.0001 |
Notes: OR with statistical significance is shown in bold.
studies with >800 participants;
studies with <800 participants.
Abbreviations: PB, population-based; HB, hospital-based; H/N/WB, household/neighboring/working contacts; TB, tuberculosis; PTB, pulmonary tuberculosis; EPTB, extrapulmonary tuberculosis; PCR-SSP, polymerase chain reaction–sequence-specific primers; PCR-RFLP, polymerase chain reaction–restrictive fragment length polymorphism; OR, odds ratio.
Figure 2Meta-analysis for the association between the MBL2 exon 1 polymorphisms and tuberculosis risk. Forest plot of (A) allele model (O vs A) and (B) dominant model (AO/OO vs AA).
Note: The arrow indicates that the lower limit values of the 95% CI are too low to be shown in the figure.
Abbreviations: MBL2, mannose-binding lectin 2; OR, odds ratio.
Figure 3Sensitivity analysis on (A) all populations and (B) Asians.
Figure 4Funnel plot analysis to detect publication bias. Funnel plot analysis of (A) allele model (O vs A) on all populations; (B) dominant model (AO/OO vs AA) on all populations; (C) allele model (O vs A) on Asians; and (D) dominant model (AO/OO vs AA) on Asians.
Note: The circles represent the weight of individual study.
Abbreviations: SE, standard error; OR, odds ratio.