Literature DB >> 30152019

A B7-CD28 family based signature demonstrates significantly different prognoses and tumor immune landscapes in lung adenocarcinoma.

Shanbo Zheng1,2, Xiaoyang Luo1,2, Chuanpeng Dong3,4, Difan Zheng1,2, Juntao Xie1,2, Lingdun Zhuge1,2, Yihua Sun1,2, Haiquan Chen1,2.   

Abstract

B7 family ligands and CD28 family receptors have complicated interaction for modulating immune functions. They play a central role in response to immunotherapy and outcome of patients with lung adenocarcinoma (LUAD). Thus, we analyzed B7-CD28 family gene expression profiles in LUAD and generated a signature to predict prognosis and immune host status. B7-CD28 family gene expression profiles and clinical data of LUAD from The Cancer Genome Atlas (TCGA) were analyzed. In the training cohort, prognostic association was assessed and then a prognostic signature was built with stepwise multivariable Cox analysis. The signature was validated by Kaplan-Meier and multivariable Cox analysis in several published gene expression datasets and a Fudan University cohort. Expression of immune cell populations and other immunotherapy predictors was further investigated. In TCGA LUAD cohort, eight B7-CD28 family genes had prognostic association with p values <0.05. Stepwise regression generated a gene signature including two genes, CD28 and CD276. Signature high-risk cases had worse overall survival (OS) and disease-free survival (DFS) in three published gene expression datasets and a Fudan University validation cohort. The B7-CD28 family based signature also significantly stratified OS and DFS in important clinical subsets, including stage I-II and EGFR mutant subsets. Signature high- and low-risk tumor had significantly different expressions of PD-L1 and tumor infiltrating leukocytes. The B7-CD28 family based signature demonstrates significantly different prognoses and tumor immune landscapes in LUAD. Whether it could serve as potential biomarkers for immunotherapy needs further investigation.
© 2018 UICC.

Entities:  

Keywords:  B7; CD28; TCGA; lung adenocarcinoma; prognostic signature

Mesh:

Substances:

Year:  2018        PMID: 30152019     DOI: 10.1002/ijc.31764

Source DB:  PubMed          Journal:  Int J Cancer        ISSN: 0020-7136            Impact factor:   7.396


  10 in total

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Journal:  Genes (Basel)       Date:  2021-02-15       Impact factor: 4.096

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Journal:  Oncoimmunology       Date:  2020-09-29       Impact factor: 8.110

5.  Seven interferon gamma response genes serve as a prognostic risk signature that correlates with immune infiltration in lung adenocarcinoma.

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6.  Immune Microenvironment Signatures as Biomarkers to Predict Early Recurrence of Stage Ia-b Lung Cancer.

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9.  Multi-omics Data Analyses Construct TME and Identify the Immune-Related Prognosis Signatures in Human LUAD.

Authors:  Yuwei Zhang; Minglei Yang; Derry Minyao Ng; Maria Haleem; Tianfei Yi; Shiyun Hu; Huangkai Zhu; Guofang Zhao; Qi Liao
Journal:  Mol Ther Nucleic Acids       Date:  2020-07-23       Impact factor: 8.886

10.  Heat shock factor 5 correlated with immune infiltration serves as a prognostic biomarker in lung adenocarcinoma.

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  10 in total

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